- Transcript 'KH2012:KH.C8.847.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.847.v1.R.ND1-1
Possible name(s)
USP3; USP44; USP49
Gene model
Location
KhC8 [1,302,648 / 1,312,242]
Amino acid sequence
Length: 1,021
>KH.C8.847.v1.R.ND1-1
TSVHTRCTCFCFLQQSSAPKRLKILKMDKAKKSPDSKINCKTSEDTQILSKVGNDSSPSE
VKNITKCTRFRLSREYELRICNCKHILRMTVGERHSVVNPQRWLCNVCFTTESVWACLSC
PNVACGRYIHEHALNHYLETQHPLAIDVNELYVYCYACEEYVLNDNKSGDIKVLRETLQA
IRYQNFTGTTRSGHTLRTATISSDEDIQMRRRLQQQQLDRDDRNFTAIWHSRFVRQRKAF
KYWLHYVRHKSEYKDEEPVSPNISPDESPVRMESIRLREFAVLDLKTENDETVSSSPGSK
DLLPCFNTCEISSANKVNSKDLSLEMDKVTAMQEELTMEDTCKSTQSIIEIEIDTSDTVP
NDHEQLDLSHERSDNKFSADISVKGHKSEIKSEKESNFPEGDKTESKKVSRKDSVVEATQ
NTDTTQTRPKRANAASRYHEIMHRLSSFVHIEPVKKRLKLTIPTPSAGRKTSVDLEDRRR
SARLIQRTCEKAKAAEKARKKKGSKKKGKTKKSYGKSTQKAQKGQKATRVTGSSKTSHRR
IRTQSGLRSLYDSIPNKAVTSLIPGVTGLRNLGNTCYLNSIIQVLGHLQKFRLCLLALRD
LDGMDEHHDSLTSPVATHSRMGRRSTMEMYENQTNVSRRMLRLQSGLNGGHDGSASSEKD
SVLPSTQLPPSLSLCHELNDLYHIMWSGKWKLVSPCHFLSSVWQLIPSFRGYSQQDAQEF
LCELLDKIVSELEWKRRRPQMMVSNGLATRISKVVHAVFEGKLHSMVKCLECGNISSTIE
PFWDLSLEFPQRYHVNAYNWKNSNQGCTLSEMLEKFTEAEQLDGGCVYNCAKCNVTEQQV
TDRCNRRRRLSSRKITQKLTEAEKQIKISKLPQILRFHLKRFRWSGRNHREKITVPVNFP
SEFDIRQHCWSDHQSNVSAPSSSDGNFVYDLSAVVIHHGRGFGSGHYTAYCWNDIGKFWV
HCNDSNLELCSIDDVMAAQAYILFYSQRGLDPHPHFSAPCTPDMSPPISPSDSEVFDNDI
G
Nucleotide sequence
Length: 3,846
>KH2012:KH.C8.847.v1.R.ND1-1
TTCATGTATATGTGCAGATGGTAACATGTTAACTTAGCTAGTTTTGAAGCTTGAACAAGC
GTACATACACGCTGCACGTGTTTCTGTTTTCTTCAGCAATCGTCAGCGCCGAAAAGGTTG
AAAATCTTGAAGATGGATAAAGCCAAGAAAAGTCCAGATTCGAAAATAAACTGTAAAACT
TCAGAAGATACTCAAATACTGTCCAAGGTTGGGAATGATTCTTCCCCTTCTGAAGTTAAG
AATATTACAAAATGTACAAGGTTTCGCCTCTCCAGGGAATACGAGCTTCGCATATGCAAC
TGTAAGCATATTCTTCGTATGACAGTTGGAGAGCGCCACTCAGTGGTAAATCCGCAGCGT
TGGTTGTGTAATGTTTGTTTCACTACAGAGTCAGTGTGGGCGTGTCTAAGTTGTCCCAAT
GTTGCTTGTGGAAGATACATACATGAGCATGCGTTGAATCATTACCTCGAAACACAACAT
CCCCTGGCGATTGACGTTAATGAACTGTACGTTTATTGCTATGCTTGTGAGGAGTATGTG
CTGAATGATAACAAGTCAGGTGATATTAAAGTACTGCGGGAAACCTTACAGGCAATTCGA
