- Transcript 'KH2012:KH.C8.847.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.847.v1.A.SL2-1
Possible name(s)
USP3; USP44; USP49
Gene model
Location
KhC8 [1,302,648 / 1,312,243]
Amino acid sequence
Length: 1,021
>KH.C8.847.v1.A.SL2-1
TSVHTRCTCFCFLQQSSAPKRLKILKMDKAKKSPDSKINCKTSEDTQILSKVGNDSSPSE
VKNITKCTRFRLSREYELRICNCKHILRMTVGERHSVVNPQRWLCNVCFTTESVWACLSC
PNVACGRYIHEHALNHYLETQHPLAIDVNELYVYCYACEEYVLNDNKSGDIKVLRETLQA
IRYQNFTGTTRSGHTLRTATISSDEDIQMRRRLQQQQLDRDDRNFTAIWHSRFVRQRKAF
KYWLHYVRHKSEYKDEEPVSPNISPDESPVRMESIRLREFAVLDLKTENDETVSSSPGSK
DLLPCFNTCEISSANKVNSKDLSLEMDKVTAMQEELTMEDTCKSTQSIIEIEIDTSDTVP
NDHEQLDLSHERSDNKFSADISVKGHKSEIKSEKESNFPEGDKTESKKVSRKDSVVEATQ
NTDTTQTRPKRANAASRYHEIMHRLSSFVHIEPVKKRLKLTIPTPSAGRKTSVDLEDRRR
SARLIQRTCEKAKAAEKARKKKGSKKKGKTKKSYGKSTQKAQKGQKATRVTGSSKTSHRR
IRTQSGLRSLYDSIPNKAVTSLIPGVTGLRNLGNTCYLNSIIQVLGHLQKFRLCLLALRD
LDGMDEHHDSLTSPVATHSRMGRRSTMEMYENQTNVSRRMLRLQSGLNGGHDGSASSEKD
SVLPSTQLPPSLSLCHELNDLYHIMWSGKWKLVSPCHFLSSVWQLIPSFRGYSQQDAQEF
LCELLDKIVSELEWKRRRPQMMVSNGLATRISKVVHAVFEGKLHSMVKCLECGNISSTIE
PFWDLSLEFPQRYHVNAYNWKNSNQGCTLSEMLEKFTEAEQLDGGCVYNCAKCNVTEQQV
TDRCNRRRRLSSRKITQKLTEAEKQIKISKLPQILRFHLKRFRWSGRNHREKITVPVNFP
SEFDIRQHCWSDHQSNVSAPSSSDGNFVYDLSAVVIHHGRGFGSGHYTAYCWNDIGKFWV
HCNDSNLELCSIDDVMAAQAYILFYSQRGLDPHPHFSAPCTPDMSPPISPSDSEVFDNDI
G
Nucleotide sequence
Length: 3,847
>KH2012:KH.C8.847.v1.A.SL2-1
TTTCATGTATATGTGCAGATGGTAACATGTTAACTTAGCTAGTTTTGAAGCTTGAACAAG
CGTACATACACGCTGCACGTGTTTCTGTTTTCTTCAGCAATCGTCAGCGCCGAAAAGGTT
GAAAATCTTGAAGATGGATAAAGCCAAGAAAAGTCCAGATTCGAAAATAAACTGTAAAAC
TTCAGAAGATACTCAAATACTGTCCAAGGTTGGGAATGATTCTTCCCCTTCTGAAGTTAA
GAATATTACAAAATGTACAAGGTTTCGCCTCTCCAGGGAATACGAGCTTCGCATATGCAA
CTGTAAGCATATTCTTCGTATGACAGTTGGAGAGCGCCACTCAGTGGTAAATCCGCAGCG
TTGGTTGTGTAATGTTTGTTTCACTACAGAGTCAGTGTGGGCGTGTCTAAGTTGTCCCAA
TGTTGCTTGTGGAAGATACATACATGAGCATGCGTTGAATCATTACCTCGAAACACAACA
TCCCCTGGCGATTGACGTTAATGAACTGTACGTTTATTGCTATGCTTGTGAGGAGTATGT
GCTGAATGATAACAAGTCAGGTGATATTAAAGTACTGCGGGAAACCTTACAGGCAATTCG
