- Transcript 'KH2012:KH.C8.265.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.265.v1.A.SL3-1
Possible name(s)
HDHD5
Gene model
Location
KhC8 [5,649,749 / 5,656,290]
Amino acid sequence
Length: 447
>KH.C8.265.v1.A.SL3-1
AIIMAVQSICTNILRAGKHKIAQVAASKFYSTKQQDPGFGLLFDIDGVLIRGKKPIPAAQ
KAFRNLTRPDGKFKVPTVFVTNAGNALARTKAEQLSNAMGVEITSEQVMMSHSPLRMFPE
YHDKCVLLSGQGPVDDIAKKIGFTNYVTIDQIRNAFPNLDMVDHQRRPKLSPSSRSDPFP
KIDAVILFGEPVRWETNLQIIIDVLLTHGKLDGPALDNDDEQLPVLACNMDLLWMSDSHM
PRFGHGTFLHCLESVYEKLVGRPLTYSALMGKPSEVTYIYAEQLIKRIAGKMGFTAPIKN
LYAIGDNPMADIYGANLFNKRLKQEQEVKQISIEQSSATPATSQQPWRQLHANIRNITTS
ATDPNSNVIPPKPSPFIREVESCHSVLVCTGVYSPEPGGSKYQIPPVFHGPRDMEFDVSL
CVPTFITHDADEAVNKITELENFDLET
Nucleotide sequence
Length: 1,972
>KH2012:KH.C8.265.v1.A.SL3-1
GGTACTTTTATAATGTGTTTTACACAAAGAACTATACCTCAACATAACTAGGATGAACAT
ATCATTATTACATCAATAATCAACTTTGTGACATCATAATAGGCAATTATCATGGCAGTC
CAATCAATTTGCACGAATATTTTAAGAGCTGGAAAACATAAAATAGCACAAGTTGCTGCT
TCCAAGTTTTATTCTACTAAACAACAGGATCCTGGTTTTGGTTTACTGTTTGACATTGAT
GGTGTTTTAATCCGCGGCAAAAAGCCGATACCAGCTGCTCAAAAAGCGTTCAGGAATCTT
ACACGACCTGATGGAAAATTCAAAGTCCCCACTGTGTTTGTAACTAATGCCGGTAATGCA
TTGGCTAGAACCAAAGCTGAACAACTATCCAATGCTATGGGAGTAGAGATTACATCTGAG
CAAGTGATGATGTCACACAGCCCATTAAGGATGTTTCCGGAATATCACGACAAATGTGTC
TTGTTGTCTGGACAAGGACCTGTTGATGACATCGCAAAAAAGATCGGCTTTACAAATTAT
GTCACAATTGACCAAATAAGAAACGCTTTTCCTAATCTTGATATGGTAGACCATCAACGA
AGGCCTAAACTGTCCCCATCTTCAAGGTCTGATCCATTCCCGAAAATCGACGCCGTTATT
TTATTCGGGGAACCAGTAAGGTGGGAAACCAATCTTCAAATCATCATCGACGTTTTATTA
ACTCATGGCAAACTCGATGGGCCAGCCTTGGATAATGATGATGAACAACTACCAGTGTTG
GCTTGCAACATGGACCTCTTATGGATGTCTGACAGCCACATGCCAAGATTCGGGCACGGT
ACTTTCCTTCATTGTCTTGAGAGCGTTTACGAAAAGTTGGTTGGACGACCCTTGACGTAT
TCTGCTTTGATGGGAAAACCTAGCGAGGTGACGTACATATACGCTGAACAACTTATCAAG
AGAATAGCGGGGAAGATGGGGTTCACTGCTCCAATTAAGAATCTATATGCCATTGGCGAC
AATCCGATGGCAGATATTTACGGAGCAAATCTTTTTAATAAGCGACTTAAGCAAGAGCAA
GAAGTGAAACAGATATCTATTGAACAAAGTTCCGCGACCCCGGCGACGTCGCAGCAGCCG
TGGCGTCAACTCCACGCCAATATACGGAATATAACGACAAGCGCCACTGATCCAAACTCA
AATGTGATTCCCCCCAAACCGTCTCCGTTCATCCGCGAAGTCGAATCGTGTCACTCCGTT
CTTGTTTGTACAGGGGTTTACTCTCCAGAACCAGGGGGCAGTAAGTACCAGATACCCCCT
GTGTTCCATGGACCACGAGATATGGAGTTTGACGTCAGTTTATGCGTCCCAACTTTTATC
ACACATGATGCTGATGAGGCTGTAAATAAAATCACTGAACTCGAGAACTTTGACCTAGAA
ACCTAACAACTGTGGCTGTATATGTTACTGGAACGGAGCTAAATAATCAATGTTGTTGAT
ATAACTTTTTGTAATTCACGCATTTGTAATTCATTACGTCTCATGCCCTGTATCACAAAA
TCCGTTACCTGTATATTTTCACAATTAATCAATATTCCAGTTTTATTGGAATTTTTTAAA
AAATGTTCACCTTGTAAAAAACAGTTCATGTTGAATGTTCGAGAAACCATAAATACGAAG
GTTTTAAAAACTTGCAATATATGTTCAGTATCCTAACTGCCATTCTAATGTATGCGCGGT
GTGTTTTTATGTTTTCTGTTCTCTGATAGTTTTTAATTCTTTCAATATTAATATATACAC
AATCTGCTTTTCTTGTATTCAAAATTAAATTTGTTTATTGCGTTCCTAGAAAATTTAGAA
TACTGCTTCTATGAAGCTTAAAATGTTTGCTTTTATTTCTGGCAGTATCTTTCTTCTTAT
TGTGATAGCAGTAGTTATAATACGTTGGTGGATTAAAATTTTATCTTCTTTT
| TIGRFAM |
HAD-SF_hydro_IIA_CECR5 (IPR006353) - T[39-322] 1.9E-96 |
| Pfam |
HAD-SF_hydro_IIA (IPR006357) - T[41-144] 1.1E-20 |
| SUPERFAMILY |
HAD-like_sf (IPR036412) - T[41-146] 6.24E-28 - T[179-318] 6.24E-28 |
| TIGRFAM |
HAD-SF_hydro_IIA (IPR006357) - T[42-316] 1.9E-55 |
| Gene3D |
HAD_sf (IPR023214) - T[42-110] 7.1E-68 - T[111-270] 7.1E-68 - T[271-318] 7.1E-68 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDHD5_HUMAN | 46.053 % | 387 | 3.76E-132 |
