- Transcript 'KH2012:KH.C8.677.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.677.v1.A.SL1-1
Possible name(s)
PRDM10; ZNF112; ZNF543
Gene model
Location
KhC8 [917,929 / 925,268]
Amino acid sequence
Length: 1,101
>KH.C8.677.v1.A.SL1-1
INLCRRAKYSNMYQQPPSHSNNASPHRGLHNGYSNFPVPQTGSPHATNFAPQPYSLQHKS
PYSPSTQSHHDLHNRPCMPHQAGVPHPNISMSNPTPMQASTHSGFTQPQHLMPNSAYHQP
NPVSTAPPSFALKNNNNNNHSLPQTSPMFYNNPTSSGYPMQNNPYQRMSQYPNQAPVSQP
PTWDNTTHNIHHHQRTANHLQSPKSDMSNSPTSNSSNDGKSSRANRSFTCPKCAKVFKRG
DHLKRHLLSVHDREHPYQCGECSKGFASISTLLRHGQTSHSGITTKGHLCVRCNIRIVNL
QEFENHATSLHEAQDLEYMKNINQCSRTYSCSLCNKTVSSEKNLKRHVKKLHGDVMEENS
TSAISNTSTAVASPSVSTQSQPTVNTTVANALNPTAQPEPVQAHHQSEPNFQIELPKAVP
ETFPFNVVPQITTASQNIEHAVKPIKSESVLTAPAPHAVQEEKLTVESYTANQKEIENKM
PKNIVQNSVTDTTQAMHSQQYFTSCASNTLQSAAPIVYSEPNTVSEAFSMAMKALSDFSY
DDLSFSSTDYLSAGPSVFQSNSPLPNFHYPSRARMQTDQVDSRDYYQASSVQQETGAAYP
GQALSYPEVKVFSAPVCHDITVIPPLQQDSLNGDKSYENGSFQVKRGRPKKKRRRDEEEE
DDDQGLGMITKDPASENLSYNCTVCSEVYEGIDKLMQHVEAVHLSLNPHECCICNKRFAQ
AGNVKRHIRFVHLRERPFRCRECDSTFDRLCYLQRHMRAHIDSKADSPVASQLNPCNCPE
CGKRCLTTHHLRGHMQRKHFAKNKNRSEDLRSKYGYLFNDLDQVNQGEKMGSKPYDQNES
KKMLNKQNNEVHVVSNATIQQTPQQIVNFSTVPLQPNLHNSEVQGHELHEDNSQLSMLLT
ANDDESHDISSKLNIKSNPLTSEVIGQGRSIQFKLNPPKKMTAVKINTKRKNRIKIYYGK
AMIKKMKSRIQLRYKCHCCVHPGFPKIYLLKSHLAVAHHSATKCHICIGCGRSFSTSDSL
LVHIRKQHKSKKINSSVCTSRKQLQSNSKPHSVDQKGFSKIEALHMTNNMSVLGHFAYKE
PQARFENIPQLSTHSLVHAEM
Nucleotide sequence
Length: 4,536
>KH2012:KH.C8.677.v1.A.SL1-1
ATTTGGTGTAATTGATTTTCCACTGTATTGTGTTGCCAAAGTATTTCTAAATGAAGAATT
CCAACATGTGTACCCCAACCTGCTTCTAAATGAATAAACTTATGCAGAAGAGCCAAATAT
TCAAATATGTACCAACAGCCACCCTCACATTCTAATAATGCATCCCCGCATAGAGGGCTA
CACAATGGTTATTCTAACTTCCCTGTCCCTCAAACAGGGTCTCCTCATGCCACAAACTTT
GCCCCACAGCCCTATTCGTTACAGCATAAATCCCCATACAGCCCCAGCACCCAAAGCCAC
CATGATTTGCACAACAGACCATGCATGCCCCACCAAGCTGGAGTCCCACACCCGAATATA
TCCATGTCCAACCCTACACCCATGCAAGCCTCAACTCACAGTGGTTTTACTCAACCACAA
CACCTGATGCCAAATTCTGCATATCACCAACCCAACCCAGTTTCAACTGCACCTCCAAGT
TTTGCATTAAAGAACAACAACAACAACAACCATTCCCTGCCCCAAACGTCCCCCATGTTT
TACAACAACCCCACTAGCAGTGGTTACCCCATGCAAAATAATCCCTACCAAAGAATGTCT
CAATACCCCAATCAAGCTCCAGTCTCCCAGCCCCCAACATGGGACAACACAACACACAAC
ATACACCACCATCAACGCACTGCAAACCACCTCCAGTCTCCAAAATCTGACATGAGCAAT
AGTCCCACTTCCAACAGCAGCAATGACGGTAAAAGTTCTCGTGCAAACAGATCTTTCACA
TGTCCAAAATGTGCCAAGGTATTCAAAAGAGGAGATCACTTGAAAAGGCATCTTCTTTCT
