- Transcript 'KH2012:KH.C8.316.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.316.v1.A.SL3-1
Possible name(s)
PRICKLE1; PRICKLE2; PRICKLE3
Gene model
Location
KhC8 [1,319,622 / 1,331,506]
Amino acid sequence
Length: 1,046
>KH.C8.316.v1.A.SL3-1
KCCVHCKCSVSYHIGHASEYLDRNRRFSNCSDDSLMTMPAAATEQTRGTMPSNIDPKSAG
LDQDIVIRGPTENRVRRRQSRRQASVRHNRNSASDEENDGDSGCALEEYAWVPPNLTPDQ
VRYYFTSLPEDKVPLVDSIGDKYRVRQLLHQLPPHDDKVCYCNDLSDEEKRELRLFSEQR
KKDYLGCGKIRILPLNTPGTPCSECGILVKGGDIVAVASRAEPGMCWHPACFVCSVCREL
LVDLFYFYQDGRLYCGRHHAETLKPRCSACDEIIFSDECTEAEGRHWHMDHFCCFECDQV
LGGQRYIMRDGKPNCTQCFEALYAEYCDMCGDLIGLDAGQMQYEGQHWHATDNCFCCNRC
RKSLLGRPFLPKHGRIFCSKACSLGEDPGHSESDSQHSSSQYENPQLPTSHNVRRSLNLD
NLSIHDKPWEDKGELSPASNNVFIDAADMYPTSAAVAASTRYSKGHTRPSHPYLDGMDPV
NAEMGTENDAGFKGAATSRKTVTNSVTSPTSTVSSRTTSKNGVQFPQNTYNSTDSSGYNS
SSTLDAIEHQQNAALKAAMGSNYSYGKSKQTPCSKRPQNGEDGHVSATEFTPFHPAAPRA
SPPTIIGSRKLAPEIKKTIDSLTKATEIDNKSPPVNVASMLPKSAVPIPAPRARYAPSLT
PSPPSTAASELTSPWMHKSHARTDSPLDSREFPSPPVPVPSPPTESKEHSSPLQRSVSER
LANKRRSREPISLPEQTISEHPRLRSDDKHVSVENDKTSPELKSILKKSRNPSKSFRNRE
RGSLSGSLDRLEEFHRKSDVMKYASDDEDGAGFGDAQGDFSSFQRGQRLYSSARFPEEVT
EKPRSQNQGGRPRSQHRTRFKDNSALDRTHSALNLDELDCAIARRNPKPGKTCSKLSGKS
TCSKKLKRTRSTDFAFERSAATPTSSRKNRRTKRFVEDEEEDGWCSTCTSSSDDSDYERW
DGLGTSPPTSPLSAMRRGSAPVGVRVNMTRRQPPHPFLANADSALAASAAGFNSNGVYRP
SMPRNFSTTSHMRYRRRQQKKHCIVM
Nucleotide sequence
Length: 3,785
>KH2012:KH.C8.316.v1.A.SL3-1
GAAGTGCTGCGTTCACTGTAAGTGTTCGGTGTCATACCACATTGGCCACGCATCGGAATA
CTTGGATCGAAACCGTCGTTTCAGCAACTGCAGCGACGACAGTCTTATGACCATGCCAGC
GGCCGCTACAGAGCAAACGCGAGGCACCATGCCTTCAAACATCGACCCTAAATCGGCGGG
ACTTGACCAGGACATCGTCATTCGAGGACCGACAGAAAACCGTGTACGTCGACGGCAATC
CCGAAGACAAGCGTCGGTGAGACATAATCGGAATTCCGCGTCGGACGAAGAGAACGACGG
CGACAGCGGCTGCGCTTTGGAAGAATACGCTTGGGTGCCACCGAATCTAACCCCGGATCA
GGTCCGTTATTACTTCACATCTCTGCCGGAAGACAAGGTACCACTGGTTGACAGTATTGG
AGACAAGTACAGGGTTCGCCAGCTCTTACATCAGTTACCACCGCACGACGACAAGGTTTG
TTACTGTAATGATCTTTCGGATGAGGAGAAACGAGAACTCCGTCTCTTCAGCGAGCAGAG
AAAGAAGGACTATTTGGGATGCGGGAAGATCAGAATTCTTCCACTTAATACTCCTGGAAC
TCCCTGTTCGGAGTGCGGAATACTTGTAAAAGGGGGTGACATCGTTGCTGTTGCTTCAAG
