- Transcript 'KH2012:KH.C8.87.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C8.87.v1.A.SL1-1
Possible name(s)
SLC6A11; SLC6A12; SLC6A13
Gene model
Location
KhC8 [3,965,688 / 3,971,279]
Amino acid sequence
Length: 615
>KH.C8.87.v1.A.SL1-1
RIPIIYTVLCTKTDMSEKKTDSGETKRETWGGKQEFILALIGYSVGLGNVWRFPYLCYDN
GGGAFLIPYAIFVVLAGIPLFFLEISLGQYTQQSCVKVWSKLVPAMKGIGYGSAVVNFMC
AIYFVLVMSWSVLYFVHSCIPGPLPWTSCGNWWNSEHCVLNANYKGMNATMLQQVSNTSG
FASALHTTPNKTNNTTIYSPENEFWNNYVLRKSDGIENIGSLENWPLILCFFGSWVVIYL
CVFKGARTSGKVVYVTAILPYVMLLILLIRGLTLEGASTGIMFFLRPDFSKLLSSQVWMQ
AGGQIFYSYGICFTVLYAFGSYNPYNNNCYKQSVILASTCSLTSIFASFVVFSIIGHMSF
VQGKDIDAVATSGPGLVFLVYPVGLSLLPAPNLWSVLFFATLFMVGIDTQFAGVESCVTI
FLDLWPNVGKGKYGRELVSAMVCLLFIVLGLPLLTNGGIYIFELFNMYAVSGIALLWLAF
FQSITIGWIYGVDNYYENVKSMIGYYPSPYFKLCYKFFAPGISLFIFIFYCVKYAPLTLG
QYVFPGWANAVGWFLSLTSMLCVPGFFIAEICKSKGSVYQRIRKALNPVVINEKTSRDDV
QCEKRFLEDVRNLAI
Nucleotide sequence
Length: 2,739
>KH2012:KH.C8.87.v1.A.SL1-1
GCGAATACCGATAATATATACTGTATTGTGTACAAAAACTGATATGTCGGAGAAAAAAAC
GGACTCGGGAGAGACAAAGAGAGAAACATGGGGAGGAAAGCAGGAGTTTATCCTGGCTTT
AATTGGCTACTCGGTTGGTCTTGGAAATGTATGGAGGTTTCCTTATCTGTGTTACGATAA
CGGTGGAGGAGCATTTTTAATTCCCTACGCGATTTTCGTTGTATTGGCGGGCATTCCTTT
GTTCTTTCTGGAAATTTCTTTGGGCCAATACACACAACAAAGCTGCGTAAAAGTCTGGAG
CAAACTAGTTCCAGCCATGAAGGGTATCGGGTACGGATCAGCCGTCGTAAACTTTATGTG
CGCTATCTACTTTGTGCTTGTCATGTCATGGTCGGTGCTATACTTTGTGCATTCATGTAT
TCCTGGACCTCTCCCTTGGACATCATGCGGAAATTGGTGGAACTCTGAACATTGTGTTTT
GAATGCAAACTATAAAGGAATGAATGCTACTATGCTTCAGCAGGTTTCAAATACGTCCGG
TTTCGCTTCTGCGCTTCACACCACCCCCAATAAAACCAACAACACGACAATATATTCTCC
TGAAAACGAGTTTTGGAACAATTACGTTTTAAGAAAATCGGATGGAATTGAAAATATTGG
CAGTTTAGAAAACTGGCCGCTTATTCTTTGCTTTTTTGGTTCCTGGGTCGTCATCTACTT
ATGTGTCTTCAAGGGCGCGAGGACCAGTGGAAAAGTTGTTTACGTCACTGCGATTTTGCC
ATACGTCATGCTTCTTATTCTACTGATTCGTGGATTGACGTTGGAGGGGGCATCAACAGG
GATCATGTTTTTCCTAAGACCAGACTTCTCAAAGCTTCTATCATCTCAGGTTTGGATGCA
GGCTGGAGGACAAATCTTTTATTCATACGGAATCTGCTTTACAGTCCTATACGCATTCGG
CAGCTACAATCCATATAACAACAATTGCTACAAGCAATCAGTCATTCTTGCTTCAACATG
CAGCCTGACTTCAATCTTTGCTTCATTTGTTGTTTTTAGCATCATTGGCCACATGTCTTT
TGTGCAAGGGAAAGATATTGATGCCGTAGCCACATCCGGTCCTGGTCTCGTATTCCTTGT
TTATCCAGTTGGTCTCTCACTTTTACCTGCTCCTAATCTGTGGTCCGTTCTTTTCTTTGC
TACCCTGTTTATGGTCGGAATCGATACACAGTTTGCTGGAGTTGAGAGTTGCGTCACCAT
