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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S5...' > 
  2. Transcript 'KH2012:KH.C7.760.v1....' > 
  3. Transcript 'KH2012:KH.C2.321.v1....' > 
  4. Transcript 'KH2012:KH.C12.441.v1...' > 
  5. Transcript 'KH2012:KH.C8.611.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.611.v1.A.nonSL3-1

Possible name(s)

SNED1

Gene model

KH2012:KH.C8.611

Location

KhC8 [6,126,123 / 6,129,960]

Sequences

Amino acid sequence

Length: 491

>KH.C8.611.v1.A.nonSL3-1
VKMFVLVLLSFLLSSFNSANAACVNNFQCPLNAECRQGTCVAVGGVTTTLIPPEQNRGAC
TPNPCQNDCRCVPSCKHASGFYCTSPSGFLGKTCTIPAPSLSCSENTITISVSAQLVREY
SMSTTGSYIYMGQGPTSLLQGGTAMSSACAVSSPVNGYYTISIPLPFTGCGTRVSGPTTG
TVNTNSFTNEIWLNTNGVLFDVPIPIFRWTCSYTENYSIVTRLQPTVEPLRIVKGDTVMR
QAVAELCKVQSACPGACPPLFSVKEGAAYTVSEMIHLTISLQTPTMTGQALYLYSLTLSC
SSTPGSSDAVSLVTAGCSSNILSTTFGRNGQSGTVCVSFRVPRMMGCNMMYIHGSMKSAV
PSTLSACPGADGVILRSASSVPDTDDVNNTDVRKRRSAVTTTTNDDDNTTAIVSVGPIFI
FPGSPGTPQSELFPGAAVLPESDDSLPEGVPTSPLAKQSMIIVTTIVVVATLLLICIVLY
VYVTRARNVHK

Nucleotide sequence

Length: 1,702

>KH2012:KH.C8.611.v1.A.nonSL3-1
TTGTTACGTGTTAAGTTCTCGAAGCGCTTCGTTTTTGCTGAGTTAAAATGTTCGTTCTCG
TTTTGTTAAGTTTCCTGCTTTCGAGCTTCAACTCGGCGAATGCTGCTTGCGTGAACAATT
TCCAATGTCCGTTGAACGCTGAATGCAGGCAGGGCACTTGCGTTGCAGTTGGTGGCGTTA
CTACTACATTGATCCCACCAGAACAAAACCGAGGGGCATGCACGCCCAACCCTTGCCAGA
ATGATTGCAGATGTGTGCCATCGTGCAAACACGCGTCGGGTTTCTATTGCACGAGTCCTT
CCGGCTTTCTCGGGAAGACTTGCACCATACCCGCCCCGTCGTTATCCTGCAGTGAAAACA
CGATCACTATTTCTGTATCTGCGCAGTTAGTTCGCGAATATTCCATGTCTACAACCGGTA
GCTACATTTACATGGGTCAAGGTCCTACTTCTTTACTGCAAGGTGGCACCGCAATGTCTA
GTGCGTGTGCAGTATCCTCCCCTGTGAACGGCTACTATACGATTTCTATTCCGCTCCCGT
TCACTGGGTGTGGTACCAGAGTCAGCGGGCCCACCACCGGAACTGTTAACACGAATAGCT
TCACCAACGAAATCTGGTTGAACACGAACGGTGTTTTATTCGACGTCCCAATCCCCATCT
TTCGATGGACTTGTTCCTACACCGAGAACTACTCCATCGTTACAAGACTGCAACCAACAG
TTGAACCACTACGCATCGTCAAAGGCGACACCGTAATGCGACAAGCGGTGGCCGAACTTT
GCAAAGTTCAATCTGCGTGCCCTGGTGCGTGTCCACCATTGTTCAGTGTGAAGGAAGGAG
CTGCTTACACGGTGTCGGAGATGATTCATCTCACTATATCGTTACAAACCCCGACGATGA
CCGGCCAAGCTTTATACTTGTACAGCCTGACCCTTTCTTGCTCAAGCACCCCAGGTTCCT
CTGATGCGGTTTCGTTGGTCACCGCGGGTTGTAGCAGCAACATATTGTCCACTACATTCG
GTCGCAACGGTCAAAGCGGGACAGTGTGCGTATCATTCAGAGTTCCCAGGATGATGGGTT
GTAACATGATGTACATTCACGGGTCGATGAAGTCTGCAGTTCCTAGCACACTTTCGGCTT
GTCCAGGTGCAGACGGTGTTATCCTGCGCTCGGCTTCCTCGGTACCCGATACCGATGACG
TCAATAACACTGACGTCAGAAAGCGACGATCAGCTGTTACTACAACCACAAACGATGACG
ACAACACGACTGCTATAGTGAGTGTTGGGCCCATCTTTATATTCCCGGGTTCGCCAGGTA
CCCCGCAGTCCGAGCTTTTCCCTGGAGCGGCAGTGTTGCCGGAATCTGACGACTCCTTAC
CGGAAGGTGTCCCGACGTCTCCACTCGCCAAACAGTCGATGATTATCGTCACGACAATCG
TCGTCGTCGCAACTTTATTGTTAATCTGCATTGTGTTGTATGTTTACGTCACACGAGCTC
GTAACGTTCATAAATAAATAATTTATTAATTTCATACTTGTCATTTGTGGAAGTTGAAAA
GGGAAACTCTTAATTGCTTGGGTTAAACATTCAAAAACTTGTGCTTCTGGAAAATCTTGT
AAAATAGTTGGCAATTAAAAGTAGATATGGAAGTCGTTTCGGATAACTGTCGCTGATACT
ATAATAAATACATTCTGACGTG

InterProScan

ProSiteProfiles
ZP_dom (IPR001507) - T[102-374] 11.997

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value