AGCAGAGCCAGGGATGTGCTGGCATCCAGCCTGCTTCGTGTGCTCTGTGTGTAGAGAACT
TCTAGTTGATCTTTTTTACTTTTACCAGGACGGACGTTTGTACTGTGGACGTCATCACGC
TGAGACTTTAAAGCCTCGTTGCTCAGCTTGTGACGAGATCATTTTCTCCGACGAATGCAC
TGAGGCAGAGGGCCGACACTGGCATATGGATCATTTCTGCTGCTTCGAGTGCGACCAGGT
GTTGGGCGGACAGCGCTATATCATGCGCGACGGGAAACCTAACTGCACCCAGTGCTTTGA
AGCACTTTACGCCGAGTATTGTGATATGTGCGGCGATCTCATCGGTCTAGACGCTGGGCA
GATGCAATACGAAGGACAACACTGGCACGCGACAGATAATTGCTTCTGTTGCAACCGCTG
TCGCAAGTCTCTACTCGGGAGGCCTTTTCTCCCAAAACACGGCCGAATCTTTTGCTCGAA
AGCTTGCAGCCTTGGCGAGGACCCTGGCCATTCTGAATCCGATTCCCAGCATAGCTCATC
GCAATACGAGAACCCGCAACTACCAACTTCCCACAACGTACGCCGCAGCCTTAACCTTGA
CAATCTTTCAATCCATGACAAACCGTGGGAAGACAAGGGCGAGCTGAGTCCTGCCTCAAA
CAATGTTTTCATCGATGCAGCAGATATGTACCCGACATCGGCTGCTGTAGCTGCTAGTAC
TCGGTACAGCAAAGGACATACCCGACCGTCCCACCCCTACCTTGACGGTATGGACCCTGT
TAACGCAGAAATGGGCACTGAAAACGACGCTGGCTTCAAAGGCGCGGCAACCTCAAGAAA
AACTGTTACCAATTCGGTCACATCGCCTACCAGCACCGTATCGTCTCGAACCACGTCGAA
AAACGGCGTGCAGTTTCCACAGAACACCTACAACAGCACCGACAGTAGCGGTTACAACAG
CAGCAGTACTTTAGACGCAATCGAGCACCAACAAAACGCAGCACTCAAGGCCGCGATGGG
TTCAAACTACAGTTATGGAAAATCGAAGCAAACCCCATGCTCAAAACGGCCCCAAAACGG
CGAAGACGGTCACGTTTCAGCGACAGAGTTTACCCCATTCCACCCTGCCGCGCCCCGAGC
ATCGCCACCGACCATTATCGGCAGTCGGAAACTAGCGCCCGAAATCAAAAAGACAATCGA
CTCGCTGACTAAAGCGACCGAAATAGACAACAAATCACCACCAGTCAACGTAGCTTCTAT
GCTGCCCAAGTCAGCGGTTCCCATTCCCGCCCCTCGGGCCCGATATGCCCCTTCCTTAAC
CCCCTCCCCACCTAGCACCGCGGCATCGGAGCTCACAAGTCCATGGATGCACAAAAGCCA
CGCTCGCACCGACTCGCCCCTAGACTCGCGGGAATTTCCCTCACCTCCTGTCCCGGTCCC
CTCACCCCCCACGGAGAGCAAGGAGCACAGCAGCCCTCTCCAGCGGAGCGTCAGCGAGCG
ACTTGCCAACAAACGTCGCAGCAGGGAACCCATCAGTCTTCCTGAACAAACAATATCTGA
ACACCCACGATTACGATCAGATGACAAACACGTTTCTGTCGAGAATGATAAAACCAGTCC
GGAGTTAAAGAGCATATTGAAGAAATCTAGAAACCCGTCCAAATCTTTCCGAAACCGTGA
GCGTGGTTCCTTGTCAGGATCCTTAGATCGCCTGGAAGAATTCCACCGCAAATCCGATGT
AATGAAATACGCCTCTGACGATGAGGATGGTGCAGGGTTCGGAGACGCACAAGGGGACTT
CTCTAGTTTCCAACGCGGGCAACGTCTTTACAGCAGCGCTCGGTTCCCCGAAGAAGTTAC
CGAAAAGCCTCGATCGCAAAATCAAGGCGGGCGACCAAGATCGCAGCACAGAACGCGTTT
TAAGGATAATTCAGCGCTCGACCGAACGCACAGCGCTCTCAATTTGGACGAGCTCGATTG
