- Transcript 'KH2012:KH.C14.340.v1...' >
- Transcript 'KH2012:KH.C8.143.v3....' >
- Transcript 'KH2012:KH.C8.143.v5....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v5.A.SL5-1
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,431 / 4,439,993]
Amino acid sequence
Length: 613
>KH.C8.143.v5.A.SL5-1
DIISLLLHIYFVNMSEEKCDKVDADVSPDCVKTECPKVLAPLRKKRPSTKLLVKSTDLNI
LCKVCGDKASGFHYGVHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNKCQFCRFKK
CVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEISESFLQHI
SLTQERVNACWESRKALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDDGKPMAPEM
TLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPSTSSTP
SLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLEKEPRL
KETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPTKLVSP
CDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNGICELT
EFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNFVYQLG
VAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKVLFALE
YQLSISHPHKPRS
Nucleotide sequence
Length: 2,090
>KH2012:KH.C8.143.v5.A.SL5-1
CGGATATTATTAGTTTATTACTACATATCTATTTTGTTAATATGAGTGAGGAAAAATGTG
ATAAGGTTGACGCCGATGTTTCTCCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTG
CACCATTACGAAAAAAGCGACCTTCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATA
TACTATGCAAAGTTTGTGGAGATAAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTG
AAGGGTGCAAGGGATTTTTTCGACGGACCATTCGACTCAAAATTGAATACGAAACTTGTG
TGCAGTCATGCAAAGTCGATCTTAAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGA
AATGTGTTGGACTTGGAATGTCGCGTGATGCAATTAGATTTGGCCGAATGCCCAGACATG
AGAAGCAACAAATTATTCAAGAAATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGG
GAAATGTACTTGGCTATCAAAAGCTAATCACAGAAATATCGGAATCGTTTTTGCAACATA
TTTCACTCACGCAAGAGCGAGTAAATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATA
AAGCAAAAACATTACACACATTTCATGACATTCCTGCGTGTTTCCCGAATTTGTCGACAT
ATTATGCCCAGTTTAAATCATTTACCACGCAAGATGACGGGAAACCCATGGCTCCTGAAA
TGACTCTAAGTGACCATTTGAAAAGCTTCTTAAATTCCACCAACCGAAATAAATCAAATG
TTTCTAACAATGGCCAAAGCAAACCGGTTATGGAACCAGCACCAGACATCCAATCATCTG
AACTTACCAGTTCAAGTCCCACTGATCAGTTAAATTCAAGACCAAGCACTTCTTCAACCC
CCAGCCTAAGCTCACAGCAACATAGTTTTGAACTAAAAGGAATTTTGGATTTTATCTCCA
TGCCTCCAAATAGTAGTTCACAGCGAGATCCTTTCCACGGTACAATGCAAAATTCAACAG
CCAATGGGTCTTTAAACAAGCCAAGCAAATGCGACGACAAATTGGAAAAGGAACCCAGAT
TAAAAGAAACTCCAACTAATGCATCAACTGCCTTTCAAACTATGAAGAATTTAAGCAACA
TCAAAACTTTTCAATCTATGTATGAAACAATATGTTCCCCCTCTGGTGAGTCGTTCAAAT
TATTACTTGAACAAAATCCTGGGTTTTTGGAAGGCATGGACCCGACCAAACTGGTTTCTC
CATGTGATGAAATGCTCACTCCTGATCTTAAAGCGAGACTCCTGTTTGCATCACAAGTTT
TTAAAAAAAATATTGGAAAAGATAAGCCAACGATCTATAAAAATGTTATTGGAAGCAAAA
TAGTGCAGATTCTTTACAGTGATTTTCAAGCAAGGGTTGTCAATGGAATATGCGAGCTTA
CTGAGTTTGCCAAGCGCCTTCCAAATTTCCATGATATATCTCTTCAAGATCAGGTAATTC
TATTAAAGTATGGAAGCTATGAGACCATGTTTGTACTCTTCAGTCGATTAATTTATGGAG
AAGGCATGATTTTACCCAAGTCCAACATATACGTCACATTCAACTTTGTGTATCAACTTG
GTGTTGCTGGAGACATAATGAAATCGAAATTCTTATTTGCCAAGAAGATGTTGGCACTAG
AACTAACAGACGATGAAATGGCTCTCTTTGTTGCTATGATTATTCTCTGTCCAGATCGAC
CCGAAATCAACGACCGCAAATTGGTAGAGCGAATACAGGAAAAAGTTTTATTTGCATTGG
AATATCAGCTCTCTATATCTCACCCTCACAAACCAAGGTCTTAATAAATAGGGTGGGGGA
AGACGGAACATCCTTTTATTTTATTTTCTTATTTTATTTGGTAGTAAACAAATGTGTCCC
GTCTTCCCCACCCCACTATAAGAATACTTCAAACCAAAAGAACATATGCAGGGATAAAAC
AGCATTTGTTAAAACATACTTACAGTTAAAAAATATTTACATTTAATGTTTAATTATTTT
GAAGATAAGCTACTAATAGAAGCAAAAGTATATAATATATAATTTTTCAT
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[59-152] 3.6E-33 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[59-129] 2.6E-33 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[59-133] 17.525 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[61-128] 3.0E-26 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[62-88] . |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[62-78] 1.0E-17 - T[78-93] 1.0E-17 - T[110-118] 1.0E-17 - T[118-126] 1.0E-17 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[122-132] 7.5E-15 - T[471-492] 7.5E-15 - T[492-508] 7.5E-15 - T[559-574] 7.5E-15 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[454-612] 1.97E-43 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[468-489] 2.4E-6 - T[494-513] 2.4E-6 - T[559-581] 2.4E-6 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[470-613] 1.3E-8 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[478-602] 6.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 51.515 % | 158 | 4.08E-42 |
| PPARD_HUMAN | 42.328 % | 162 | 5.53E-44 |
| PPARA_HUMAN | 69.149 % | 153 | 1.71E-40 |