- Transcript 'KH2012:KH.C8.890.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.890.v1.A.SL1-1
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
KhC8 [2,631,041 / 2,633,064]
Amino acid sequence
Length: 599
>KH.C8.890.v1.A.SL1-1
DSKKKAVAGRIEEVDLNKLSRFAKCSFIFQHRIRCVMMTVQCCVQYNTSEDKSDHKRFMM
NRIESHGASRDNVIGSIYPQQQADAILQNWKSSAAGPTRNKHRDGESRSPVPGKPYQPPN
ATKSLNEMSAIECMKNAVQQMQEKVQAPAAKTTQHLALNDTYVDVTSLSSPATLVRESFR
QNWLPKSPTVDERSSSPVSSEGNPPAHCASSSGEDESREKDEELRKIGEEMEEYSNESKK
NVKPPYSYIALITMSILQSPDKKLTLSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDC
FVKIPREPGNPGKGNYWTMDPEAEDMFDNGSFLRRRKRFKRQQRDPFRDNVLAASMNAAS
PYGRPYGLAATQQAAIMAASMNPYAYMNPLPAHIPLLPPHEINNRQAALMAFGSSRLPQM
TTNHLFPSSPPFPCNPTLSTDARIQAANFANAVALHSARESVRGQQQAKKLPRNSPFSIE
SLIGKSSDSAPTTSEHHGSGCSSPSSQTSGRENPVSPVSKLNPDSVPVSLRLRSTPDQIG
SLFSEKQEDEKSKSDLPQQNPTSRTPLPLLTHIPQCYHAITGVHSTPNHPTVSSPQFQH
Nucleotide sequence
Length: 1,913
>KH2012:KH.C8.890.v1.A.SL1-1
ATCTGTTTGCTTATAATTGATAAACAATTGATCTGTTGCTGATCAACGGAATTATAAACG
AGATCTAGGATTCGAAGAAAAAAGCGGTTGCTGGGAGAATTGAAGAAGTGGATTTGAATA
AATTGTCGCGTTTTGCAAAGTGCTCGTTCATATTTCAGCATCGAATCCGTTGTGTGATGA
TGACAGTGCAGTGTTGTGTGCAATACAATACAAGCGAGGATAAGAGTGATCATAAACGTT
TCATGATGAATCGTATTGAATCTCACGGAGCATCACGAGATAATGTCATCGGTTCAATCT
ACCCTCAACAACAAGCAGACGCCATTTTGCAAAACTGGAAATCATCGGCGGCAGGCCCGA
CTCGAAACAAACATCGTGACGGGGAATCAAGGTCGCCGGTCCCGGGCAAACCTTATCAAC
CACCCAATGCCACTAAGTCACTAAATGAGATGTCAGCCATAGAATGCATGAAAAATGCAG
TTCAACAAATGCAGGAAAAAGTTCAAGCTCCAGCGGCAAAAACAACCCAACATTTAGCTT
TGAACGATACCTACGTAGACGTGACGTCATTGTCGTCACCAGCCACCCTTGTACGAGAGT
CGTTTCGCCAAAACTGGTTGCCGAAATCACCAACGGTGGACGAACGGTCTTCGTCGCCTG
TGTCGTCAGAGGGAAACCCCCCTGCGCACTGTGCGTCATCAAGCGGCGAAGATGAGTCGA
GAGAAAAGGATGAAGAATTGAGAAAGATCGGAGAAGAAATGGAAGAATATTCGAACGAAT
CAAAGAAGAATGTAAAACCTCCGTATTCATACATCGCTCTTATAACAATGTCGATACTTC
AGTCTCCCGATAAGAAACTTACTCTGAGTGGGATTTGCGATTTCATCATGAACCGCTTCC
CTTATTACAAAGAGAAGTTCCCTGCTTGGCAGAACTCGATACGTCATAACCTTTCACTGA
ACGACTGCTTCGTGAAAATTCCACGCGAGCCTGGTAACCCTGGAAAGGGAAATTACTGGA
CCATGGATCCTGAGGCGGAAGATATGTTCGACAATGGTTCCTTTCTACGAAGAAGAAAAC
GATTTAAACGACAACAGAGAGATCCGTTTCGGGATAATGTCCTTGCAGCTTCAATGAATG
CAGCTAGTCCTTACGGTCGTCCATACGGTCTTGCAGCAACACAACAAGCAGCTATCATGG
CAGCATCAATGAATCCATATGCTTACATGAACCCACTGCCTGCACATATACCGTTGCTAC
CTCCGCATGAAATCAACAACAGACAAGCTGCTTTGATGGCTTTTGGATCATCAAGGTTAC
CTCAGATGACGACGAATCATCTTTTTCCATCTTCCCCACCCTTCCCATGCAATCCAACAC
TGAGCACGGATGCGAGAATCCAAGCCGCGAACTTCGCTAACGCTGTTGCTCTTCACTCCG
CTAGAGAATCTGTTAGAGGGCAGCAACAAGCCAAAAAACTTCCCCGTAATTCTCCTTTCT
CCATCGAATCCTTGATCGGAAAGTCCTCTGACTCTGCTCCCACAACATCCGAACACCACG
GCTCCGGATGTTCTTCTCCTTCCTCCCAAACCTCCGGAAGAGAGAACCCGGTTTCTCCCG
TTTCAAAACTCAACCCGGATTCGGTCCCTGTATCACTTCGACTCCGAAGTACTCCGGATC
AAATCGGGAGTCTTTTTTCAGAGAAACAGGAAGACGAGAAGAGCAAGTCCGATCTTCCTC
AACAGAATCCAACCAGTCGAACCCCCTTACCCCTCCTCACCCATATCCCTCAGTGTTACC
ATGCTATAACAGGGGTCCATTCTACGCCCAACCACCCAACAGTTTCTTCCCCACAGTTCC
AACATTAGACACTCTCGCACAATTCGCTTCATTAGCACAACATCCCGGATACA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[229-338] 1.4E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[241-331] 1.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[242-337] 3.27E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[243-337] 39.54 |
| Pfam |
Fork_head_dom (IPR001766) - T[243-327] 3.8E-37 |
| CDD |
Fork_head_dom (IPR001766) - T[243-320] 2.13927E-50 |
| PRINTS |
Fork_head_dom (IPR001766) - T[243-256] 8.3E-22 - T[264-281] 8.3E-22 - T[287-304] 8.3E-22 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[287-293] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 65 % | 200 | 5.17E-58 |
| FOXD3_HUMAN | 76.087 % | 202 | 1.63E-58 |
| FOXD1_HUMAN | 87.778 % | 184 | 1.46E-51 |
