- Transcript 'KH2012:KH.C4.531.v2....' >
- Transcript 'KH2012:KH.C4.133.v1....' >
- Transcript 'KH2012:KH.C8.677.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.677.v1.A.SL2-1
Possible name(s)
PRDM10; ZNF112; ZNF543
Gene model
Location
KhC8 [917,929 / 925,279]
Amino acid sequence
Length: 1,101
>KH.C8.677.v1.A.SL2-1
INLCRRAKYSNMYQQPPSHSNNASPHRGLHNGYSNFPVPQTGSPHATNFAPQPYSLQHKS
PYSPSTQSHHDLHNRPCMPHQAGVPHPNISMSNPTPMQASTHSGFTQPQHLMPNSAYHQP
NPVSTAPPSFALKNNNNNNHSLPQTSPMFYNNPTSSGYPMQNNPYQRMSQYPNQAPVSQP
PTWDNTTHNIHHHQRTANHLQSPKSDMSNSPTSNSSNDGKSSRANRSFTCPKCAKVFKRG
DHLKRHLLSVHDREHPYQCGECSKGFASISTLLRHGQTSHSGITTKGHLCVRCNIRIVNL
QEFENHATSLHEAQDLEYMKNINQCSRTYSCSLCNKTVSSEKNLKRHVKKLHGDVMEENS
TSAISNTSTAVASPSVSTQSQPTVNTTVANALNPTAQPEPVQAHHQSEPNFQIELPKAVP
ETFPFNVVPQITTASQNIEHAVKPIKSESVLTAPAPHAVQEEKLTVESYTANQKEIENKM
PKNIVQNSVTDTTQAMHSQQYFTSCASNTLQSAAPIVYSEPNTVSEAFSMAMKALSDFSY
DDLSFSSTDYLSAGPSVFQSNSPLPNFHYPSRARMQTDQVDSRDYYQASSVQQETGAAYP
GQALSYPEVKVFSAPVCHDITVIPPLQQDSLNGDKSYENGSFQVKRGRPKKKRRRDEEEE
DDDQGLGMITKDPASENLSYNCTVCSEVYEGIDKLMQHVEAVHLSLNPHECCICNKRFAQ
AGNVKRHIRFVHLRERPFRCRECDSTFDRLCYLQRHMRAHIDSKADSPVASQLNPCNCPE
CGKRCLTTHHLRGHMQRKHFAKNKNRSEDLRSKYGYLFNDLDQVNQGEKMGSKPYDQNES
KKMLNKQNNEVHVVSNATIQQTPQQIVNFSTVPLQPNLHNSEVQGHELHEDNSQLSMLLT
ANDDESHDISSKLNIKSNPLTSEVIGQGRSIQFKLNPPKKMTAVKINTKRKNRIKIYYGK
AMIKKMKSRIQLRYKCHCCVHPGFPKIYLLKSHLAVAHHSATKCHICIGCGRSFSTSDSL
LVHIRKQHKSKKINSSVCTSRKQLQSNSKPHSVDQKGFSKIEALHMTNNMSVLGHFAYKE
PQARFENIPQLSTHSLVHAEM
Nucleotide sequence
Length: 4,547
>KH2012:KH.C8.677.v1.A.SL2-1
TTTTTGAACAGATTTGGTGTAATTGATTTTCCACTGTATTGTGTTGCCAAAGTATTTCTA
AATGAAGAATTCCAACATGTGTACCCCAACCTGCTTCTAAATGAATAAACTTATGCAGAA
GAGCCAAATATTCAAATATGTACCAACAGCCACCCTCACATTCTAATAATGCATCCCCGC
ATAGAGGGCTACACAATGGTTATTCTAACTTCCCTGTCCCTCAAACAGGGTCTCCTCATG
CCACAAACTTTGCCCCACAGCCCTATTCGTTACAGCATAAATCCCCATACAGCCCCAGCA
CCCAAAGCCACCATGATTTGCACAACAGACCATGCATGCCCCACCAAGCTGGAGTCCCAC
ACCCGAATATATCCATGTCCAACCCTACACCCATGCAAGCCTCAACTCACAGTGGTTTTA
CTCAACCACAACACCTGATGCCAAATTCTGCATATCACCAACCCAACCCAGTTTCAACTG
CACCTCCAAGTTTTGCATTAAAGAACAACAACAACAACAACCATTCCCTGCCCCAAACGT
CCCCCATGTTTTACAACAACCCCACTAGCAGTGGTTACCCCATGCAAAATAATCCCTACC
AAAGAATGTCTCAATACCCCAATCAAGCTCCAGTCTCCCAGCCCCCAACATGGGACAACA
CAACACACAACATACACCACCATCAACGCACTGCAAACCACCTCCAGTCTCCAAAATCTG
ACATGAGCAATAGTCCCACTTCCAACAGCAGCAATGACGGTAAAAGTTCTCGTGCAAACA
