- Transcript 'KH2012:KH.C9.13.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C9.13.v1.A.nonSL5-1
Possible name(s)
TSFM
Gene model
Location
KhC9 [3,515,505 / 3,520,894]
Amino acid sequence
Length: 346
>KH.C9.13.v1.A.nonSL5-1
IYWRSVIELIVVWNKTRNMLRFSVLLRRSNLSGCRLWFSTGEPNKEVNTKQVLMELRRKT
GYPLITCRQALQASGYNVEKAKEHLLQLAKEKGWNTMQMDGGVLKEGLISVVTNKNNGLI
VEVNCQTDFVAKTKEFQSLVKDAAQTLLDVYSTQQPSKIDLNPPELLKLVVSGKKQTIED
TVAITIGKLKEKIEIRRASLLSVPTNSILAVYIHPSVLISKTRPGSTLGSYGAMVSLSPT
DENTGKSSIKMAGRDIAQHIVGMNPSCIGTCLKPTPNKSVTDSTPDDDVINPPEMLSPDE
SSHELLKQPFLLDSSISVAHWLNYHQLNVNDFIRFQVGEKTKSAEK
Nucleotide sequence
Length: 1,412
>KH2012:KH.C9.13.v1.A.nonSL5-1
ATTTATTGGCGTTCTGTAATCGAATTAATCGTTGTTTGGAATAAAACAAGAAACATGCTT
CGATTTTCTGTTCTACTGCGGAGGTCAAATTTATCTGGCTGTCGTTTATGGTTCAGTACC
GGAGAACCAAACAAAGAAGTGAATACAAAACAAGTTTTAATGGAGTTACGGCGTAAAACA
GGCTATCCGTTAATAACTTGTCGCCAAGCTCTGCAGGCGTCAGGTTATAACGTGGAAAAG
GCAAAAGAACATTTGTTACAACTCGCAAAAGAGAAAGGTTGGAACACGATGCAGATGGAC
GGGGGGGTGCTGAAAGAAGGATTAATATCAGTTGTAACGAATAAAAATAATGGATTAATT
GTTGAGGTGAACTGCCAAACAGATTTTGTTGCAAAAACCAAAGAATTTCAAAGTTTAGTA
AAAGATGCAGCTCAAACATTACTTGATGTTTATTCAACCCAACAACCTTCCAAGATTGAT
TTGAATCCACCTGAACTTCTGAAGTTGGTGGTTTCTGGAAAGAAACAAACTATTGAAGAT
ACTGTGGCTATTACTATTGGCAAACTAAAGGAGAAAATTGAAATTCGCCGAGCTTCGTTG
CTATCCGTCCCAACCAATTCCATTCTCGCTGTTTACATTCATCCGAGCGTCCTCATCTCA
AAAACTCGGCCAGGATCTACTTTAGGAAGTTATGGGGCCATGGTGTCACTTTCACCAACT
GATGAGAATACTGGAAAGTCCTCCATCAAAATGGCTGGCAGAGATATTGCGCAACATATA
GTTGGAATGAACCCATCATGTATTGGAACATGCTTAAAACCAACCCCAAATAAAAGCGTG
ACGGACTCCACACCAGATGATGACGTTATTAACCCTCCAGAAATGCTTAGTCCAGATGAA
TCAAGTCATGAACTACTTAAACAACCATTTCTTTTAGACAGTTCTATCTCAGTGGCTCAT
TGGTTGAATTATCACCAACTAAACGTGAACGATTTTATTCGTTTTCAAGTCGGAGAGAAA
ACGAAATCTGCCGAGAAATAATTTAAAGTTAAAAATCATGAAGATAGGGCTGGATACAGT
TAAGTGTATGATGGAAAAATGATGTTGCTAATTTCAGCTCATTACAGATTGGTTTCATCA
TTGTGTTTTTTCAACTTGATGCTTATGCTGTTAATACAAGTTTTTTAAACATAGGCAAGC
AAGTAGAAAAGTATAATTAAATTATATAACTGTAAAAGGGCATGTATTTTAAAATATCAT
CATCATATAGTAGGGTGGAAAAAGATGGGACACTTTTTCTTGTCCCATTTGGTAGTAAAC
AAAGTACATTCGTTATAAAACCATGTTTTTACGACTCTAATAGACTGTTGTTAACCGTTT
GCAAGAATTACAACACGATTAGGATATTTAAA
| PANTHER |
Transl_elong_EFTs/EF1B (IPR001816) - T[25-344] 7.0E-73 |
| SUPERFAMILY |
UBA-like_sf (IPR009060) - T[49-94] 3.57E-7 |
| Hamap |
Transl_elong_EFTs/EF1B (IPR001816) - T[49-346] 20.43 |
| SUPERFAMILY |
EF-Ts_dimer_sf (IPR036402) - T[105-139] 4.87E-21 - T[253-339] 4.87E-21 |
| Gene3D |
EF-Ts_dimer_sf (IPR036402) - T[105-219] 3.3E-28 - T[225-346] 5.4E-25 |
| Pfam |
Transl_elong_EFTs/EF1B_dimer (IPR014039) - T[118-268] 9.2E-25 |
| ProSitePatterns |
Transl_elong_Ts_CS (IPR018101) - T[122-132] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFTS_HUMAN | 32.11 % | 157 | 2.72E-45 |