GTCCATGACCGTGAACACCCATACCAATGTGGAGAGTGCTCTAAGGGTTTCGCTTCAATA
AGCACCCTTTTACGGCACGGACAAACCTCACACTCTGGCATAACAACAAAGGGACATTTA
TGTGTCAGGTGTAACATACGAATAGTGAACCTGCAGGAGTTTGAAAATCATGCTACTAGT
TTACATGAAGCACAGGATTTGGAGTATATGAAAAATATCAACCAGTGTAGCAGGACATAC
TCATGTAGTTTATGCAACAAAACTGTCTCATCTGAAAAAAATTTAAAGCGGCATGTAAAG
AAATTGCATGGAGACGTTATGGAAGAGAATAGTACAAGTGCAATCAGCAATACTTCAACT
GCTGTAGCATCACCTAGTGTCAGCACACAATCACAACCTACAGTGAATACAACAGTTGCA
AATGCTTTAAACCCTACTGCCCAACCAGAACCAGTACAAGCTCACCACCAAAGTGAACCT
AATTTCCAAATAGAACTTCCAAAGGCTGTACCTGAAACTTTTCCATTTAATGTTGTCCCT
CAAATAACAACTGCAAGTCAGAACATAGAGCATGCAGTGAAACCAATAAAATCTGAAAGT
GTTCTTACCGCCCCAGCACCACATGCTGTGCAAGAAGAGAAGTTAACAGTGGAAAGTTAC
ACTGCAAACCAAAAAGAAATAGAAAATAAAATGCCTAAAAATATCGTTCAAAATTCTGTA
ACTGACACAACACAAGCAATGCATTCTCAGCAATATTTTACATCCTGTGCCTCAAACACC
TTGCAGTCAGCAGCACCCATTGTGTATTCTGAACCAAACACAGTTTCCGAAGCTTTTTCA
ATGGCAATGAAAGCTCTATCTGATTTCTCATATGATGACCTCTCTTTTTCTTCCACTGAC
TACTTGAGTGCGGGGCCATCAGTTTTCCAGTCCAACTCGCCACTGCCGAACTTTCACTAC
CCCAGCAGAGCCCGAATGCAAACAGACCAAGTTGATTCAAGGGATTACTACCAAGCCTCA
TCAGTGCAACAGGAAACTGGTGCAGCATATCCAGGCCAGGCTTTGTCTTATCCTGAAGTA
AAAGTCTTCTCAGCACCAGTGTGCCATGATATTACAGTCATACCCCCCCTGCAGCAAGAT
TCACTCAATGGAGACAAAAGTTACGAAAATGGCTCGTTTCAAGTGAAGAGAGGAAGACCT
AAGAAGAAACGGAGGAGAGATGAAGAAGAAGAAGATGATGATCAAGGACTTGGGATGATT
ACCAAAGATCCAGCCAGCGAGAATTTAAGTTACAACTGTACTGTATGCAGTGAGGTGTAT
GAGGGAATCGACAAGTTGATGCAACATGTAGAAGCAGTTCACTTGAGTCTCAACCCTCAT
GAATGTTGCATATGCAACAAGCGATTTGCGCAAGCCGGCAACGTAAAACGACACATAAGG
TTCGTGCATCTACGAGAGCGACCGTTCCGATGCAGGGAATGTGATTCTACATTTGACCGG
CTCTGCTACCTACAGCGACATATGCGAGCTCACATTGATTCGAAGGCAGACAGTCCGGTT
GCTTCTCAATTAAACCCATGCAACTGCCCTGAGTGTGGCAAGCGTTGTTTGACCACCCAT
CATCTGAGAGGTCACATGCAGAGGAAGCATTTTGCGAAGAACAAGAACAGATCAGAAGAC
CTCCGGAGCAAATACGGATACTTGTTTAATGACCTTGATCAAGTAAATCAAGGAGAAAAG
ATGGGTTCAAAACCTTATGATCAAAATGAAAGCAAGAAAATGCTAAACAAACAGAACAAT
GAAGTACATGTTGTGTCAAATGCAACAATACAGCAAACGCCACAGCAGATCGTCAATTTT
TCAACTGTTCCGCTACAGCCCAACTTACACAACAGTGAAGTACAAGGACATGAACTGCAT
GAAGACAATTCACAACTATCAATGTTACTTACTGCTAATGATGATGAGAGCCATGACATT
TCTTCAAAATTAAATATTAAGTCTAACCCTTTAACGTCTGAGGTCATTGGCCAAGGCAGA
TCAATCCAGTTTAAACTGAATCCACCAAAGAAGATGACTGCAGTTAAGATAAATACCAAA
CGAAAGAACAGAATAAAAATTTATTATGGAAAAGCCATGATTAAAAAAATGAAGTCCAGG
ATTCAGTTGAGGTATAAATGCCATTGCTGTGTGCATCCTGGGTTTCCGAAGATTTATCTT
CTCAAAAGTCATCTGGCTGTAGCTCACCACAGCGCCACCAAGTGTCACATCTGCATCGGA
