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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1073.v1...' > 
  2. Region 'REG00001260' > 
  3. Transcript 'KH2012:KH.C8.370.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.370.v1.A.nonSL3-1

Possible name(s)

GTSF1; GTSF1L

Gene model

KH2012:KH.C8.370

Location

KhC8 [1,552,589 / 1,556,483]

Sequences

Amino acid sequence

Length: 297

>KH.C8.370.v1.A.nonSL3-1
LYTRHKKVGKMDFESPYHVPVYMQSMQDSNKDEMVICPYDPVHRISVKRFVRHIHKCKKN
HPNANMATCPFNARHIIPKPEMEQHIEICPDKDSDINFMVAESEISVIPTSYEELYFGDE
EDWDEEARNNTQSLPMVRGRRRQKRNEINPFPSVYEAEALHKEEEIEPRECPAPPVRQRR
PIPQSVTQNGIHQEQKPSNMQLPPTPSPKSIPVMAAKFTNPVQQNGESAINDKTMVQKTL
LHEKRKLNKLLNQISNMESQQTAGEVLNSDQLEKIGRKSAMKSRLLEVENLLERITL

Nucleotide sequence

Length: 1,709

>KH2012:KH.C8.370.v1.A.nonSL3-1
GACTTTTTAACTCTACACAAGACACAAGAAAGTAGGAAAAATGGATTTCGAATCACCGTA
CCATGTTCCCGTATACATGCAGTCAATGCAAGATTCAAACAAAGATGAAATGGTGATATG
CCCTTATGATCCCGTGCATAGAATCTCCGTAAAAAGATTTGTGCGACACATACACAAGTG
CAAAAAGAATCACCCGAACGCAAACATGGCCACGTGTCCATTCAATGCAAGACATATTAT
TCCAAAACCAGAGATGGAACAGCACATTGAAATATGCCCGGACAAGGACTCTGACATTAA
CTTCATGGTAGCCGAAAGTGAGATTTCTGTCATCCCAACAAGTTATGAGGAACTTTACTT
TGGGGATGAGGAAGATTGGGATGAAGAGGCTCGCAACAATACTCAAAGTCTGCCGATGGT
TCGTGGACGTAGAAGACAAAAGCGAAATGAAATAAACCCGTTTCCATCTGTGTATGAGGC
TGAAGCTCTACATAAAGAAGAAGAAATAGAACCAAGAGAGTGTCCTGCCCCTCCAGTTAG
ACAAAGGCGACCCATTCCACAATCTGTTACTCAGAATGGAATACATCAAGAGCAGAAACC
GAGCAATATGCAATTGCCTCCAACACCAAGTCCCAAAAGTATCCCAGTAATGGCAGCCAA
GTTTACAAACCCAGTTCAACAAAATGGTGAATCAGCCATTAATGATAAAACTATGGTTCA
AAAGACGTTGCTGCATGAAAAGAGAAAACTAAACAAACTGTTGAATCAGATAAGCAACAT
GGAGTCACAGCAAACTGCTGGCGAGGTTCTTAACTCCGACCAGCTTGAAAAAATAGGACG
AAAATCAGCTATGAAAAGTAGACTGTTAGAGGTGGAGAATTTGCTGGAAAGAATTACCTT
GTGAATATATAACCATGCCACCTCTTTGTGCTAAGTAACCATGTCACCTCTTTGTGCTAA
GTACTATGTTTCCTACCAGTTTAGTATGAAACTACCTTCCTTTCCTATGTTATGTTTTAG
TTATATAGTAGGGTGGGGGAAGATGGGACACCTTTAGCACAAAATATATAAATATCCTGA
TCGTGTTTTGAACAATTAACAGCGGTTTATGAAAGTCGCAAGGACAAGGTTTTATAATTC
TTTAAATATTCTTTGTTTGCTACCAAAATGTACGAGAAAATAGAATGAAAAGGTGTCCCA
CCTTCCCCCATCCTACTATACAACATCTTAAACCGCTTTTTTTTATTACACATACACCAA
ACTGTTTTTCTACTAATACTTTTGCTTGTGTTTACGTTTTGATAGAACTACTGCTTTACA
TTTTGTTACACTTCATATTGCCATATGGTGCTATTTCTTTCACATTATGTTATCAACACA
CTGCTTTTAGAGTCTCTTTCTCACACGATTTTATTTCTCAGGTTTTTTTTGTACCGCACC
GCTTTCGTTTATTAATACAGCAAACTGATTTTATACTAATAATAATTACTCTTTGCCCAA
AAGCTTTAGGGCTGTTTTTAAACTCAAGGTTTTTTGTACCCATACCGCTTTTTTTATAAA
AACAGCGAACTGATTTTAAACCATTAATAATTGTTGCTTCGCACAAAAGCATTAGGGCTG
TTTTTAAACTCATACAAATTTAATCCCATTTCCCAGGTGAACATCATTTAATAAATCAAA
ACATAATTTTCATGCATAAATTAGCACAA

InterProScan

SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[32-65] 4.64E-7 - T[65-96] 6.55E-5
ProSiteProfiles
TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-61] 15.312 - T[66-93] 16.479
Pfam
TRM13/UPF0224_CHHC_Znf_dom (IPR022776) - T[34-58] 7.1E-7 - T[66-90] 3.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GTSF1_HUMAN 37.5 % 75.1 1.92E-16