- Clone 'AHC0AAA174YD14' >
- Region 'REG00001553' >
- Transcript 'KH2012:KH.C8.511.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.511.v1.A.SL2-1
Possible name(s)
MEOX1; MEOX2; PDX1
Gene model
Location
KhC8 [4,603,146 / 4,605,420]
Amino acid sequence
Length: 176
>KH.C8.511.v1.A.SL2-1
MCDAYYQPECVIDGDCNQFTQLQSIYDSNPQEVQTVLDSPPTCASHAESYPIQYSGQYYD
NTHQTLHNLHWNQAPPVRCQEQVNNFSSHQHVTQPESQVSYISSTSSPDTSEVEIRKKER
TSFTHDQVRQLEADFMENHYLTRLRRYELALKLNLTERQIKVWFQNRRMKLKREKT
Nucleotide sequence
Length: 683
>KH2012:KH.C8.511.v1.A.SL2-1
TATGTGTGATGCGTATTATCAACCGGAATGTGTTATAGACGGAGATTGTAATCAATTCAC
GCAACTACAAAGTATTTACGATAGCAATCCTCAAGAGGTCCAGACAGTTCTTGATTCCCC
TCCAACATGTGCAAGCCACGCAGAGTCCTATCCTATTCAGTATTCGGGACAATACTACGA
CAACACACACCAGACGTTGCACAACCTGCATTGGAACCAAGCACCACCAGTGAGATGCCA
GGAACAAGTAAACAACTTTAGCAGCCATCAGCATGTGACGCAACCTGAGAGCCAAGTTTC
ATATATTTCTTCAACGTCATCGCCAGATACCTCCGAGGTCGAGATTCGTAAAAAAGAAAG
AACTTCATTTACTCACGACCAAGTCCGTCAACTAGAAGCAGATTTCATGGAGAATCATTA
CCTTACAAGACTTCGACGATATGAGCTTGCGCTTAAACTGAACTTAACAGAACGACAGAT
AAAAGTCTGGTTTCAAAACAGACGGATGAAACTAAAGCGTGAAAAGACTTGAAACTGCAG
ATTCTAGGAAATGTGTTTCTGCTTCTGTCTTGCAGGCAATCTGCATATGTGTTTCATTAT
GTCTTATTATGTATATAGCTGAACCTATACGTGTATGCACGCTTCCAAGGTATATATACC
AAACAATACAAACTACACTTGAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[97-175] 8.98E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[114-174] 21.589 |
| SMART |
Homeobox_dom (IPR001356) - T[116-176] 8.8E-21 |
| Pfam |
Homeobox_dom (IPR001356) - T[117-173] 1.8E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[117-175] 1.26149E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[138-149] 3.3E-8 - T[153-163] 3.3E-8 - T[163-172] 3.3E-8 |
| PRINTS |
HTH_motif (IPR000047) - T[145-154] 9.8E-5 - T[154-170] 9.8E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[149-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDX1_HUMAN | 54.545 % | 80.5 | 1.04E-18 |
| MEOX2_HUMAN | 66.667 % | 95.5 | 3.49E-24 |
| MEOX1_HUMAN | 67.797 % | 93.6 | 8.81E-24 |