- Transcript 'KH2012:KH.C8.316.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.316.v2.R.ND2-1
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
KhC8 [1,319,622 / 1,361,754]
Amino acid sequence
Length: 1,089
>KH.C8.316.v2.R.ND2-1
TYSMTRQNVATNDAFHALSGFVNGKRCLNCRENCPGFTLHKWRKCCVHCKCSVSYHIGHA
SEYLDRNRRFSNCSDDSLMTMPAAATEQTRGTMPSNIDPKSAGLDQDIVIRGPTENRVRR
RQSRRQASVRHNRNSASDEENDGDSGCALEEYAWVPPNLTPDQVRYYFTSLPEDKVPLVD
SIGDKYRVRQLLHQLPPHDDKVCYCNDLSDEEKRELRLFSEQRKKDYLGCGKIRILPLNT
PGTPCSECGILVKGGDIVAVASRAEPGMCWHPACFVCSVCRELLVDLFYFYQDGRLYCGR
HHAETLKPRCSACDEIIFSDECTEAEGRHWHMDHFCCFECDQVLGGQRYIMRDGKPNCTQ
CFEALYAEYCDMCGDLIGLDAGQMQYEGQHWHATDNCFCCNRCRKSLLGRPFLPKHGRIF
CSKACSLGEDPGHSESDSQHSSSQYENPQLPTSHNVRRSLNLDNLSIHDKPWEDKGELSP
ASNNVFIDAADMYPTSAAVAASTRYSKGHTRPSHPYLDGMDPVNAEMGTENDAGFKGAAT
SRKTVTNSVTSPTSTVSSRTTSKNGVQFPQNTYNSTDSSGYNSSSTLDAIEHQQNAALKA
AMGSNYSYGKSKQTPCSKRPQNGEDGHVSATEFTPFHPAAPRASPPTIIGSRKLAPEIKK
TIDSLTKATEIDNKSPPVNVASMLPKSAVPIPAPRARYAPSLTPSPPSTAASELTSPWMH
KSHARTDSPLDSREFPSPPVPVPSPPTESKEHSSPLQRSVSERLANKRRSREPISLPEQT
ISEHPRLRSDDKHVSVENDKTSPELKSILKKSRNPSKSFRNRERGSLSGSLDRLEEFHRK
SDVMKYASDDEDGAGFGDAQGDFSSFQRGQRLYSSARFPEEVTEKPRSQNQGGRPRSQHR
TRFKDNSALDRTHSALNLDELDCAIARRNPKPGKTCSKLSGKSTCSKKLKRTRSTDFAFE
RSAATPTSSRKNRRTKRFVEDEEEDGWCSTCTSSSDDSDYERWDGLGTSPPTSPLSAMRR
GSAPVGVRVNMTRRQPPHPFLANADSALAASAAGFNSNGVYRPSMPRNFSTTSHMRYRRR
QQKKHCIVM
Nucleotide sequence
Length: 4,062
>KH2012:KH.C8.316.v2.R.ND2-1
GCACAGCGTGAATGACGATCAAACACGTCGTATAGCTTGTACACAGACCATTTAGCTCAA
AAGCTAGTTAAATGCTGCCTTCAGTTATACGAGAATAATATTATTGAGAGCATTAGTCGA
AAACAATTGTGTATTGCGAAGAAATCTGAACCTATTCGATGACAAGACAGAACGTCGCGA
CGAACGATGCATTCCACGCATTGAGTGGCTTTGTGAACGGCAAGCGGTGTCTTAACTGCA
GAGAAAATTGTCCCGGCTTTACTTTGCATAAGTGGAGGAAGTGCTGCGTTCACTGTAAGT
GTTCGGTGTCATACCACATTGGCCACGCATCGGAATACTTGGATCGAAACCGTCGTTTCA
GCAACTGCAGCGACGACAGTCTTATGACCATGCCAGCGGCCGCTACAGAGCAAACGCGAG
GCACCATGCCTTCAAACATCGACCCTAAATCGGCGGGACTTGACCAGGACATCGTCATTC
GAGGACCGACAGAAAACCGTGTACGTCGACGGCAATCCCGAAGACAAGCGTCGGTGAGAC
ATAATCGGAATTCCGCGTCGGACGAAGAGAACGACGGCGACAGCGGCTGCGCTTTGGAAG
AATACGCTTGGGTGCCACCGAATCTAACCCCGGATCAGGTCCGTTATTACTTCACATCTC
TGCCGGAAGACAAGGTACCACTGGTTGACAGTATTGGAGACAAGTACAGGGTTCGCCAGC