TACCAGAACTTTACTGGCACTACAAGAAGTGGGCACACACTACGAACTGCTACCATTAGT
TCTGATGAAGATATACAGATGAGAAGAAGATTGCAACAACAACAACTAGATAGGGATGAT
CGTAACTTCACAGCCATATGGCATTCCAGGTTTGTACGTCAAAGAAAAGCGTTTAAATAC
TGGCTGCATTACGTGAGACACAAAAGTGAATACAAAGATGAGGAGCCCGTGTCTCCCAAC
ATCTCCCCAGATGAATCTCCAGTGAGGATGGAATCAATTCGGCTGAGGGAGTTTGCAGTC
CTGGACCTTAAAACTGAAAATGATGAGACGGTATCCTCTTCTCCCGGATCAAAAGATCTG
CTTCCATGTTTTAATACATGTGAAATATCATCAGCAAACAAAGTGAATTCTAAAGATTTG
TCTTTGGAGATGGACAAAGTAACTGCCATGCAAGAAGAACTTACCATGGAAGATACATGC
AAATCAACTCAGTCTATTATAGAAATTGAGATTGATACTTCAGACACTGTTCCAAACGAC
CATGAACAGTTGGATTTAAGTCATGAAAGGTCTGACAATAAGTTTTCTGCGGATATATCC
GTCAAAGGACACAAATCGGAAATAAAAAGTGAAAAAGAATCTAATTTCCCAGAAGGGGAT
AAGACTGAATCTAAAAAAGTTAGCAGAAAAGATAGCGTAGTAGAAGCTACTCAAAATACA
GACACCACGCAAACTCGTCCTAAGCGCGCAAACGCTGCCAGTCGTTATCATGAGATAATG
CACAGACTTTCATCCTTCGTTCATATTGAACCTGTAAAAAAACGATTGAAATTGACAATA
CCGACTCCAAGCGCTGGTCGCAAAACTTCTGTGGATTTAGAGGACAGAAGAAGAAGTGCA
AGACTTATTCAGAGAACTTGTGAAAAGGCAAAAGCTGCGGAAAAAGCAAGAAAGAAGAAG
GGAAGTAAAAAGAAGGGCAAAACGAAAAAATCCTATGGAAAATCAACCCAAAAAGCACAA
AAAGGTCAAAAAGCAACTCGAGTGACGGGTTCTTCTAAAACTTCCCACAGAAGAATTCGA
ACTCAGAGTGGTCTCAGATCACTATATGATAGCATCCCTAACAAAGCAGTCACTTCTTTA
ATACCAGGAGTCACTGGGCTGAGAAACTTAGGCAACACATGCTATCTAAATTCAATTATA
CAGGTCTTGGGACATCTTCAGAAATTCCGTTTATGCTTGTTGGCATTGCGGGACTTAGAC
GGAATGGACGAACACCATGATAGTTTAACTTCACCTGTTGCTACACATTCTCGTATGGGC
AGACGATCTACAATGGAAATGTATGAAAACCAAACTAATGTGTCAAGGAGAATGCTGCGG
CTTCAATCAGGTTTAAATGGTGGTCATGATGGCAGTGCTTCCAGTGAAAAAGATTCAGTG
TTGCCATCAACACAACTTCCCCCTTCCCTTTCTCTTTGCCATGAGTTAAATGACCTTTAC
CACATAATGTGGTCGGGCAAGTGGAAGCTGGTGTCTCCATGTCACTTCCTAAGTTCAGTG
TGGCAACTCATTCCTTCGTTTCGGGGTTATTCTCAGCAAGATGCTCAGGAATTCTTGTGC
GAGTTGCTCGATAAAATCGTCTCCGAATTGGAATGGAAGCGCAGACGACCTCAAATGATG
GTTTCCAATGGTTTGGCAACCAGGATATCTAAGGTGGTTCATGCAGTGTTTGAAGGCAAA
CTTCACAGTATGGTAAAGTGTTTGGAGTGTGGTAATATATCAAGCACTATTGAACCCTTT
TGGGATTTGTCGCTAGAATTTCCCCAGCGGTATCACGTCAATGCATACAACTGGAAGAAC
AGCAACCAAGGATGTACTTTATCGGAGATGTTGGAGAAATTCACTGAAGCAGAACAGCTC