ATACCAGAACTTTACTGGCACTACAAGAAGTGGGCACACACTACGAACTGCTACCATTAG
TTCTGATGAAGATATACAGATGAGAAGAAGATTGCAACAACAACAACTAGATAGGGATGA
TCGTAACTTCACAGCCATATGGCATTCCAGGTTTGTACGTCAAAGAAAAGCGTTTAAATA
CTGGCTGCATTACGTGAGACACAAAAGTGAATACAAAGATGAGGAGCCCGTGTCTCCCAA
CATCTCCCCAGATGAATCTCCAGTGAGGATGGAATCAATTCGGCTGAGGGAGTTTGCAGT
CCTGGACCTTAAAACTGAAAATGATGAGACGGTATCCTCTTCTCCCGGATCAAAAGATCT
GCTTCCATGTTTTAATACATGTGAAATATCATCAGCAAACAAAGTGAATTCTAAAGATTT
GTCTTTGGAGATGGACAAAGTAACTGCCATGCAAGAAGAACTTACCATGGAAGATACATG
CAAATCAACTCAGTCTATTATAGAAATTGAGATTGATACTTCAGACACTGTTCCAAACGA
CCATGAACAGTTGGATTTAAGTCATGAAAGGTCTGACAATAAGTTTTCTGCGGATATATC
CGTCAAAGGACACAAATCGGAAATAAAAAGTGAAAAAGAATCTAATTTCCCAGAAGGGGA
TAAGACTGAATCTAAAAAAGTTAGCAGAAAAGATAGCGTAGTAGAAGCTACTCAAAATAC
AGACACCACGCAAACTCGTCCTAAGCGCGCAAACGCTGCCAGTCGTTATCATGAGATAAT
GCACAGACTTTCATCCTTCGTTCATATTGAACCTGTAAAAAAACGATTGAAATTGACAAT
ACCGACTCCAAGCGCTGGTCGCAAAACTTCTGTGGATTTAGAGGACAGAAGAAGAAGTGC
AAGACTTATTCAGAGAACTTGTGAAAAGGCAAAAGCTGCGGAAAAAGCAAGAAAGAAGAA
GGGAAGTAAAAAGAAGGGCAAAACGAAAAAATCCTATGGAAAATCAACCCAAAAAGCACA
AAAAGGTCAAAAAGCAACTCGAGTGACGGGTTCTTCTAAAACTTCCCACAGAAGAATTCG
AACTCAGAGTGGTCTCAGATCACTATATGATAGCATCCCTAACAAAGCAGTCACTTCTTT
AATACCAGGAGTCACTGGGCTGAGAAACTTAGGCAACACATGCTATCTAAATTCAATTAT
ACAGGTCTTGGGACATCTTCAGAAATTCCGTTTATGCTTGTTGGCATTGCGGGACTTAGA
CGGAATGGACGAACACCATGATAGTTTAACTTCACCTGTTGCTACACATTCTCGTATGGG
CAGACGATCTACAATGGAAATGTATGAAAACCAAACTAATGTGTCAAGGAGAATGCTGCG
GCTTCAATCAGGTTTAAATGGTGGTCATGATGGCAGTGCTTCCAGTGAAAAAGATTCAGT
GTTGCCATCAACACAACTTCCCCCTTCCCTTTCTCTTTGCCATGAGTTAAATGACCTTTA
CCACATAATGTGGTCGGGCAAGTGGAAGCTGGTGTCTCCATGTCACTTCCTAAGTTCAGT
GTGGCAACTCATTCCTTCGTTTCGGGGTTATTCTCAGCAAGATGCTCAGGAATTCTTGTG
CGAGTTGCTCGATAAAATCGTCTCCGAATTGGAATGGAAGCGCAGACGACCTCAAATGAT
GGTTTCCAATGGTTTGGCAACCAGGATATCTAAGGTGGTTCATGCAGTGTTTGAAGGCAA
ACTTCACAGTATGGTAAAGTGTTTGGAGTGTGGTAATATATCAAGCACTATTGAACCCTT
TTGGGATTTGTCGCTAGAATTTCCCCAGCGGTATCACGTCAATGCATACAACTGGAAGAA
CAGCAACCAAGGATGTACTTTATCGGAGATGTTGGAGAAATTCACTGAAGCAGAACAGCT
