Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  2. Clone 'cima819265' > 
  3. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.C8.209.v2....' > 
  5. Transcript 'KH2012:KH.C8.209.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.209.v1.A.nonSL1-1

Possible name(s)

RPS28

Gene model

KH2012:KH.C8.209

Location

KhC8 [2,359,006 / 2,359,899]

Sequences

Amino acid sequence

Length: 70

>KH.C8.209.v1.A.nonSL1-1
IIMERAATTAKLAKVTKVVGRTGSQGQCTQVRVEFLDDSSRSIVRNVKGPVREGDILTLL
ESEREARRLR

Nucleotide sequence

Length: 508

>KH2012:KH.C8.209.v1.A.nonSL1-1
AAATCATCATGGAACGTGCTGCTACCACCGCCAAATTGGCCAAGGTCACCAAAGTCGTCG
GACGTACCGGATCACAAGGACAATGTACACAGGTCCGTGTTGAGTTTCTGGACGACTCCA
GCAGATCAATCGTTCGTAATGTTAAAGGACCAGTAAGAGAGGGAGATATTCTTACCCTGC
TTGAGTCCGAGAGAGAAGCCAGAAGGCTGCGATAAATTAAAAAACTTCCAGTTCCCCAAT
CTGTACACGCATACTTGTGTAAAAACTACTGATGTTGCAACCACAATGCCTCAAAACTCC
TGTTAATATCGAATTAGACACCCATTCGAGCTTGAAAATTGTACAATGCTTAATTCTCAA
TGCTCTGTTTATACATAGAAAGCATAGTCATGTTTCTGGTGACCTGTACATCAATTCTGT
CAATGTGTGAATACGTTAGAATAGTTTGTCGTGTGTTGTGTGTATACAGTGCAAGGGAGC
TGGAAATAAAATTCGATATCATGTCCTG

InterProScan

Hamap
Ribosomal_S28e (IPR000289) - T[3-70] 20.657
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[8-70] 4.11E-26
Pfam
Ribosomal_S28e (IPR000289) - T[9-69] 3.5E-34
PANTHER
Ribosomal_S28e (IPR000289) - T[10-70] 1.2E-38
CDD
Ribosomal_S28e (IPR000289) - T[11-70] 2.24039E-31
ProDom
Ribosomal_S28e (IPR000289) - T[20-51] 6.0E-11
ProSitePatterns
Ribosomal_S28e_CS (IPR028626) - T[61-69] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS28_HUMAN 90 % 114 1.88E-35