GATCTTTCACATGTCCAAAATGTGCCAAGGTATTCAAAAGAGGAGATCACTTGAAAAGGC
ATCTTCTTTCTGTCCATGACCGTGAACACCCATACCAATGTGGAGAGTGCTCTAAGGGTT
TCGCTTCAATAAGCACCCTTTTACGGCACGGACAAACCTCACACTCTGGCATAACAACAA
AGGGACATTTATGTGTCAGGTGTAACATACGAATAGTGAACCTGCAGGAGTTTGAAAATC
ATGCTACTAGTTTACATGAAGCACAGGATTTGGAGTATATGAAAAATATCAACCAGTGTA
GCAGGACATACTCATGTAGTTTATGCAACAAAACTGTCTCATCTGAAAAAAATTTAAAGC
GGCATGTAAAGAAATTGCATGGAGACGTTATGGAAGAGAATAGTACAAGTGCAATCAGCA
ATACTTCAACTGCTGTAGCATCACCTAGTGTCAGCACACAATCACAACCTACAGTGAATA
CAACAGTTGCAAATGCTTTAAACCCTACTGCCCAACCAGAACCAGTACAAGCTCACCACC
AAAGTGAACCTAATTTCCAAATAGAACTTCCAAAGGCTGTACCTGAAACTTTTCCATTTA
ATGTTGTCCCTCAAATAACAACTGCAAGTCAGAACATAGAGCATGCAGTGAAACCAATAA
AATCTGAAAGTGTTCTTACCGCCCCAGCACCACATGCTGTGCAAGAAGAGAAGTTAACAG
TGGAAAGTTACACTGCAAACCAAAAAGAAATAGAAAATAAAATGCCTAAAAATATCGTTC
AAAATTCTGTAACTGACACAACACAAGCAATGCATTCTCAGCAATATTTTACATCCTGTG
CCTCAAACACCTTGCAGTCAGCAGCACCCATTGTGTATTCTGAACCAAACACAGTTTCCG
AAGCTTTTTCAATGGCAATGAAAGCTCTATCTGATTTCTCATATGATGACCTCTCTTTTT
CTTCCACTGACTACTTGAGTGCGGGGCCATCAGTTTTCCAGTCCAACTCGCCACTGCCGA
ACTTTCACTACCCCAGCAGAGCCCGAATGCAAACAGACCAAGTTGATTCAAGGGATTACT
ACCAAGCCTCATCAGTGCAACAGGAAACTGGTGCAGCATATCCAGGCCAGGCTTTGTCTT
ATCCTGAAGTAAAAGTCTTCTCAGCACCAGTGTGCCATGATATTACAGTCATACCCCCCC
TGCAGCAAGATTCACTCAATGGAGACAAAAGTTACGAAAATGGCTCGTTTCAAGTGAAGA
GAGGAAGACCTAAGAAGAAACGGAGGAGAGATGAAGAAGAAGAAGATGATGATCAAGGAC
TTGGGATGATTACCAAAGATCCAGCCAGCGAGAATTTAAGTTACAACTGTACTGTATGCA
GTGAGGTGTATGAGGGAATCGACAAGTTGATGCAACATGTAGAAGCAGTTCACTTGAGTC
TCAACCCTCATGAATGTTGCATATGCAACAAGCGATTTGCGCAAGCCGGCAACGTAAAAC
GACACATAAGGTTCGTGCATCTACGAGAGCGACCGTTCCGATGCAGGGAATGTGATTCTA
CATTTGACCGGCTCTGCTACCTACAGCGACATATGCGAGCTCACATTGATTCGAAGGCAG
ACAGTCCGGTTGCTTCTCAATTAAACCCATGCAACTGCCCTGAGTGTGGCAAGCGTTGTT
TGACCACCCATCATCTGAGAGGTCACATGCAGAGGAAGCATTTTGCGAAGAACAAGAACA
GATCAGAAGACCTCCGGAGCAAATACGGATACTTGTTTAATGACCTTGATCAAGTAAATC
AAGGAGAAAAGATGGGTTCAAAACCTTATGATCAAAATGAAAGCAAGAAAATGCTAAACA
AACAGAACAATGAAGTACATGTTGTGTCAAATGCAACAATACAGCAAACGCCACAGCAGA
TCGTCAATTTTTCAACTGTTCCGCTACAGCCCAACTTACACAACAGTGAAGTACAAGGAC
ATGAACTGCATGAAGACAATTCACAACTATCAATGTTACTTACTGCTAATGATGATGAGA
GCCATGACATTTCTTCAAAATTAAATATTAAGTCTAACCCTTTAACGTCTGAGGTCATTG
GCCAAGGCAGATCAATCCAGTTTAAACTGAATCCACCAAAGAAGATGACTGCAGTTAAGA
TAAATACCAAACGAAAGAACAGAATAAAAATTTATTATGGAAAAGCCATGATTAAAAAAA
TGAAGTCCAGGATTCAGTTGAGGTATAAATGCCATTGCTGTGTGCATCCTGGGTTTCCGA
