Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C8.17.v2.A.SL1-1

Possible name(s)

DIRAS1; DIRAS2; RAP1B

Gene model

KH2012:KH.C8.17

Location

KhC8 [3,708,490 / 3,714,951]

Sequences

Amino acid sequence

Length: 248

>KH.C8.17.v2.A.SL1-1
PIYIQPFSYMAQRGGRHTSTSSPAAGGSTSKATTDEQSADGARARRLRAMPDQSNDYRVV
LFGAGGVGKSSLVLRFIKGTFKETYVPTIEDTYRQIVNCDKNVCTLQITDTTGSHQFPAM
QRLSITRGDAFILVYSVTTRQSIEELKPIYEQIREIKGNLQFVPIYLVGNKCDEEDKKVS
SREGADLSSTWGCGFIETSAKTSHNVHELFQKLLDSEKRRNLSLTVDVCPKKTTDKRKDN
LKSKCVIT

Nucleotide sequence

Length: 1,724

>KH2012:KH.C8.17.v2.A.SL1-1
ATGTAAAGAACATGGTGATATACTGGTTCGTAAAAACGTTTCTTTAATAATAAATGCAAG
ATTGGAACTAAAGACAAGTGACCTATATATATACAACCATTCAGTTATATGGCGCAACGG
GGCGGCAGACATACCAGTACAAGTTCTCCCGCAGCGGGAGGTTCGACGTCCAAGGCAACA
ACGGATGAACAATCGGCAGATGGTGCTAGAGCACGCCGATTACGAGCCATGCCAGATCAG
TCAAATGATTACAGAGTTGTTCTGTTTGGAGCCGGTGGTGTTGGGAAAAGTTCTTTAGTG
CTGCGATTTATTAAAGGTACCTTCAAAGAGACGTATGTACCTACGATTGAAGACACGTAT
AGACAGATCGTAAACTGCGACAAGAATGTTTGCACACTACAAATCACCGACACCACTGGA
TCGCATCAGTTCCCTGCCATGCAACGTTTGTCTATAACTAGGGGCGATGCCTTTATACTT
GTGTATTCTGTTACAACGAGGCAATCTATTGAAGAACTTAAACCGATATACGAACAGATC
CGTGAAATAAAAGGCAATCTTCAATTCGTCCCCATTTACTTAGTGGGCAACAAATGCGAC
GAAGAAGACAAAAAAGTTTCGTCGAGAGAAGGCGCCGATTTATCGTCAACGTGGGGATGC
GGGTTTATCGAAACATCCGCCAAAACCAGTCACAATGTCCATGAACTGTTTCAGAAACTT
TTGGACTCAGAAAAGCGAAGAAATCTAAGTTTAACTGTCGACGTTTGTCCAAAGAAAACA
ACTGACAAACGAAAGGATAACTTGAAGTCCAAATGCGTCATCACGTGATGAAAACTAAAA
CGGATGACATCTAGTCAACCGTGGAACGATTAGAACCAATTTATTTTTGAATTATTTGTT
TACTGGATCATACTGTATCCAATGTAGCAACAAAGGCATAAGAGCGTTCAATAAAACTTG
CTATAAGATTTATATGCCACATATCAGCGAACTCACACACAGAAGACTAATAGTCGTCAC
CCTGACACAGTGTGTTTGCCTCTAATCAAAGGATACGGCAGTGTGTGTGTTCTTGAACAA
GACATTTAACCTCGATTGCTCCAACTGATTGGTCATTTATGGTTGCCTAAGTTGTCAGTC
ATACATACAGCAATACTGAGTTGGAGCAATGACAGTGAAGTATTTTTCCCAAAGACACAT
TTGACCACAGTAGTGGCAACATTCAGAAGTGAGTTTTGTCATAATGAAATTATTTCTCCA
ACCCATTTTTTGTCACAATGAGAGCGGTGGACCCACCAAATCTTGGCCTAGGTACATAAA
AATATTGGGTAAATGTCCTGTCTAAAAACACACCCGTTAACAATAACAGCATAGTCATAC
TTAGCCATTGTTCAAGGTCCGGAGATTAAAAAAGATACCTGATGTATTTCATCAAATATG
ATAAACATTGAATAACTTTACGATATTTCGCATGAAAAAATACAACAGCTTAAAAATACA
ACACTTTAAATTGGCGTTAATTCGATAATTTCACTAACAGTAATTGAAATAAATATAAAA
CAATTAAAATTGATTTAAATAGTTCAAGATGTTCTCTTTTCAATAAACTTTTTTCGTTTT
TCTTCTAATTTTTTTTGAGCCCACATTTCTAAAACCTTTTTTCTTTCATTTATCATTTTT
TCGTATTGTTTCCCAGATTTCACAGATTTTTCTAATTGATCATC

InterProScan

PANTHER	Small_GTPase_Ras (IPR020849) - T[50-247] 6.4E-95
ProSiteProfiles	Small_GTPase_Ras (IPR020849) - T[52-248] 32.919
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[55-215] 1.57E-45
TIGRFAM	Small_GTP-bd_dom (IPR005225) - T[55-213] 2.0E-24
Pfam	Small_GTPase (IPR001806) - T[58-215] 1.3E-45

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RAP1B_HUMAN	44.91 %	152	1.84E-46
DIRA2_HUMAN	69.347 %	298	2.19E-103
DIRA1_HUMAN	64.646 %	258	1.07E-87