- Transcript 'KH2012:KH.C9.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v1.A.nonSL8-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,531 / 3,520,894]
Amino acid sequence
Length: 337
>KH.C9.13.v1.A.nonSL8-1
IVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKTGYPLITCRQ
ALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLIVEVNCQTDF
VAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIEDTVAITIGKL
KEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPTDENTGKSSI
KMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDESSHELLKQP
FLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,386
>KH2012:KH.C9.13.v1.A.nonSL8-1
AATCGTTGTTTGGAATAAAACAAGAAACATGCTTCGATTTTCTGTTCTACTGCGGAGGTC
AAATTTATCTGGCTGTCGTTTATGGTTCAGTACCGGAGAACCAAACAAAGAAGTGAATAC
AAAACAAGTTTTAATGGAGTTACGGCGTAAAACAGGCTATCCGTTAATAACTTGTCGCCA
AGCTCTGCAGGCGTCAGGTTATAACGTGGAAAAGGCAAAAGAACATTTGTTACAACTCGC
AAAAGAGAAAGGTTGGAACACGATGCAGATGGACGGGGGGGTGCTGAAAGAAGGATTAAT
ATCAGTTGTAACGAATAAAAATAATGGATTAATTGTTGAGGTGAACTGCCAAACAGATTT
TGTTGCAAAAACCAAAGAATTTCAAAGTTTAGTAAAAGATGCAGCTCAAACATTACTTGA
TGTTTATTCAACCCAACAACCTTCCAAGATTGATTTGAATCCACCTGAACTTCTGAAGTT
GGTGGTTTCTGGAAAGAAACAAACTATTGAAGATACTGTGGCTATTACTATTGGCAAACT
AAAGGAGAAAATTGAAATTCGCCGAGCTTCGTTGCTATCCGTCCCAACCAATTCCATTCT
CGCTGTTTACATTCATCCGAGCGTCCTCATCTCAAAAACTCGGCCAGGATCTACTTTAGG
AAGTTATGGGGCCATGGTGTCACTTTCACCAACTGATGAGAATACTGGAAAGTCCTCCAT
CAAAATGGCTGGCAGAGATATTGCGCAACATATAGTTGGAATGAACCCATCATGTATTGG
AACATGCTTAAAACCAACCCCAAATAAAAGCGTGACGGACTCCACACCAGATGATGACGT
TATTAACCCTCCAGAAATGCTTAGTCCAGATGAATCAAGTCATGAACTACTTAAACAACC
ATTTCTTTTAGACAGTTCTATCTCAGTGGCTCATTGGTTGAATTATCACCAACTAAACGT
GAACGATTTTATTCGTTTTCAAGTCGGAGAGAAAACGAAATCTGCCGAGAAATAATTTAA
AGTTAAAAATCATGAAGATAGGGCTGGATACAGTTAAGTGTATGATGGAAAAATGATGTT
GCTAATTTCAGCTCATTACAGATTGGTTTCATCATTGTGTTTTTTCAACTTGATGCTTAT
GCTGTTAATACAAGTTTTTTAAACATAGGCAAGCAAGTAGAAAAGTATAATTAAATTATA
TAACTGTAAAAGGGCATGTATTTTAAAATATCATCATCATATAGTAGGGTGGAAAAAGAT
GGGACACTTTTTCTTGTCCCATTTGGTAGTAAACAAAGTACATTCGTTATAAAACCATGT
TTTTACGACTCTAATAGACTGTTGTTAACCGTTTGCAAGAATTACAACACGATTAGGATA
TTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[16-335] 6.4E-73 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[40-85] 3.57E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[40-337] 20.43 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[96-130] 4.43E-21 - T[244-330] 4.43E-21 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[96-210] 3.1E-28 - T[216-337] 5.1E-25 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[109-259] 8.7E-25 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[113-123] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 32.11 % | 157 | 2.38E-45 |