CGACGGTGGATGTGTGTACAACTGCGCTAAATGCAATGTTACGGAACAACAAGTTACAGA
TCGTTGCAACCGTCGTAGGCGACTTTCCAGTCGTAAAATAACCCAGAAACTCACTGAAGC
GGAAAAACAAATCAAAATCTCGAAACTGCCACAAATACTTCGTTTTCATTTGAAGCGTTT
TCGATGGAGTGGTCGCAACCACCGTGAAAAAATAACGGTGCCAGTCAATTTTCCTTCGGA
ATTCGATATCAGGCAACACTGCTGGTCTGATCATCAGTCCAATGTTTCTGCTCCAAGCAG
CAGTGATGGGAACTTTGTATACGATCTTAGTGCTGTAGTTATACACCATGGAAGGGGCTT
TGGATCAGGTCATTATACAGCATACTGTTGGAATGATATTGGAAAGTTCTGGGTCCACTG
TAATGATTCTAACCTAGAGTTATGCTCAATTGATGATGTAATGGCAGCACAAGCGTACAT
ACTTTTCTACAGCCAACGAGGGTTAGACCCCCACCCCCACTTTAGTGCCCCATGTACCCC
TGATATGAGTCCCCCTATTTCACCCAGTGACTCAGAAGTGTTCGATAATGACATTGGTTG
ACAGTTTAAGCCAAAACAATAAAAGTGTCACCAAAATGCGGCAACCCTGGTGTTAGAGAT
CACGCAACAAGAGTAGGGTGTGTGCAAAACTAACTAACAATGAAAACTGGAAATTTTAAA
GTTAAATGTATTCCATAATTGCAAATACTTAACACTAGTGCAGTGCATCATTCAAAAAGA
TGTTTTTAAATATTTTCCGGAATAACAATTTCCTACAATTATTAGCATACCAATGAAGTA
ATATTTGGGAACTATAGGCTCCAAAACTTTGGTTGGAACTATTCTTGTAGTTTCTAATCA
TCTTGAATCACTATGCTTGTTACTCCAACTAAGGTTCAACCTATACATGTTTGCCAACCT
TCATTTTTGCTGTGTAAGAGTAAGCTTGCTGCTTACTGCCAAGCATACTAGTAGAAACCA
TAACTTTGCCTTCGTTTAAATGGGATTTCCACGCTTCATATAAAAATAGGACCATGTTGG
TTGCATTGTCCGCTTAATAAATTTGCTGTTTTAAACTCTAAACCAATGCTTTGACCTGTT
CATTTTGTTCCTTTTTTACCTGATTCTTTTTCGCTTTCGGCATTTTTTTTACCATTTTTA
ACTTTCTTTTTTGTGCTATGAAATGAATGTTGGCTTGCATGTCTGTGCCCATTACTGAAC
TACAGCGTAAAAAATTCCCATTGTGCTTTTCTTACTGATCATCAATAAAGCAAAAATGCC
ATGCAAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[78-184] 1.8E-23 |
| ProSiteProfiles |
Znf_UBP (IPR001607) - T[103-164] 19.754 |
| SMART |
Znf_UBP (IPR001607) - T[104-153] 7.0E-16 |
| Pfam |
Znf_UBP (IPR001607) - T[105-166] 9.8E-19 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[567-988] 58.672 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[567-985] 2.5E-54 |
| ProSitePatterns |
USP_CS (IPR018200) - T[568-583] . - T[929-947] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP44_HUMAN | 50 % | 391 | 8.24E-123 |
| UBP49_HUMAN | 49.213 % | 392 | 1.43E-123 |
| UBP3_HUMAN | 30.947 % | 175 | 1.21E-46 |
