- Transcript 'KH2012:KH.C8.511.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.511.v1.A.ND1-1
Possible name(s)
MEOX1; MEOX2; PDX1
Gene model
Location
KhC8 [4,603,146 / 4,605,539]
Amino acid sequence
Length: 216
>KH.C8.511.v1.A.ND1-1
GKLNGTCAVSFSSATVIHKASVSTTVLISLWSNYSYYLFSMCDAYYQPECVIDGDCNQFT
QLQSIYDSNPQEVQTVLDSPPTCASHAESYPIQYSGQYYDNTHQTLHNLHWNQAPPVRCQ
EQVNNFSSHQHVTQPESQVSYISSTSSPDTSEVEIRKKERTSFTHDQVRQLEADFMENHY
LTRLRRYELALKLNLTERQIKVWFQNRRMKLKREKT
Nucleotide sequence
Length: 802
>KH2012:KH.C8.511.v1.A.ND1-1
GGGAAGTTAAACGGGACATGCGCTGTTAGTTTTTCCTCAGCTACTGTTATACACAAAGCT
TCAGTGTCAACCACAGTGTTGATTAGTCTGTGGTCAAATTATAGTTACTACCTTTTCAGT
ATGTGTGATGCGTATTATCAACCGGAATGTGTTATAGACGGAGATTGTAATCAATTCACG
CAACTACAAAGTATTTACGATAGCAATCCTCAAGAGGTCCAGACAGTTCTTGATTCCCCT
CCAACATGTGCAAGCCACGCAGAGTCCTATCCTATTCAGTATTCGGGACAATACTACGAC
AACACACACCAGACGTTGCACAACCTGCATTGGAACCAAGCACCACCAGTGAGATGCCAG
GAACAAGTAAACAACTTTAGCAGCCATCAGCATGTGACGCAACCTGAGAGCCAAGTTTCA
TATATTTCTTCAACGTCATCGCCAGATACCTCCGAGGTCGAGATTCGTAAAAAAGAAAGA
ACTTCATTTACTCACGACCAAGTCCGTCAACTAGAAGCAGATTTCATGGAGAATCATTAC
CTTACAAGACTTCGACGATATGAGCTTGCGCTTAAACTGAACTTAACAGAACGACAGATA
AAAGTCTGGTTTCAAAACAGACGGATGAAACTAAAGCGTGAAAAGACTTGAAACTGCAGA
TTCTAGGAAATGTGTTTCTGCTTCTGTCTTGCAGGCAATCTGCATATGTGTTTCATTATG
TCTTATTATGTATATAGCTGAACCTATACGTGTATGCACGCTTCCAAGGTATATATACCA
AACAATACAAACTACACTTGAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[137-215] 8.55E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[154-214] 21.589 |
| SMART |
Homeobox_dom (IPR001356) - T[156-216] 8.8E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[157-215] 1.19829E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[157-213] 2.7E-21 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[178-189] 5.2E-8 - T[193-203] 5.2E-8 - T[203-212] 5.2E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[189-212] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDX1_HUMAN | 54.545 % | 80.9 | 2.42E-18 |
| MEOX2_HUMAN | 66.667 % | 96.3 | 6.54E-24 |
| MEOX1_HUMAN | 67.797 % | 94 | 1.77E-23 |