Aniseed - Transcript Card

Transcript 'KH2012:KH.C8.777.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.777.v1.B.ND1-1

Possible name(s)

ANGPT4; ITLN1; ITLN2

Gene model

KH2012:KH.C8.777

Location

KhC8 [6,056,557 / 6,061,030]

Sequences

Amino acid sequence

Length: 518

>KH.C8.777.v1.B.ND1-1
NQNHNPVANEGIYEEEICYSPKQSYEEVVIPNKVMKADAGVENNDKKLSQKFWKIFACIG
FVWLIALTTVVIHYIANTNASKSGESASSTKTATSCLELKNSGFSNDGYYSIQPEGTDTP
IKVYCDMTTSGGGWTLVASVHENDINKECTVDDMWFSKNPAPDTLFSRYWENTNIFENVE
DATSADYKNIGYSAMKASNLMLRHVPNKTPVDQSKSQASLQYHTSNNFLDKYVPYPPNVN
KLVDAIAALSPNLISGIPDFYNYKYGTETDRLQNGGNGTFTSYGMKIHFNLHCSFSVVYE
TEGKCSLSKSIAFSRKSHPFIVVSALENPNLYSSGGYAIQSYRSSSDPVMLYNDRLIEGN
FELQYRARCVYGRNVPSVCDVCFVVNNTKDWASSTTFTFYSQGTWQSTYLMQLNNYPKRI
MFGYTMLSRTAGRLVTKVQIESTLRKMLQPFKNYTWSAPCATNHLVVPVTYTIGESTLSN
FVPTPMHSATTTGFLQIRAESYAGTYYAMCPAVKYAVC

Nucleotide sequence

Length: 1,947

>KH2012:KH.C8.777.v1.B.ND1-1
TGCAACAGAAAGTATTAAAACCAGAACCATAACCCAGTGGCTAATGAAGGAATTTATGAA
GAAGAAATTTGCTACAGCCCAAAGCAAAGTTATGAAGAAGTGGTAATACCAAACAAAGTA
ATGAAAGCAGATGCTGGGGTGGAAAACAACGATAAAAAATTGTCGCAGAAGTTTTGGAAA
ATCTTTGCTTGTATTGGTTTTGTGTGGCTTATTGCTTTGACAACTGTTGTGATTCACTAC
ATTGCTAATACCAATGCAAGCAAGTCAGGAGAGTCTGCCTCATCCACAAAAACAGCTACT
TCATGTTTGGAGTTGAAAAACTCAGGTTTCTCCAATGATGGCTACTACTCGATACAGCCT
GAAGGAACTGACACTCCAATCAAGGTTTATTGTGACATGACAACTTCTGGGGGAGGTTGG
ACTTTAGTTGCATCTGTTCATGAGAATGATATCAATAAAGAATGCACAGTTGATGATATG
TGGTTCAGTAAAAACCCGGCACCGGATACACTATTTTCAAGATACTGGGAAAACACGAAC
ATATTTGAAAATGTAGAAGATGCGACCTCAGCAGATTATAAAAACATTGGTTATTCTGCA
ATGAAGGCATCTAATCTGATGTTACGTCATGTACCAAACAAAACACCTGTGGACCAATCA
AAATCCCAGGCAAGCTTGCAATACCACACAAGCAACAACTTCCTTGACAAGTATGTTCCG
TACCCACCCAATGTTAACAAGTTGGTTGATGCAATAGCAGCTCTCTCTCCAAACTTGATT
TCAGGAATCCCAGACTTTTACAATTATAAATATGGCACTGAAACTGATCGTTTACAAAAT
GGTGGGAATGGTACTTTTACCAGTTATGGAATGAAGATTCATTTCAACCTTCATTGTTCA
TTTTCGGTTGTTTATGAAACAGAAGGAAAATGTTCATTAAGTAAAAGCATAGCATTCAGC
AGAAAATCTCATCCGTTTATTGTTGTATCAGCTCTTGAAAACCCAAATTTATATTCCTCA
GGAGGGTATGCGATACAAAGCTACAGATCATCCTCTGACCCAGTCATGTTATACAATGAT
AGGCTAATAGAAGGCAACTTTGAGCTTCAATACAGAGCTAGATGCGTTTATGGAAGAAAT
GTTCCAAGTGTTTGTGATGTTTGCTTCGTAGTTAATAACACAAAGGATTGGGCATCATCT
ACAACATTTACTTTCTATTCACAAGGAACTTGGCAATCAACATACCTTATGCAGTTAAAT
AACTACCCAAAAAGAATAATGTTTGGTTACACCATGCTTTCAAGAACTGCTGGACGACTT
GTGACAAAAGTTCAGATTGAATCAACTCTGAGGAAAATGTTGCAGCCTTTTAAAAACTAC
ACCTGGTCAGCCCCATGTGCAACCAACCATTTAGTAGTACCAGTGACATACACAATTGGT
GAATCTACTTTGAGCAACTTTGTTCCCACTCCTATGCACTCAGCAACAACAACTGGATTC
TTACAGATCCGTGCTGAATCATATGCTGGAACTTACTATGCTATGTGCCCTGCTGTTAAG
TATGCAGTCTGTTGATGAAATAGGCTGAAAATAGGGTTTCTTTGTGTTTTAGACTAAATA
GTTGTGATGGACGATTTGTTTGCATTGGCGGTGTGAAAGATGGAAATAGTATAGAAACTG
ATAACTGCAATGACTTCACTGATTGGAATGGGGTATTTAGCAACCCATGGAGACACACCA
AGGAGGGTTATGCCCATTCAACTAAAGACATTAGATCCACCATCATGATTTTCTATCGTT
AAAGCGATAATCAAACTCACGTGTAGTCTTCTTATACATTAGATAAACATATGATGAAAT
ATCTTCTAGTTATTATTGTATCATGTTACCCACTTTGTCCACTTTATTCCTTTAACATAA
AATAAACAATGTGTTTACCTTCCTGTT

InterProScan

Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[67-154] 1.1E-13
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[87-144] 14.304
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[89-229] 2.24E-22
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[95-141] 3.8E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ITLN2_HUMAN	44.286 %	113	8.85E-28
ITLN1_HUMAN	41.011 %	110	5.48E-27