- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Moocci.CG.ELv1_2.S63...' >
- Transcript 'KH2012:KH.C5.108.v1....' >
- Transcript 'KH2012:KH.C8.707.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.707.v1.R.ND1-1
Possible name(s)
DAW1; EED; WSB1
Gene model
Location
KhC8 [5,475,501 / 5,481,987]
Amino acid sequence
Length: 434
>KH.C8.707.v1.R.ND1-1
IFCREGAVSNMEVESPNINPKVQDENEDENNLPKQVISTKDENTAVNETGPAQKTKRGKG
KSKISKKLPAKGLFKCTNSLKEDHGQPLFGVSFCHQTSKDEYPMFASVGSNRIAVYECRD
DGYIKLLQAYSDPESEENFYSCTWTVDSTSGHPLLAVAGSRGIIRVLNVSTKQCIKHYIG
HGNAVNELKFHPQMPQILLSASKDHSLRVWNIKTDVLVCMFSGVEGHRDEVLSCDFNIFG
TKIISCGMDHSLKIWNFDGEDLKSALKASEVYKPNTNDKPFPTLHFHNPYFSTRDIHKNY
VDCARWFGDFILSKSCENCIVCWKPGSINCSLNQLKPKESNVTVLSRLEFQHCDIWYMRF
AIDYWHKYLAVGNQYGKTFIWELDHLDPAKSKCFTLSNIRCTTTIRQTAFSKDGSILICV
CDDSTIWRWDLQGK
Nucleotide sequence
Length: 2,368
>KH2012:KH.C8.707.v1.R.ND1-1
ATCTTTTGTCGCGAGGGTGCTGTCTCAAACATGGAAGTAGAATCCCCTAACATAAACCCA
AAGGTGCAAGATGAAAACGAAGATGAAAACAACTTACCGAAGCAGGTGATTTCGACCAAG
GACGAAAATACTGCAGTAAACGAAACAGGACCAGCGCAAAAGACGAAACGCGGTAAAGGG
AAAAGCAAGATTTCGAAGAAGCTACCTGCCAAAGGATTGTTTAAATGCACTAACTCGCTA
AAGGAAGACCATGGCCAACCATTGTTTGGTGTTTCATTTTGCCACCAGACGTCCAAGGAC
GAATACCCAATGTTTGCATCTGTGGGAAGCAATAGAATCGCTGTTTATGAATGCAGAGAT
GATGGTTATATCAAACTTCTGCAAGCATATTCTGATCCTGAGAGTGAAGAAAACTTTTAC
TCGTGCACATGGACTGTTGATTCTACCAGTGGTCATCCCCTGCTTGCTGTGGCTGGATCA
CGAGGAATTATCCGTGTTTTAAACGTTTCAACGAAACAGTGTATTAAACATTATATCGGG
CACGGAAATGCAGTAAATGAGTTGAAATTCCATCCACAAATGCCTCAAATTCTCCTCAGT
GCATCTAAGGATCATTCCCTGAGGGTTTGGAATATTAAAACTGATGTTCTTGTTTGTATG
TTTAGTGGAGTGGAGGGTCACAGAGACGAAGTGTTAAGTTGTGATTTTAACATTTTTGGG
ACCAAAATAATATCTTGTGGGATGGACCATTCATTAAAGATATGGAATTTTGATGGTGAA
GATTTAAAGTCGGCACTTAAAGCATCAGAAGTCTACAAACCAAACACTAATGACAAGCCT
TTCCCCACCCTTCACTTCCATAATCCATATTTCTCTACAAGAGACATCCACAAAAACTAT
GTAGATTGTGCAAGGTGGTTTGGGGACTTTATTCTATCCAAGTCGTGTGAAAACTGTATA
GTATGTTGGAAACCGGGTTCAATAAACTGCAGTCTTAACCAGCTGAAACCTAAAGAATCA
AATGTGACAGTTCTAAGCAGACTGGAGTTCCAACATTGTGATATTTGGTACATGAGGTTT
GCCATTGATTACTGGCACAAGTACCTTGCTGTTGGGAACCAGTATGGAAAAACTTTTATC
TGGGAGCTTGACCATTTAGACCCCGCTAAGTCAAAGTGTTTCACACTTAGTAATATCCGA
TGTACAACAACGATCAGACAAACCGCTTTCTCAAAAGATGGGAGCATCCTTATTTGCGTG
TGCGATGATTCGACGATTTGGCGATGGGACCTGCAAGGCAAATAACGATAACCCAGGTCG
CTGCCTTTCTTTTCTATTATACAACAACAACAACAACGGCCCGCAACCGCTAAAACGCTG
AGAAATCGTAAAAGTGATTTTACCTCTCACAAAAAAATCACGGCGAATGCATTAGTTGGT
GTACGGTATGCATTATCTGCCGAGTGCTTATACGAGATAAGACATTTTTGATAAAACTTT
TACGTAGAAAGCGCGCGGTCTGTGGTTCTTCATCTTTTTGCCAAAGTTTTAAGACTTCCC
AAACTAAAGATCTGCACTTTTATCTGCGGAACCTTTTTTCCGCGGTGCAAATAGCGTTCT
TTTTCTGTGACGTCATGAACACGTCACATTTCATGCCTTCGAAAAATAAATCAGGTTTTC
GCGTGACGATCTTTTAAATCAATCCAGAATGCATGGCCCATCGTAGTAAAAGGAAACTTT
AATGCGTATAACATTTAAAATGATCAATTGTATTACTAAAAAACGATAAAGGGACCAACT
ATAAGTTACACAGTATAGCTAGCGCACAGTAAATGGATTTGCTGCTAAAATATATATAGT
ATTGTGGGAAAGACGGGACGCCTTTAGCACGTAATATCCTGATCGTGCTTTAAACAATTA
ACAACGGTCCATGGGAGTTGTGAGGATACGGTTTTATAATTCTTTGTTTACTACTAAATG
AGACGAGAAAATAGCACGAAAAGGTGTCCCATCTTCCTCCACCCTACTATACGACTACAG
CAATGAACATCCAATAGTTGTTGCATGGCATTTATATCAAGTTAAGGTGACAGGTTTCAT
TTTTTGGTTTTCTTTTTGGCCAAAATTAAAGGTATCTCCAACAAAAAAAATGCTTGCGTG
ATCTTTCTCTCCCGCTTTTGGTCAGTACATCTTTAAATGTCTGACTTTCATCTTCGTTTT
TTTTTGTTCAAAGCGTAATGACTTTTTATTCGGTCAGTACATGGCCCACTTTATGTTATA
GCACGCCGTGGGTCAGGGCATGATTAATCGTCTAAGATCTTCGTCCGTTTTGCTTTTTTC
AATTAAACTTTTACACCCCCTCTACAAA
| PANTHER |
Polycomb_EED (IPR037352) - T[27-431] 2.0E-149 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[70-431] 1.1E-121 |
| SMART |
WD40_repeat (IPR001680) - T[73-117] 150.0 - T[171-211] 2.8E-8 - T[214-256] 4.1E-6 - T[287-324] 81.0 - T[389-430] 1.1 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[79-432] 6.02E-43 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[154-265] 19.696 |
| Pfam |
WD40_repeat (IPR001680) - T[173-211] 7.2E-7 - T[224-256] 2.2E-4 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[178-214] 13.449 - T[224-265] 11.544 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[198-212] . - T[243-257] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EED_HUMAN | 55.181 % | 499 | 6.01E-176 |