- Transcript 'KH2012:KH.C8.248.v1....'
Transcript Model
Transcript Id
KH2012:KH.C8.248.v1.A.nonSL4-1
Possible name(s)
COL19A1; COL21A1; COL24A1
Gene model
Location
KhC8 [5,996,820 / 6,011,853]
Amino acid sequence
Length: 690
>KH.C8.248.v1.A.nonSL4-1
VSSAGVGTDTFTRTTPRDYSRRVWSAKMFMNKRRVILLVVALLLVTADARKRKRKKNRKS
RANDLITRSRRQGEPDPPADCPVCPAGPAGQPGPPGPPGENGIQGDPGPDGFAGIDGLDG
ERGPPGPQGFQGVSGQKGEPGEIGAPGTEGLIGPAGIPGSLGLPGPAGPQGPPGDVNTVE
GPPGRPGAPGPRGPPGLPGPSGGATAGERVVSNGEVGFVGPPGYPGPKGHKGYKGEPGPD
GKQGPKGDAGPEGEQGPAGPGGESGPRGARGYPGEDGRKGEVGPAGVPGEMGAPGEQGLQ
GAEGPPGVPGERGAKGGTGDRGPLGNPGGPGLPGEPGLPGRNGADGIPGTPGERGRPGES
GPKGTEGAIGAPGNSGEQGIQGQPGERGFPGIKGHKGASGMTGAKGEPGNDGNEGPEGNP
GPQGTAGTPGERGSPGTPGENGQRGPGGPPGIIGPEGPRGQSGPRGPQGESGPRGVPGLQ
GPPGRMPSDQKILEVCRRVLRDEMRGMMAATRPRGIITGGAPGRPGPVGPPGQQGPQGQS
GLPGKTGMQGAQGVPGMPGRTGPKGFGGDKGDRGAPGIGSVGLPGPAGPPGPQGSPGFGK
DGRNGERGEPGLPGPTGYIGPQGSVGPPGYCDPSTCLMGQVRGIQQPKGPNGQKGPDAAD
SPLGSEPPAGTNRRRAARTRHRPEMNDIQF
Nucleotide sequence
Length: 2,595
>KH2012:KH.C8.248.v1.A.nonSL4-1
AGTTAGTAGTGCGGGCGTCGGCACCGACACTTTTACCCGCACCACTCCAAGAGACTACTC
ACGGCGCGTTTGGAGCGCCAAGATGTTCATGAACAAGAGGCGAGTGATCCTCTTGGTCGT
GGCGCTTCTGCTTGTAACGGCGGATGCGAGGAAGCGAAAGAGAAAGAAGAACCGGAAGAG
CAGAGCAAATGATCTGATCACTCGGAGCAGAAGACAAGGAGAGCCGGACCCACCAGCGGA
TTGCCCGGTTTGTCCAGCGGGACCTGCAGGACAACCAGGACCCCCAGGACCACCCGGTGA
GAACGGAATCCAAGGAGATCCTGGACCAGATGGTTTCGCTGGAATTGATGGACTTGATGG
TGAAAGAGGACCACCAGGACCCCAGGGGTTTCAGGGAGTCTCTGGTCAAAAGGGAGAACC
AGGAGAAATTGGTGCACCTGGAACAGAGGGACTCATTGGACCTGCAGGGATACCGGGAAG
CCTTGGGTTACCTGGTCCAGCTGGCCCACAAGGACCTCCAGGTGATGTGAACACCGTTGA
GGGACCTCCTGGACGACCAGGTGCTCCTGGACCAAGGGGACCACCAGGACTTCCCGGACC
ATCTGGAGGCGCTACGGCTGGTGAAAGAGTGGTTTCAAATGGTGAAGTTGGTTTTGTTGG
ACCACCAGGTTATCCCGGACCCAAGGGTCATAAGGGATACAAAGGTGAACCCGGTCCTGA
TGGAAAACAAGGTCCAAAGGGTGATGCCGGTCCTGAGGGAGAACAAGGACCAGCTGGTCC
TGGCGGTGAATCTGGTCCACGTGGGGCACGAGGTTACCCGGGAGAAGATGGGAGAAAGGG
AGAAGTAGGCCCTGCAGGAGTACCTGGAGAAATGGGTGCACCTGGTGAACAAGGTTTACA