GACGGTGGATGTGTGTACAACTGCGCTAAATGCAATGTTACGGAACAACAAGTTACAGAT
CGTTGCAACCGTCGTAGGCGACTTTCCAGTCGTAAAATAACCCAGAAACTCACTGAAGCG
GAAAAACAAATCAAAATCTCGAAACTGCCACAAATACTTCGTTTTCATTTGAAGCGTTTT
CGATGGAGTGGTCGCAACCACCGTGAAAAAATAACGGTGCCAGTCAATTTTCCTTCGGAA
TTCGATATCAGGCAACACTGCTGGTCTGATCATCAGTCCAATGTTTCTGCTCCAAGCAGC
AGTGATGGGAACTTTGTATACGATCTTAGTGCTGTAGTTATACACCATGGAAGGGGCTTT
GGATCAGGTCATTATACAGCATACTGTTGGAATGATATTGGAAAGTTCTGGGTCCACTGT
AATGATTCTAACCTAGAGTTATGCTCAATTGATGATGTAATGGCAGCACAAGCGTACATA
CTTTTCTACAGCCAACGAGGGTTAGACCCCCACCCCCACTTTAGTGCCCCATGTACCCCT
GATATGAGTCCCCCTATTTCACCCAGTGACTCAGAAGTGTTCGATAATGACATTGGTTGA
CAGTTTAAGCCAAAACAATAAAAGTGTCACCAAAATGCGGCAACCCTGGTGTTAGAGATC
ACGCAACAAGAGTAGGGTGTGTGCAAAACTAACTAACAATGAAAACTGGAAATTTTAAAG
TTAAATGTATTCCATAATTGCAAATACTTAACACTAGTGCAGTGCATCATTCAAAAAGAT
GTTTTTAAATATTTTCCGGAATAACAATTTCCTACAATTATTAGCATACCAATGAAGTAA
TATTTGGGAACTATAGGCTCCAAAACTTTGGTTGGAACTATTCTTGTAGTTTCTAATCAT
CTTGAATCACTATGCTTGTTACTCCAACTAAGGTTCAACCTATACATGTTTGCCAACCTT
CATTTTTGCTGTGTAAGAGTAAGCTTGCTGCTTACTGCCAAGCATACTAGTAGAAACCAT
AACTTTGCCTTCGTTTAAATGGGATTTCCACGCTTCATATAAAAATAGGACCATGTTGGT
TGCATTGTCCGCTTAATAAATTTGCTGTTTTAAACTCTAAACCAATGCTTTGACCTGTTC
ATTTTGTTCCTTTTTTACCTGATTCTTTTTCGCTTTCGGCATTTTTTTTACCATTTTTAA
CTTTCTTTTTTGTGCTATGAAATGAATGTTGGCTTGCATGTCTGTGCCCATTACTGAACT
ACAGCGTAAAAAATTCCCATTGTGCTTTTCTTACTGATCATCAATAAAGCAAAAATGCCA
TGCAAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[78-184] 1.8E-23 |
| ProSiteProfiles |
Znf_UBP (IPR001607) - T[103-164] 19.754 |
| SMART |
Znf_UBP (IPR001607) - T[104-153] 7.0E-16 |
| Pfam |
Znf_UBP (IPR001607) - T[105-166] 9.8E-19 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[567-988] 58.672 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[567-985] 2.5E-54 |
| ProSitePatterns |
USP_CS (IPR018200) - T[568-583] . - T[929-947] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP44_HUMAN | 50 % | 391 | 8.24E-123 |
| UBP49_HUMAN | 49.213 % | 392 | 1.43E-123 |
| UBP3_HUMAN | 30.947 % | 175 | 1.21E-46 |
