- Transcript 'KH2012:KH.C9.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v1.A.SL4-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,555 / 3,520,894]
Amino acid sequence
Length: 329
>KH.C9.13.v1.A.SL4-1
NMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKTGYPLITCRQALQASGYN
VEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLIVEVNCQTDFVAKTKEFQ
SLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIEDTVAITIGKLKEKIEIRR
ASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPTDENTGKSSIKMAGRDIA
QHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDESSHELLKQPFLLDSSIS
VAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,362
>KH2012:KH.C9.13.v1.A.SL4-1
AAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCTGGCTGTCGTTTATG
GTTCAGTACCGGAGAACCAAACAAAGAAGTGAATACAAAACAAGTTTTAATGGAGTTACG
GCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAGGCGTCAGGTTATAA
CGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAAGGTTGGAACACGAT
GCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTAACGAATAAAAATAA
TGGATTAATTGTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAAACCAAAGAATTTCA
AAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGATGTTTATTCAACCCAACAACCTTC
CAAGATTGATTTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCTGGAAAGAAACAAAC
TATTGAAGATACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAAATTGAAATTCGCCG
AGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCTCGCTGTTTACATTCATCCGAGCGT
CCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGGGCCATGGTGTCACT
TTCACCAACTGATGAGAATACTGGAAAGTCCTCCATCAAAATGGCTGGCAGAGATATTGC
GCAACATATAGTTGGAATGAACCCATCATGTATTGGAACATGCTTAAAACCAACCCCAAA
TAAAAGCGTGACGGACTCCACACCAGATGATGACGTTATTAACCCTCCAGAAATGCTTAG
TCCAGATGAATCAAGTCATGAACTACTTAAACAACCATTTCTTTTAGACAGTTCTATCTC
AGTGGCTCATTGGTTGAATTATCACCAACTAAACGTGAACGATTTTATTCGTTTTCAAGT
CGGAGAGAAAACGAAATCTGCCGAGAAATAATTTAAAGTTAAAAATCATGAAGATAGGGC
TGGATACAGTTAAGTGTATGATGGAAAAATGATGTTGCTAATTTCAGCTCATTACAGATT
GGTTTCATCATTGTGTTTTTTCAACTTGATGCTTATGCTGTTAATACAAGTTTTTTAAAC
ATAGGCAAGCAAGTAGAAAAGTATAATTAAATTATATAACTGTAAAAGGGCATGTATTTT
AAAATATCATCATCATATAGTAGGGTGGAAAAAGATGGGACACTTTTTCTTGTCCCATTT
GGTAGTAAACAAAGTACATTCGTTATAAAACCATGTTTTTACGACTCTAATAGACTGTTG
TTAACCGTTTGCAAGAATTACAACACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[8-327] 6.1E-73 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[32-77] 3.32E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[32-329] 20.43 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[88-122] 4.14E-21 - T[236-322] 4.14E-21 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[88-202] 3.0E-28 - T[208-329] 4.8E-25 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[101-251] 8.2E-25 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[105-115] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 32.11 % | 157 | 1.96E-45 |