TGCGGTCGTAGTTTTTCCACCTCTGACTCTCTTCTTGTGCACATCCGGAAGCAACACAAG
AGCAAGAAGATCAATTCCTCAGTCTGTACAAGCAGAAAGCAACTCCAAAGCAATTCAAAG
CCACATTCAGTCGACCAAAAGGGCTTTTCCAAGATCGAGGCATTACATATGACAAACAAT
ATGTCTGTTTTGGGCCATTTTGCTTACAAGGAGCCACAAGCACGCTTTGAAAATATTCCC
CAGTTGTCAACACATTCGCTTGTGCATGCCGAAATGTGATGGATTTAAATCTAAATTGGC
AATAATTGTGACAAAAATTACATCACAACCAAATGCTTTTACCTTATTGCGTCTGTTTTA
TACTATACTACCTACCGTTTCATTTGTTCTTAATGTGTATTTCCAGATGACAGCACCAAA
TTAACAGGTGCTACTTCCCTTTTTACCTCAGTAAGCCACGTAATACACACTTGTCATTGC
AGTGTTGTTTTCTTAGTACAACACCACCAAGCGCCGTGAATGAAGCAATTTCTTCATCCT
ATAAAAACTTCTTCACTGACAGTCAACTGCCCTATTGCAACACAGCTGTGAAGCTGATTT
GTATTTTTTCCTAGTTTGCACTAACTAATTTTACATTTGACCTTCAAAATGAATTATATC
AGTTTTGTGGACAAAGTGTTACCACGTTATTATTTTTGAAAATCTGGTTTTTAGTTTCAT
TTTGTAACCCAAACATGATTGAAACTTCCAATCATTGTATTTTTGCTACATCCTTGTAAA
TAATGATCATGTTACACATGTTTTGGCATAACCCAACTACTATAATCACTGCCAACCTGT
GCTTTTACACAAGTTGCATTCCATTATTCTCATATTGGTTTTGAGTTTTACCCATTTTTA
AGCTGACCCACATTATTGGTGGCTATACTATTTTAGCAATAATGCTTTTTATATCCATAT
TATACCATAGTGATTCCCTGTAACTATTCCCTGGTGCGTGTACCTTTGTATCACTGTTTT
GTACCCACTAGCTTCTGTAACAATTTTATTTTACCCAACTCTGTAACCACCCTTTGTATT
TTCAATCGTTGTAAAATATATCAACTCTAATTCATTAAATCCTGCTTTGTACCTTTACAC
AGCGTACACTAAACCTAAACACTATTTGAGAGTTTATATTGCATACCTCACATCCTATTG
CTCATATATGTGAACAACCAAAGGGCTGCTGATCTGAAATGAATTTTGTAATTGGCTTTC
CATCAATGTTTCTGCTGTACAATTGCACTATGTTTGCCACATTCCGTTTTGTTATTGTTC
ACCAGCAGTATGAAATACCTTCGTGTTAACGTTTCATGACTTCCACCTTTGCCTGACATG
TTTATTCGCTTGTGTAGTAAATATTGTGACATTGCA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[226-276] 2.96E-11 - T[708-760] 2.15E-11 - T[984-1032] 7.81E-5 |
| SMART |
Znf_C2H2_type (IPR013087) - T[228-251] 0.0011 - T[257-280] 0.64 - T[288-311] 39.0 - T[329-352] 0.0013 - T[680-703] 0.32 - T[709-732] 0.011 - T[738-760] 0.0071 - T[776-799] 2.3 - T[974-998] 120.0 - T[1005-1028] 0.013 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[228-256] 13.152 - T[257-285] 12.009 - T[329-352] 10.408 - T[680-708] 9.91 - T[709-737] 13.256 - T[738-765] 11.988 - T[776-804] 8.559 - T[1005-1033] 11.489 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[230-251] . - T[259-280] . - T[331-352] . - T[682-703] . - T[711-732] . - T[740-760] . - T[776-799] . - T[1007-1028] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN112_HUMAN | 26.952 % | 88.6 | 1.09E-17 |