Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 598

>KH.C8.143.v5.A.SL4-1
EEKCDKVDADVSPDCVKTECPKVLAPLRKKRPSTKLLVKSTDLNILCKVCGDKASGFHYG
VHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNKCQFCRFKKCVGLGMSRDAIRFGR
MPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEISESFLQHISLTQERVNACWESRK
ALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDDGKPMAPEMTLSDHLKSFLNSTNR
NKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPSTSSTPSLSSQQHSFELKGIL
DFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLEKEPRLKETPTNASTAFQTMK
NLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPTKLVSPCDEMLTPDLKARLLF
ASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNGICELTEFAKRLPNFHDISLQ
DQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNFVYQLGVAGDIMKSKFLFAKK
MLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKVLFALEYQLSISHPHKPRS

Nucleotide sequence

Length: 2,044

>KH2012:KH.C8.143.v5.A.SL4-1
TGAGGAAAAATGTGATAAGGTTGACGCCGATGTTTCTCCCGATTGTGTTAAAACCGAATG
CCCCAAAGTGCTTGCACCATTACGAAAAAAGCGACCTTCTACAAAGCTATTGGTGAAGTC
AACGGATTTGAATATACTATGCAAAGTTTGTGGAGATAAAGCGTCTGGATTTCACTATGG
TGTCCATGCATGTGAAGGGTGCAAGGGATTTTTTCGACGGACCATTCGACTCAAAATTGA
ATACGAAACTTGTGTGCAGTCATGCAAAGTCGATCTTAAAAGTCGGAACAAATGTCAATT
CTGTCGATTTAAGAAATGTGTTGGACTTGGAATGTCGCGTGATGCAATTAGATTTGGCCG
AATGCCCAGACATGAGAAGCAACAAATTATTCAAGAAATAGAAAAAAAATCTAACAAGAC
TGGCTCCACCTCGGGAAATGTACTTGGCTATCAAAAGCTAATCACAGAAATATCGGAATC
GTTTTTGCAACATATTTCACTCACGCAAGAGCGAGTAAATGCATGTTGGGAGTCGAGAAA
AGCACTTGGAGATAAAGCAAAAACATTACACACATTTCATGACATTCCTGCGTGTTTCCC
GAATTTGTCGACATATTATGCCCAGTTTAAATCATTTACCACGCAAGATGACGGGAAACC
CATGGCTCCTGAAATGACTCTAAGTGACCATTTGAAAAGCTTCTTAAATTCCACCAACCG
AAATAAATCAAATGTTTCTAACAATGGCCAAAGCAAACCGGTTATGGAACCAGCACCAGA
CATCCAATCATCTGAACTTACCAGTTCAAGTCCCACTGATCAGTTAAATTCAAGACCAAG
CACTTCTTCAACCCCCAGCCTAAGCTCACAGCAACATAGTTTTGAACTAAAAGGAATTTT
GGATTTTATCTCCATGCCTCCAAATAGTAGTTCACAGCGAGATCCTTTCCACGGTACAAT
GCAAAATTCAACAGCCAATGGGTCTTTAAACAAGCCAAGCAAATGCGACGACAAATTGGA
AAAGGAACCCAGATTAAAAGAAACTCCAACTAATGCATCAACTGCCTTTCAAACTATGAA
GAATTTAAGCAACATCAAAACTTTTCAATCTATGTATGAAACAATATGTTCCCCCTCTGG
TGAGTCGTTCAAATTATTACTTGAACAAAATCCTGGGTTTTTGGAAGGCATGGACCCGAC
CAAACTGGTTTCTCCATGTGATGAAATGCTCACTCCTGATCTTAAAGCGAGACTCCTGTT
TGCATCACAAGTTTTTAAAAAAAATATTGGAAAAGATAAGCCAACGATCTATAAAAATGT
TATTGGAAGCAAAATAGTGCAGATTCTTTACAGTGATTTTCAAGCAAGGGTTGTCAATGG
AATATGCGAGCTTACTGAGTTTGCCAAGCGCCTTCCAAATTTCCATGATATATCTCTTCA
AGATCAGGTAATTCTATTAAAGTATGGAAGCTATGAGACCATGTTTGTACTCTTCAGTCG
ATTAATTTATGGAGAAGGCATGATTTTACCCAAGTCCAACATATACGTCACATTCAACTT
TGTGTATCAACTTGGTGTTGCTGGAGACATAATGAAATCGAAATTCTTATTTGCCAAGAA
GATGTTGGCACTAGAACTAACAGACGATGAAATGGCTCTCTTTGTTGCTATGATTATTCT
CTGTCCAGATCGACCCGAAATCAACGACCGCAAATTGGTAGAGCGAATACAGGAAAAAGT
TTTATTTGCATTGGAATATCAGCTCTCTATATCTCACCCTCACAAACCAAGGTCTTAATA
AATAGGGTGGGGGAAGACGGAACATCCTTTTATTTTATTTTCTTATTTTATTTGGTAGTA
AACAAATGTGTCCCGTCTTCCCCACCCCACTATAAGAATACTTCAAACCAAAAGAACATA
TGCAGGGATAAAACAGCATTTGTTAAAACATACTTACAGTTAAAAAATATTTACATTTAA
TGTTTAATTATTTTGAAGATAAGCTACTAATAGAAGCAAAAGTATATAATATATAATTTT
TCAT

InterProScan

SMART	Znf_hrmn_rcpt (IPR001628) - T[44-114] 2.6E-33
ProSiteProfiles	Znf_hrmn_rcpt (IPR001628) - T[44-118] 17.525
Gene3D	Znf_NHR/GATA (IPR013088) - T[44-137] 3.5E-33
Pfam	Znf_hrmn_rcpt (IPR001628) - T[46-113] 2.9E-26
ProSitePatterns	Znf_hrmn_rcpt (IPR001628) - T[47-73] .
PRINTS	Znf_hrmn_rcpt (IPR001628) - T[47-63] 9.1E-18 - T[63-78] 9.1E-18 - T[95-103] 9.1E-18 - T[103-111] 9.1E-18
PRINTS	Nuclear_hrmn_rcpt (IPR001723) - T[107-117] 6.9E-15 - T[456-477] 6.9E-15 - T[477-493] 6.9E-15 - T[544-559] 6.9E-15
SUPERFAMILY	NHR_like_dom_sf (IPR035500) - T[439-597] 1.84E-43
PRINTS	ThyrH_rcpt (IPR001728) - T[453-474] 2.3E-6 - T[479-498] 2.3E-6 - T[544-566] 2.3E-6
SMART	Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[455-598] 1.3E-8
Pfam	Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[464-587] 6.4E-9