TCTTACATCAGTTACCACCGCACGACGACAAGGTTTGTTACTGTAATGATCTTTCGGATG
AGGAGAAACGAGAACTCCGTCTCTTCAGCGAGCAGAGAAAGAAGGACTATTTGGGATGCG
GGAAGATCAGAATTCTTCCACTTAATACTCCTGGAACTCCCTGTTCGGAGTGCGGAATAC
TTGTAAAAGGGGGTGACATCGTTGCTGTTGCTTCAAGAGCAGAGCCAGGGATGTGCTGGC
ATCCAGCCTGCTTCGTGTGCTCTGTGTGTAGAGAACTTCTAGTTGATCTTTTTTACTTTT
ACCAGGACGGACGTTTGTACTGTGGACGTCATCACGCTGAGACTTTAAAGCCTCGTTGCT
CAGCTTGTGACGAGATCATTTTCTCCGACGAATGCACTGAGGCAGAGGGCCGACACTGGC
ATATGGATCATTTCTGCTGCTTCGAGTGCGACCAGGTGTTGGGCGGACAGCGCTATATCA
TGCGCGACGGGAAACCTAACTGCACCCAGTGCTTTGAAGCACTTTACGCCGAGTATTGTG
ATATGTGCGGCGATCTCATCGGTCTAGACGCTGGGCAGATGCAATACGAAGGACAACACT
GGCACGCGACAGATAATTGCTTCTGTTGCAACCGCTGTCGCAAGTCTCTACTCGGGAGGC
CTTTTCTCCCAAAACACGGCCGAATCTTTTGCTCGAAAGCTTGCAGCCTTGGCGAGGACC
CTGGCCATTCTGAATCCGATTCCCAGCATAGCTCATCGCAATACGAGAACCCGCAACTAC
CAACTTCCCACAACGTACGCCGCAGCCTTAACCTTGACAATCTTTCAATCCATGACAAAC
CGTGGGAAGACAAGGGCGAGCTGAGTCCTGCCTCAAACAATGTTTTCATCGATGCAGCAG
ATATGTACCCGACATCGGCTGCTGTAGCTGCTAGTACTCGGTACAGCAAAGGACATACCC
GACCGTCCCACCCCTACCTTGACGGTATGGACCCTGTTAACGCAGAAATGGGCACTGAAA
ACGACGCTGGCTTCAAAGGCGCGGCAACCTCAAGAAAAACTGTTACCAATTCGGTCACAT
CGCCTACCAGCACCGTATCGTCTCGAACCACGTCGAAAAACGGCGTGCAGTTTCCACAGA
ACACCTACAACAGCACCGACAGTAGCGGTTACAACAGCAGCAGTACTTTAGACGCAATCG
AGCACCAACAAAACGCAGCACTCAAGGCCGCGATGGGTTCAAACTACAGTTATGGAAAAT
CGAAGCAAACCCCATGCTCAAAACGGCCCCAAAACGGCGAAGACGGTCACGTTTCAGCGA
CAGAGTTTACCCCATTCCACCCTGCCGCGCCCCGAGCATCGCCACCGACCATTATCGGCA
GTCGGAAACTAGCGCCCGAAATCAAAAAGACAATCGACTCGCTGACTAAAGCGACCGAAA
TAGACAACAAATCACCACCAGTCAACGTAGCTTCTATGCTGCCCAAGTCAGCGGTTCCCA
TTCCCGCCCCTCGGGCCCGATATGCCCCTTCCTTAACCCCCTCCCCACCTAGCACCGCGG
CATCGGAGCTCACAAGTCCATGGATGCACAAAAGCCACGCTCGCACCGACTCGCCCCTAG
ACTCGCGGGAATTTCCCTCACCTCCTGTCCCGGTCCCCTCACCCCCCACGGAGAGCAAGG
AGCACAGCAGCCCTCTCCAGCGGAGCGTCAGCGAGCGACTTGCCAACAAACGTCGCAGCA
GGGAACCCATCAGTCTTCCTGAACAAACAATATCTGAACACCCACGATTACGATCAGATG
ACAAACACGTTTCTGTCGAGAATGATAAAACCAGTCCGGAGTTAAAGAGCATATTGAAGA
AATCTAGAAACCCGTCCAAATCTTTCCGAAACCGTGAGCGTGGTTCCTTGTCAGGATCCT
TAGATCGCCTGGAAGAATTCCACCGCAAATCCGATGTAATGAAATACGCCTCTGACGATG
AGGATGGTGCAGGGTTCGGAGACGCACAAGGGGACTTCTCTAGTTTCCAACGCGGGCAAC
GTCTTTACAGCAGCGCTCGGTTCCCCGAAGAAGTTACCGAAAAGCCTCGATCGCAAAATC