CTTCTTGGACTTGTGGCCCAATGTTGGGAAAGGGAAATATGGACGAGAGCTTGTCTCTGC
GATGGTGTGCCTTCTCTTCATCGTGCTCGGCCTGCCACTACTAACCAACGGAGGAATCTA
TATCTTTGAGCTCTTCAATATGTATGCTGTCAGCGGGATTGCGCTCTTGTGGCTTGCATT
TTTTCAATCTATTACAATCGGGTGGATATACGGTGTCGACAACTACTACGAAAATGTCAA
GTCCATGATCGGCTACTACCCTTCTCCATACTTCAAGCTGTGCTACAAATTCTTTGCGCC
AGGGATTTCTCTGTTCATTTTTATCTTCTACTGCGTCAAGTACGCTCCTTTAACTCTTGG
CCAATATGTGTTCCCGGGTTGGGCAAACGCTGTGGGTTGGTTTTTATCTCTAACGTCTAT
GCTCTGCGTCCCAGGATTCTTTATTGCAGAAATTTGCAAATCGAAAGGTTCAGTATACCA
GCGGATAAGAAAGGCTCTTAACCCTGTGGTTATTAACGAAAAAACTTCGAGAGACGACGT
ACAGTGCGAGAAACGATTTCTGGAGGATGTCCGAAATCTAGCTATTTAAATTGTCGTTGT
TGACGCTGATGGTTTGCTGCTATTTGCAGTAATTGTTTTGCTTTTGTAAAAGAGCATTAA
TTATTGTACAAATTGCTTTCTAAGTTCAGCAATATACTGAAGAGGAATTTCACAAAGTGA
CAACATTTCTAACGGGCTGTTGTTATGTGTGATAAGATGAAATGAGTGTCTAGTTTTTTA
TTGCAACGTTAAACTATAAAAATTCAAACTCGTTTACACATGTAATTCTAAATAATCGTT
AACATATGAAAATTCAAATTTGTTAAAACATTTAACACTAAATAATATATTCGCAGTATT
ATATTATCATTCTAATACTAAATATTATTACTCTTCAATTATTTATCTCATCCCGCATGA
GTCATGAGTGTATCTAACATTTGATCTTGTAGATCTTAATTATACATCTTTATGTTGTAA
TAATTACCTGTGAATTGAATAAACGTAGTCCTACTTTATTTCTTGTTCCAATTATTAATA
ACACTCATACTTATACCCTTGATAAACATATTATACTTTTAGCATAATTTATATAGACAA
AAGCTCATTACCCCAACAGTAATGTCTATATATGTGTATAGTTTTTGTGTAAGAAAATTA
ATTTATGTTTGCTGTATAGCATATGGCAATAACTAGATATTAGAATATAATATTAGGATA
TCTATCCTCAAACATACCTGAGCCAACAGTTTACCAGAAGGGTGTATGCAAAATAACCAA
AAATGTATCTGTATATGATGTCCAATGTTTATAACCTTTAAACTTTAAAGCATTGTAATT
TATGTTTCTAATCAACTGCATGCTTTATTAATAATTACCAAACCAAAAAGTTATGTTGTA
AGAATTAAAAAGTATGTAATTATTAGTTATTACAGTAAA
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[26-576] 95.816 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[27-587] 2.2E-219 |
| Pfam |
Na/ntran_symport (IPR000175) - T[27-573] 3.0E-187 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[27-158] 1.96E-162 - T[199-572] 1.96E-162 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[35-56] 6.4E-69 - T[64-83] 6.4E-69 - T[108-134] 6.4E-69 - T[252-269] 6.4E-69 - T[334-354] 6.4E-69 - T[388-407] 6.4E-69 - T[472-492] 6.4E-69 - T[512-532] 6.4E-69 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[51-65] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 44.503 % | 496 | 7.92E-170 |
| S6A13_HUMAN | 44.154 % | 508 | 1.7E-174 |
| S6A11_HUMAN | 45.184 % | 511 | 2.61E-175 |