AGATTTATCTTCTCAAAAGTCATCTGGCTGTAGCTCACCACAGCGCCACCAAGTGTCACA
TCTGCATCGGATGCGGTCGTAGTTTTTCCACCTCTGACTCTCTTCTTGTGCACATCCGGA
AGCAACACAAGAGCAAGAAGATCAATTCCTCAGTCTGTACAAGCAGAAAGCAACTCCAAA
GCAATTCAAAGCCACATTCAGTCGACCAAAAGGGCTTTTCCAAGATCGAGGCATTACATA
TGACAAACAATATGTCTGTTTTGGGCCATTTTGCTTACAAGGAGCCACAAGCACGCTTTG
AAAATATTCCCCAGTTGTCAACACATTCGCTTGTGCATGCCGAAATGTGATGGATTTAAA
TCTAAATTGGCAATAATTGTGACAAAAATTACATCACAACCAAATGCTTTTACCTTATTG
CGTCTGTTTTATACTATACTACCTACCGTTTCATTTGTTCTTAATGTGTATTTCCAGATG
ACAGCACCAAATTAACAGGTGCTACTTCCCTTTTTACCTCAGTAAGCCACGTAATACACA
CTTGTCATTGCAGTGTTGTTTTCTTAGTACAACACCACCAAGCGCCGTGAATGAAGCAAT
TTCTTCATCCTATAAAAACTTCTTCACTGACAGTCAACTGCCCTATTGCAACACAGCTGT
GAAGCTGATTTGTATTTTTTCCTAGTTTGCACTAACTAATTTTACATTTGACCTTCAAAA
TGAATTATATCAGTTTTGTGGACAAAGTGTTACCACGTTATTATTTTTGAAAATCTGGTT
TTTAGTTTCATTTTGTAACCCAAACATGATTGAAACTTCCAATCATTGTATTTTTGCTAC
ATCCTTGTAAATAATGATCATGTTACACATGTTTTGGCATAACCCAACTACTATAATCAC
TGCCAACCTGTGCTTTTACACAAGTTGCATTCCATTATTCTCATATTGGTTTTGAGTTTT
ACCCATTTTTAAGCTGACCCACATTATTGGTGGCTATACTATTTTAGCAATAATGCTTTT
TATATCCATATTATACCATAGTGATTCCCTGTAACTATTCCCTGGTGCGTGTACCTTTGT
ATCACTGTTTTGTACCCACTAGCTTCTGTAACAATTTTATTTTACCCAACTCTGTAACCA
CCCTTTGTATTTTCAATCGTTGTAAAATATATCAACTCTAATTCATTAAATCCTGCTTTG
TACCTTTACACAGCGTACACTAAACCTAAACACTATTTGAGAGTTTATATTGCATACCTC
ACATCCTATTGCTCATATATGTGAACAACCAAAGGGCTGCTGATCTGAAATGAATTTTGT
AATTGGCTTTCCATCAATGTTTCTGCTGTACAATTGCACTATGTTTGCCACATTCCGTTT
TGTTATTGTTCACCAGCAGTATGAAATACCTTCGTGTTAACGTTTCATGACTTCCACCTT
TGCCTGACATGTTTATTCGCTTGTGTAGTAAATATTGTGACATTGCA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[226-276] 2.96E-11 - T[708-760] 2.15E-11 - T[984-1032] 7.81E-5 |
| SMART |
Znf_C2H2_type (IPR013087) - T[228-251] 0.0011 - T[257-280] 0.64 - T[288-311] 39.0 - T[329-352] 0.0013 - T[680-703] 0.32 - T[709-732] 0.011 - T[738-760] 0.0071 - T[776-799] 2.3 - T[974-998] 120.0 - T[1005-1028] 0.013 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[228-256] 13.152 - T[257-285] 12.009 - T[329-352] 10.408 - T[680-708] 9.91 - T[709-737] 13.256 - T[738-765] 11.988 - T[776-804] 8.559 - T[1005-1033] 11.489 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[230-251] . - T[259-280] . - T[331-352] . - T[682-703] . - T[711-732] . - T[740-760] . - T[776-799] . - T[1007-1028] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN112_HUMAN | 26.952 % | 88.6 | 1.09E-17 |