CGCCATCGCGCGACGAAATCCTAAACCTGGAAAGACGTGCAGTAAATTATCTGGAAAATC
AACGTGCAGCAAAAAGTTAAAGCGAACACGATCCACCGACTTCGCATTTGAGAGGTCCGC
AGCCACTCCTACGTCCTCCCGGAAGAACAGGAGGACCAAGAGATTCGTTGAAGACGAAGA
GGAGGATGGGTGGTGTTCTACTTGTACATCATCCAGTGATGATAGCGACTACGAGCGCTG
GGACGGTTTGGGAACTTCACCCCCAACAAGCCCACTCAGTGCTATGAGGAGAGGATCAGC
CCCGGTTGGTGTTCGAGTCAACATGACACGTCGTCAACCTCCCCACCCTTTCCTAGCCAA
TGCTGATTCGGCGCTCGCTGCATCAGCAGCTGGCTTCAACAGCAATGGAGTTTACCGACC
TTCAATGCCTCGCAATTTCTCCACCACGTCGCATATGCGCTACAGGCGGAGACAGCAGAA
AAAGCACTGTATCGTCATGTAACCACAAACGCCGTCACGAAAACGAGTGAAATTGATCGA
AAAAGTTCCGAAACTAAAAGTTGGCGCTCCCAGGACGCCTCGTACCTCCCACGCGGTGGC
AGTAAAGCACGCGAATCCGCGCCCATCGTCGATACGAACACGTCAGCATAATTTTTCAGT
CAAACAATTGGTGGTGATTGTGATGTCACTGTGTAACGTGCACGCATGTACAATGCTTCG
GTGTGACGTCATAATGTAGCTGGCTGTTTAACTTATTCTTTTGCTTTTATTTTTAAATCA
ATATGTCGAATCGATTACTTACGAATTTTTGGCAACCAGCAATCTATTTTCGGCAGAGTG
CGTTCTTGTTCGATTTGCTTTTTTAACACAATCTTTGCTTTTGTGCTTACTGAATCTGAC
CAATTTTTGACCGTTAGCAAATCGATTTTTCTATTCTCAATTCGCGTTACCTGCATTCGT
AACTTTGGCAAACGAGCGATGAAGTTCTTTTCCCAATATTTTCGCATCTTACATTTCTTG
TGTAAATCTTTATAGATATCTATTCGTTGGCCTATTCCGAAGCCGCGAGCTTTGACGGAC
CAATCTGTCCGTGCGTCACTTTGTCTTTTGTATTCGTAACATAAGCCAATAGAAAAACGA
GCACC
| ProSiteProfiles |
PET_domain (IPR010442) - T[90-198] 32.873 |
| CDD |
PET_prickle (IPR033723) - T[98-194] 6.68956E-61 |
| Pfam |
PET_domain (IPR010442) - T[107-191] 2.0E-33 |
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[200-264] 9.88 - T[265-325] 12.949 - T[326-389] 6.574 |
| SMART |
Znf_LIM (IPR001781) - T[201-258] 3.8E-11 - T[266-318] 7.3E-14 - T[326-381] 7.1E-7 |
| CDD |
LIM1_prickle (IPR033725) - T[202-260] 3.07606E-37 |
| Pfam |
Znf_LIM (IPR001781) - T[202-261] 6.1E-10 - T[267-321] 4.1E-10 - T[327-380] 4.6E-5 |
| CDD |
LIM2_prickle (IPR033726) - T[265-320] 5.88682E-38 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[267-301] . |
| CDD |
LIM3_prickle (IPR033727) - T[325-383] 2.90554E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRIC2_HUMAN | 60.811 % | 484 | 2.19E-156 |
| PRIC1_HUMAN | 65.878 % | 456 | 1.21E-145 |
| PRIC3_HUMAN | 66.333 % | 434 | 4.6E-140 |
