- Transcript 'KH2012:KH.C1.401.v1....' >
- Transcript 'KH2012:KH.C7.522.v1....' >
- Transcript 'KH2012:KH.C8.273.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.273.v2.A.SL4-1
Possible name(s)
RAB11FIP1; RAB11FIP2; RAB11FIP5
Gene model
Location
KhC8 [4,706,158 / 4,715,252]
Amino acid sequence
Length: 420
>KH.C8.273.v2.A.SL4-1
FQIMWSPTDVVVTVRQARNLLVKGKSGSNEAYATIEFCKDKYLTSTDKSTTPRWFTQCSF
TLPQGGVFHNKIVVHVTVMNKRHGKLGLESDDFLGQVSVPLSALNSCDNKERARWYELNG
KKSGNKKERGEVEISFKFISQEKSQVLPVKKEKPMKIISTGFRSKLRRRSEDEDSGVGIS
DGDRTSSMGRGRSYENLSMPSITDQPMPTPFERTFRTSSTNSSPGSLVSARGSAKLKNSN
LSSKAMSVEVLHRPPTNQTTSLYRSNSGTGDSGHGSNASSPEVKPRSTSMTDIHKADCPT
HNTLNKNDSNSVKRNVTHDSSQSRMKPIAPITALYKPKNYYRLDVKELGKVSTIHEEPDT
TLQTMSHKDLVKLASKQKMIIADKNQTIRELEDYIDSLLVKVMVCTPDILDVQSSHITKL
Nucleotide sequence
Length: 1,898
>KH2012:KH.C8.273.v2.A.SL4-1
ATATTTGTAGTTCCAAATAATGTGGAGTCCTACTGATGTTGTAGTGACTGTTCGACAGGC
AAGAAACTTGTTGGTTAAAGGAAAAAGTGGTTCCAATGAAGCATATGCTACTATTGAGTT
CTGCAAAGATAAATATTTAACCTCCACAGATAAATCGACGACTCCTCGATGGTTCACACA
GTGTTCATTCACCCTGCCACAAGGTGGTGTCTTTCACAACAAGATAGTTGTCCATGTTAC
TGTAATGAACAAGAGACATGGAAAACTGGGCTTGGAATCCGACGACTTTCTCGGCCAAGT
TTCAGTCCCTTTATCAGCACTCAACTCGTGTGACAACAAGGAACGTGCAAGATGGTACGA
GTTAAATGGCAAAAAGAGTGGAAATAAAAAAGAGAGAGGGGAAGTAGAGATTTCATTCAA
ATTCATCAGCCAGGAAAAGAGCCAAGTCCTCCCTGTTAAAAAAGAGAAACCAATGAAGAT
CATCAGTACTGGCTTCCGGAGTAAGCTGCGAAGAAGATCAGAAGATGAGGATTCAGGTGT
CGGGATCAGTGACGGGGATCGAACATCTAGCATGGGAAGAGGCAGATCATATGAGAATCT
ATCAATGCCTTCAATAACTGACCAGCCTATGCCGACTCCGTTTGAAAGAACTTTCCGCAC
AAGTTCAACGAACAGCTCTCCTGGTTCATTAGTATCAGCAAGAGGGTCTGCAAAATTAAA
AAACAGCAACCTATCTTCAAAAGCCATGAGTGTAGAAGTGCTTCATCGCCCTCCAACCAA
CCAAACCACCTCATTATATCGGTCTAACTCAGGTACAGGTGATTCTGGTCACGGTAGCAA
TGCAAGCTCTCCTGAAGTAAAACCTCGAAGCACATCTATGACAGATATTCACAAAGCTGA
TTGCCCCACCCATAACACACTAAACAAGAACGATTCAAACTCAGTGAAACGTAACGTCAC
ACATGACTCGAGCCAAAGTAGAATGAAACCAATCGCTCCCATCACAGCTTTATATAAACC
AAAAAATTATTATCGTTTAGATGTCAAAGAACTTGGAAAAGTGTCCACCATACATGAGGA
ACCAGACACTACATTACAAACAATGTCACATAAAGACCTTGTTAAGTTGGCAAGCAAACA
GAAGATGATAATTGCCGACAAGAACCAAACTATAAGGGAGTTAGAAGATTACATTGACAG
CCTTCTAGTCAAAGTAATGGTTTGTACACCAGATATACTGGATGTTCAGAGCAGCCATAT
CACTAAACTGTGAACATTGATATACGATTAGGAAATATCATTTGTAGAGAAAACGGTGCT
TACGTATTTTCATATCAAATTTATTTTTACCCCATAGCGCTCACACCATACCTTTTCTTT
TTATTGTTTTTTTTCAACCTTTTTTTCGGAATGTTTTTTTTTTGATCTGAATCTGAAGCA
ATGGATTTCTACTTGCATTGTTTTTAAGCAATAATCTGTTTTTGGGAAAAAACTAAAATA
ATAAATTTTCAATTTCTATAGCATAGTGTTAATTTTATCCCTGTGTTGCAAAATCACATC
AGTGTAATGTATTATAAACCCCTCGGTGAATTATTTACTTATTCTAATTTCTTTACCTTT
TGCTCTTTTAACATTTTTTTATGGTGCACCATGTTTGTCGTGCTTAATGATTATAAAAAG
CTGCAAGTTCGCAAAGTGAGTTATTTTGCCAAACTTCATATTGACTAAATGTTATTGCGC
TACATGTTCACTTTTTTTAAATAGCCTGTATTTTCTTTAATATCAACCGTACAAAACTAT
TTTTATGTTATTGCTAGTTTGTGTTTACCTTCTGTTGTTGTTCTGCCTTACCTTGAAGCA
AAATGTATATTTGTGAGATTAAAATAGTACAGTTCTGT
| PANTHER |
FIP_classI (IPR037789) - T[4-261] 2.2E-103 - T[285-327] 2.2E-103 - T[343-419] 2.2E-103 |
| Gene3D |
C2_domain_sf (IPR035892) - T[8-158] 6.6E-20 |
| SMART |
C2_dom (IPR000008) - T[9-113] 7.8E-8 |
| Pfam |
C2_dom (IPR000008) - T[10-118] 2.1E-13 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[10-98] 8.858 |
| ProSiteProfiles |
Rab-bd_FIP-RBD (IPR019018) - T[351-413] 9.489 |
| Pfam |
Rab-bd_FIP-RBD (IPR019018) - T[367-412] 5.9E-10 |
| SUPERFAMILY |
FIP-RBD_C_sf (IPR037245) - T[383-413] 7.32E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RFIP1_HUMAN | 37.143 % | 93.6 | 2.45E-20 |
| RFIP2_HUMAN | 37.143 % | 90.9 | 1.08E-19 |