GGGAGCTGAAGGTCCTCCTGGAGTCCCAGGAGAGAGGGGAGCCAAGGGAGGAACTGGGGA
TCGAGGTCCTCTTGGAAACCCTGGAGGACCCGGACTTCCTGGAGAACCGGGTCTACCCGG
TAGAAATGGAGCTGATGGTATCCCAGGAACCCCAGGAGAACGGGGACGACCAGGAGAGTC
AGGACCAAAAGGAACAGAAGGTGCCATAGGAGCTCCTGGTAATTCAGGAGAACAAGGTAT
TCAGGGTCAACCTGGTGAACGTGGATTCCCTGGAATCAAAGGACACAAAGGAGCATCTGG
TATGACTGGCGCCAAGGGAGAACCTGGTAATGATGGAAATGAGGGACCAGAAGGCAACCC
TGGACCACAGGGAACTGCTGGAACTCCAGGAGAACGTGGATCACCAGGAACACCGGGTGA
AAATGGGCAACGTGGGCCAGGTGGACCACCGGGCATCATTGGACCAGAAGGACCCAGGGG
CCAATCTGGGCCACGAGGACCACAAGGAGAATCTGGACCAAGAGGCGTCCCTGGATTACA
AGGCCCTCCTGGGCGCATGCCAAGTGACCAAAAGATTCTGGAAGTTTGCCGTAGGGTGCT
TCGAGATGAGATGAGAGGTATGATGGCAGCAACCAGACCCCGAGGTATCATCACTGGTGG
AGCTCCTGGAAGACCTGGACCTGTTGGACCACCTGGACAGCAAGGACCACAAGGACAATC
TGGTCTTCCTGGTAAAACTGGAATGCAAGGTGCACAGGGTGTTCCTGGAATGCCTGGACG
TACTGGACCCAAAGGATTTGGTGGTGATAAAGGTGACAGAGGAGCGCCAGGAATTGGCAG
CGTTGGTCTTCCAGGACCTGCTGGTCCTCCAGGACCCCAAGGATCACCAGGGTTTGGTAA
AGATGGTCGTAACGGAGAACGTGGTGAACCCGGCTTACCTGGACCCACAGGTTACATTGG
GCCACAGGGTTCTGTTGGTCCTCCTGGTTACTGCGACCCATCTACTTGCTTGATGGGTCA
AGTCCGTGGCATTCAACAACCTAAAGGTCCAAATGGCCAGAAAGGTCCTGATGCAGCGGA
CAGCCCATTGGGCTCAGAACCACCTGCGGGCACAAACCGTCGCCGTGCTGCACGTACCCG
CCACCGACCCGAGATGAATGATATTCAGTTTTAACTGAAACTAAAAACTACTTTGATTAC
CGCGCGATCGCACCGTGTGGAGATATGACTCAAAATTTGTAATGTAACCAATTTTATCTG
CGTGCGTTATATTTTTCCATCACCGTGCTACAGTATATTGTTGCATCATATTAGCCGTCG
TCATGTTGTCGTCACTGCTTGTTGTCAGTTTGTTTTCCGAAGCGATTTTACATTTTATTA
CATTTTCACGCCTAAAAAGTGTCATGATTTACTGAGATGGCTGCGTTTGTACAAGAGATT
GGAACTTTTTCATATAGTAGGATTTTGAAAGACACCTTTGGCGTACAATATCCAAATATC
CGGATCGTGTTTCAAATAACTAACAACGCTTTATGGGTGTTGTAAGGATACGAATTTGCA
ATTTTTGTTTACTACTAAACGGATGAGAAAATACAATGAAAAAGTGTCCCATTTCCCCCC
ACCCTACTATACAACATTTCACTAAAACTAAAATATCTATGTTGTCCAGTGTGGTTTGGA
CATTAGTTATTACAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COLA1_HUMAN | 44.037 % | 171 | 1.32E-44 |
| COOA1_HUMAN | 40.625 % | 186 | 5.02E-49 |
| CO9A1_HUMAN | 40.32 % | 178 | 8.84E-47 |