AAGGCGGGCGACCAAGATCGCAGCACAGAACGCGTTTTAAGGATAATTCAGCGCTCGACC
GAACGCACAGCGCTCTCAATTTGGACGAGCTCGATTGCGCCATCGCGCGACGAAATCCTA
AACCTGGAAAGACGTGCAGTAAATTATCTGGAAAATCAACGTGCAGCAAAAAGTTAAAGC
GAACACGATCCACCGACTTCGCATTTGAGAGGTCCGCAGCCACTCCTACGTCCTCCCGGA
AGAACAGGAGGACCAAGAGATTCGTTGAAGACGAAGAGGAGGATGGGTGGTGTTCTACTT
GTACATCATCCAGTGATGATAGCGACTACGAGCGCTGGGACGGTTTGGGAACTTCACCCC
CAACAAGCCCACTCAGTGCTATGAGGAGAGGATCAGCCCCGGTTGGTGTTCGAGTCAACA
TGACACGTCGTCAACCTCCCCACCCTTTCCTAGCCAATGCTGATTCGGCGCTCGCTGCAT
CAGCAGCTGGCTTCAACAGCAATGGAGTTTACCGACCTTCAATGCCTCGCAATTTCTCCA
CCACGTCGCATATGCGCTACAGGCGGAGACAGCAGAAAAAGCACTGTATCGTCATGTAAC
CACAAACGCCGTCACGAAAACGAGTGAAATTGATCGAAAAAGTTCCGAAACTAAAAGTTG
GCGCTCCCAGGACGCCTCGTACCTCCCACGCGGTGGCAGTAAAGCACGCGAATCCGCGCC
CATCGTCGATACGAACACGTCAGCATAATTTTTCAGTCAAACAATTGGTGGTGATTGTGA
TGTCACTGTGTAACGTGCACGCATGTACAATGCTTCGGTGTGACGTCATAATGTAGCTGG
CTGTTTAACTTATTCTTTTGCTTTTATTTTTAAATCAATATGTCGAATCGATTACTTACG
AATTTTTGGCAACCAGCAATCTATTTTCGGCAGAGTGCGTTCTTGTTCGATTTGCTTTTT
TAACACAATCTTTGCTTTTGTGCTTACTGAATCTGACCAATTTTTGACCGTTAGCAAATC
GATTTTTCTATTCTCAATTCGCGTTACCTGCATTCGTAACTTTGGCAAACGAGCGATGAA
GTTCTTTTCCCAATATTTTCGCATCTTACATTTCTTGTGTAAATCTTTATAGATATCTAT
TCGTTGGCCTATTCCGAAGCCGCGAGCTTTGACGGACCAATCTGTCCGTGCGTCACTTTG
TCTTTTGTATTCGTAACATAAGCCAATAGAAAAACGAGCACC
| ProSiteProfiles |
PET_domain (IPR010442) - T[133-241] 32.873 |
| CDD |
PET_prickle (IPR033723) - T[141-237] 4.04594E-61 |
| Pfam |
PET_domain (IPR010442) - T[150-234] 2.1E-33 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[243-307] 9.88 - T[308-368] 12.949 - T[369-432] 6.574 |
| SMART |
Znf_LIM (IPR001781) - T[244-301] 3.8E-11 - T[309-361] 7.3E-14 - T[369-424] 7.1E-7 |
| CDD |
LIM1_prickle (IPR033725) - T[245-303] 5.00699E-37 |
| Pfam |
Znf_LIM (IPR001781) - T[245-304] 6.4E-10 - T[310-364] 4.3E-10 - T[370-423] 4.8E-5 |
| CDD |
LIM2_prickle (IPR033726) - T[308-363] 8.95113E-38 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[310-344] . |
| CDD |
LIM3_prickle (IPR033727) - T[368-426] 4.37571E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 60.811 % | 483 | 1.37E-155 |
| PRIC1_HUMAN | 65.878 % | 455 | 5.4E-145 |
| PRIC3_HUMAN | 54.902 % | 456 | 3.93E-148 |
