- Molecular Tool 'Ci-Bra -3.5Kb/Ci-Su(H)DBD' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Mooccu.CG.ELv1_2.S63...' >
- Region 'REG00000149' >
- Transcript 'KH2012:KH.C8.396.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.396.v1.A.nonSL6-1
Possible name(s)
FOXD1; FOXD3; FOXD4
Gene model
Location
KhC8 [2,622,953 / 2,625,590]
Amino acid sequence
Length: 424
>KH.C8.396.v1.A.nonSL6-1
FIFQHRIRCVMMTVQCCVQYNTSEDKSDHKRFMMNRIESHGASRDNVIGSAYPQQQADAI
LQNWKSSAAGPTRNKHRDGESRSPVPGKPYQRPDVTKSSPNEMSAIECMRNAVQQMQEKV
QASAAKTTQHSALNDTYVDVTSLSSPATLVRESFRQNWLPKSPMVDERSSSPVSSEGNPP
ARCASLSGEDETREKDEELRKIGEEMEEYSNESKKNVKPPYSYIALITMSILQSPDKKLT
LSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTMDPEAED
MFDNGSFLRRRKRFKRQQRDPFRDNVLAALNAASPYGRPYGLAATQQAAIMAASMNPYAY
MNPLPAHIPLLPPHEINNRQAALMAFGSSRLPQMTTESSVSIFPTLPMQSNTEHGCENPS
RELR
Nucleotide sequence
Length: 2,271
>KH2012:KH.C8.396.v1.A.nonSL6-1
GTTCATATTTCAGCATCGAATCCGTTGTGTGATGATGACAGTGCAGTGTTGTGTGCAATA
TAATACAAGCGAGGATAAGAGTGATCATAAACGTTTCATGATGAATCGTATTGAATCTCA
CGGAGCATCACGAGATAATGTCATCGGTTCGGCCTACCCTCAACAACAAGCAGACGCCAT
TTTGCAAAACTGGAAATCATCGGCGGCAGGTCCGACTCGAAACAAACATCGTGACGGGGA
ATCAAGGTCGCCGGTCCCAGGCAAACCTTACCAAAGACCCGATGTCACAAAGTCATCACC
AAATGAGATGTCAGCCATAGAATGCATGAGAAACGCAGTTCAACAGATGCAGGAAAAAGT
TCAAGCTTCAGCGGCAAAAACAACTCAACATTCAGCTTTGAACGATACCTACGTAGACGT
GACATCATTATCGTCACCAGCCACCCTTGTACGAGAGTCGTTTCGCCAAAACTGGTTGCC
GAAATCACCGATGGTGGACGAACGATCTTCGTCGCCTGTGTCGTCAGAGGGAAACCCCCC
TGCCCGCTGTGCGTCATTAAGCGGCGAGGACGAGACGAGAGAGAAAGATGAAGAATTAAG
GAAGATCGGAGAAGAAATGGAAGAATATTCGAACGAATCAAAGAAGAATGTAAAACCTCC
GTATTCATACATCGCTCTTATAACAATGTCGATACTTCAGTCTCCCGATAAGAAACTTAC
TCTGAGTGGGATTTGCGATTTCATCATGAACCGTTTCCCTTATTACAAAGAGAAGTTCCC
AGCTTGGCAGAACTCGATACGTCATAACCTTTCACTGAACGACTGCTTCGTGAAAATTCC
ACGCGAGCCTGGTAACCCTGGAAAGGGAAATTACTGGACCATGGATCCTGAGGCGGAAGA
TATGTTCGACAATGGTTCCTTTCTACGAAGAAGAAAACGATTCAAACGACAACAGAGAGA
TCCGTTCCGGGATAATGTCCTTGCAGCTTTGAATGCAGCTAGCCCTTACGGTCGTCCATA
CGGTCTTGCAGCAACACAACAAGCAGCTATCATGGCAGCATCAATGAATCCATATGCTTA
CATGAACCCACTGCCTGCACATATACCGTTGCTACCTCCGCATGAAATCAACAACAGACA
AGCTGCTTTAATGGCTTTTGGATCATCAAGGTTACCTCAGATGACGACCGAATCATCTGT
GTCCATCTTCCCCACCCTTCCCATGCAATCCAACACTGAGCACGGATGCGAGAATCCAAG
CCGCGAACTTCGCTAACGCTGTTGCTCTTCACTCCGCTAGGGAATCCATTAGAGGGCAGC
AACAAGCCAAGAAACTTCCTCGTAATTCTCCTTTTTCCATCGAATCATTGATCGGAAAGT
CCTCCGATTCTGCTCCCACAACATCCGAACACCACGGCTCCGGATGTTCTTCTCCTTCCT
CCCAAACCTCCGGAAGAGAGAACCCGGTTTCTCCCGTTTCAAAACTCAACCCCGGATTCG
GTCCCTGTATCACTTCGACTCCGAAGTACTCCGGATCAGATCGGGAGCATTTTTTCCAAG
AAACAGGAAGACGCGAATCCGAAGTCCGCGAATCTGCAGCGGCTGCTTCCCGAAGAAGTT
CAGTTTCACCATCAGACTCATTATCCCCTCCCCTGCCGGCTTCACAGCCTTCTTTTCCCG
CGTTGGGTAGCCAATTGAACCCAATGTTTCCATACAACATGGCGCTAAGTTCTCGTATGT
TCCAACAGAACCAATCGTATCCACCAAACCCCTCTATCGCGCAATCGGCGCAACAGTTAA
ACGCACTATCAGCCGCAGGTTTTCTTCCGTCATTAAACGGCTGGCCTTGTTTTGGCAGAA
CTTAAACAAAAAAATGCAATTTTACGCCAAAACCTCCACAGAAGTGGCAGCTGTGAAACC
TGGTACATTTCTAAGCAATCATAAGCTTTATGTTGCTTACTACACTTCACTCCTTTAGTT
ATTAAACCGTATATACTTCAGCGTGTTTAAATGCGACTCTAATTGGACCCATTAGCGTAC
AATGCAACACCACCATATTGAAAATTATATTCCAAACATAATACACTGCCATTTATACTG
AGATTATGTATTATATGCAGTACGCATTCCGCAATTACTATACCACACTGTCCATACACA
ATCTCAGACCGTGGTTGTATCTATTTTAAGCATGACACAATTTTACGTTGTTTTCGTTTT
TTTTGACTTTTGTGTTTTTGTTCCGACAAATTAAAATTCTAAACTAAAAAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[204-313] 8.0E-46 |
| SMART |
Fork_head_dom (IPR001766) - T[216-306] 1.9E-60 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[217-312] 1.86E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[218-312] 39.54 |
| CDD |
Fork_head_dom (IPR001766) - T[218-295] 7.49577E-52 |
| PRINTS |
Fork_head_dom (IPR001766) - T[218-231] 3.3E-22 - T[239-256] 3.3E-22 - T[262-279] 3.3E-22 |
| Pfam |
Fork_head_dom (IPR001766) - T[218-302] 2.2E-37 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[262-268] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXD4_HUMAN | 76.786 % | 199 | 1.82E-59 |
| FOXD3_HUMAN | 75.362 % | 201 | 1.69E-59 |
| FOXD1_HUMAN | 87.778 % | 182 | 8.44E-53 |