- Transcript 'KH2012:KH.C9.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v1.A.SL2-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,484 / 3,520,894]
Amino acid sequence
Length: 347
>KH.C9.13.v1.A.SL2-1
LIYWRSVIELIVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRK
TGYPLITCRQALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGL
IVEVNCQTDFVAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIE
DTVAITIGKLKEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSP
TDENTGKSSIKMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPD
ESSHELLKQPFLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,433
>KH2012:KH.C9.13.v1.A.SL2-1
GTAAACGTATTAGGTTAACTTATTTATTGGCGTTCTGTAATCGAATTAATCGTTGTTTGG
AATAAAACAAGAAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCTGGC
TGTCGTTTATGGTTCAGTACCGGAGAACCAAACAAAGAAGTGAATACAAAACAAGTTTTA
ATGGAGTTACGGCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAGGCG
TCAGGTTATAACGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAAGGT
TGGAACACGATGCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTAACG
AATAAAAATAATGGATTAATTGTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAAACC
AAAGAATTTCAAAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGATGTTTATTCAACC
CAACAACCTTCCAAGATTGATTTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCTGGA
AAGAAACAAACTATTGAAGATACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAAATT
GAAATTCGCCGAGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCTCGCTGTTTACATT
CATCCGAGCGTCCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGGGCC
ATGGTGTCACTTTCACCAACTGATGAGAATACTGGAAAGTCCTCCATCAAAATGGCTGGC
AGAGATATTGCGCAACATATAGTTGGAATGAACCCATCATGTATTGGAACATGCTTAAAA
CCAACCCCAAATAAAAGCGTGACGGACTCCACACCAGATGATGACGTTATTAACCCTCCA
GAAATGCTTAGTCCAGATGAATCAAGTCATGAACTACTTAAACAACCATTTCTTTTAGAC
AGTTCTATCTCAGTGGCTCATTGGTTGAATTATCACCAACTAAACGTGAACGATTTTATT
CGTTTTCAAGTCGGAGAGAAAACGAAATCTGCCGAGAAATAATTTAAAGTTAAAAATCAT
GAAGATAGGGCTGGATACAGTTAAGTGTATGATGGAAAAATGATGTTGCTAATTTCAGCT
CATTACAGATTGGTTTCATCATTGTGTTTTTTCAACTTGATGCTTATGCTGTTAATACAA
GTTTTTTAAACATAGGCAAGCAAGTAGAAAAGTATAATTAAATTATATAACTGTAAAAGG
GCATGTATTTTAAAATATCATCATCATATAGTAGGGTGGAAAAAGATGGGACACTTTTTC
TTGTCCCATTTGGTAGTAAACAAAGTACATTCGTTATAAAACCATGTTTTTACGACTCTA
ATAGACTGTTGTTAACCGTTTGCAAGAATTACAACACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[26-345] 7.1E-73 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[50-347] 20.43 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[50-95] 3.83E-7 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[106-140] 4.87E-21 - T[254-340] 4.87E-21 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[106-220] 3.3E-28 - T[226-347] 5.4E-25 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[119-269] 9.3E-25 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[123-133] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 32.11 % | 157 | 2.97E-45 |