- Transcript 'KH2012:KH.C8.562.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.562.v1.A.SL1-1
Possible name(s)
NEDD8; UBTD1; UBTD2
Gene model
Location
KhC8 [1,773,620 / 1,777,962]
Amino acid sequence
Length: 231
>KH.C8.562.v1.A.SL1-1
STMGACLGTNRGRHEHRHSNSRHPGTGTWKNQTLRKEHPKWRSDVPLTEGQLRSKRDEFW
DTAPAFDGRKEIWDALKAAAAALESGDNTLAQAIIDGANISLPQGTMLDCYDELGALYQV
PVYCLSPPVNLIRGVTASQSRVEEELVEIKPGDKSFPIKVRLRGEKEIRLKVLPNDSVLN
SKRRLEAQESIAVSKQRWFFSGKMMSDSVHLQQYKLEKGYVIQCVVREQDD
Nucleotide sequence
Length: 1,503
>KH2012:KH.C8.562.v1.A.SL1-1
ATTAAAATTATAAAAGGTACATATTATGTTTAACTAGTGATTTCATTTTTCAAAATGAAA
TAAGACACTTTAAGGATACCACAGTACCAAATATAAATGTTGTGATCACTGATCCACAAT
GGGTGCTTGTTTAGGTACGAATCGTGGGCGTCACGAACATAGACACAGCAATTCAAGACA
TCCAGGTACAGGCACTTGGAAAAATCAAACTCTGCGAAAAGAACATCCAAAGTGGAGAAG
TGACGTGCCTTTAACTGAGGGGCAATTACGAAGTAAAAGGGACGAGTTTTGGGATACAGC
TCCAGCTTTTGATGGTCGAAAAGAAATCTGGGATGCATTAAAAGCAGCAGCTGCTGCTTT
AGAGAGTGGAGACAATACACTGGCCCAAGCAATTATTGATGGAGCAAATATTTCCCTTCC
CCAGGGTACAATGCTTGACTGCTATGATGAACTTGGTGCACTCTACCAAGTTCCTGTGTA
TTGTTTATCCCCGCCGGTGAACTTAATTCGTGGAGTCACTGCTTCACAATCAAGGGTAGA
GGAGGAACTTGTGGAAATCAAACCTGGGGATAAATCTTTTCCAATTAAAGTTCGACTGCG
AGGTGAAAAAGAAATAAGATTAAAAGTTCTTCCAAATGATTCAGTATTAAACTCAAAACG
GAGACTAGAAGCACAGGAAAGTATAGCAGTGAGCAAACAACGTTGGTTTTTCTCTGGAAA
AATGATGTCGGACTCTGTACACTTACAGCAATATAAACTTGAAAAAGGTTATGTGATCCA
GTGTGTTGTAAGAGAGCAAGATGACTGAAGACCACACTGCATTCCTATTGCCTTAAACCT
GCTGGCCACATGCACTGGTTGGCCGACTCTACATATCCTCAAGGCTGTGAAGTATACTAA
CTGCGAGATGAGCATTTTTGTTTCTATCAACTATTCCCGCTGCGTTTTTTAGTTGTTTTT
TTCCTAAAAGTTTTGTACTTTTTAGTGTACGCGAGGTTTTTTCTTGCTTTATGATTATTG
CTTCCATTTTCAACGGTTTAAATTACTAACATTGCTCTTTTGGAAGTTTAAACTTGGCCA
TTAATAGCTAGTAAGTCCTTCTCCTCATCTTACAGTTACAAGGTTTATTTTGCCCAGTTT
AAATTTATGTTAATTAAGCCAATATTTTTCTAACGCAATGCTAGGTGTTCTATTAAATTG
TTTTTAAACATGCATGAGAACCTGTTGAAATGAAATGTAGGAGTGTAGATTTCCTTTCTT
TTTTATTTGAACTGTTTTTTAACAATGTTCAAAAGCGTTTGTAAATACTTGTTTGAAACA
AAACGAAACATTCATTTAAAGTTGCATTTTAAACGTCCATACATTGGCTATTGTAGCAAA
TGCGACTTTAGTTATTTTTGCTGCATTGTTAGTTTTTCATGTGATATTGTTTTACCCCAT
ACACTCTTGTATGTATGTGCAATTAAATTGTTCATCTTAAATACATACAGCTTTCATATA
AGA
| Pfam |
UBD (IPR032752) - T[31-133] 5.3E-37 |
| Gene3D |
UBD_sf (IPR038169) - T[48-125] 4.5E-34 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[147-226] 1.11E-15 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[156-231] 14.665 |
| SMART |
Ubiquitin_dom (IPR000626) - T[156-227] 3.3E-5 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[158-228] 1.1E-15 |
| PRINTS |
Ubiquitin (IPR019956) - T[166-186] 2.4E-5 - T[187-207] 2.4E-5 - T[208-229] 2.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBTD1_HUMAN | 52.212 % | 219 | 3.93E-72 |
| UBTD2_HUMAN | 50.439 % | 240 | 2.17E-80 |
