- Clone 'ciem841h09' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C1.82.v1.A...' >
- Transcript 'KH2012:KH.C14.353.v2...' >
- Transcript 'KH2012:KH.C8.143.v4....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v4.A.SL5-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,431 / 4,441,979]
Amino acid sequence
Length: 657
>KH.C8.143.v4.A.SL5-2
DIISLLLHIYFVNMSEEKCDKVDADVSPDCVKTECPKVLAPLRKKRPSTKLLVKSTDLNI
LCKVCGDKASGFHYGVHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNKCQFCRFKK
CVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEISESFLQHI
SLTQERVNACWESRKALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDDGKPMAPEM
TLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPSTSSTP
SLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLEKEPRL
KETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPTKLVSP
CDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNGICELT
EFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNFVYQLG
VAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKVLFALE
YQLSISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEIMQDMK
Nucleotide sequence
Length: 2,618
>KH2012:KH.C8.143.v4.A.SL5-2
CGGATATTATTAGTTTATTACTACATATCTATTTTGTTAATATGAGTGAGGAAAAATGTG
ATAAGGTTGACGCCGATGTTTCTCCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTG
CACCATTACGAAAAAAGCGACCTTCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATA
TACTATGCAAAGTTTGTGGAGATAAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTG
AAGGGTGCAAGGGATTTTTTCGACGGACCATTCGACTCAAAATTGAATACGAAACTTGTG
TGCAGTCATGCAAAGTCGATCTTAAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGA
AATGTGTTGGACTTGGAATGTCGCGTGATGCAATTAGATTTGGCCGAATGCCCAGACATG
AGAAGCAACAAATTATTCAAGAAATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGG
GAAATGTACTTGGCTATCAAAAGCTAATCACAGAAATATCGGAATCGTTTTTGCAACATA
TTTCACTCACGCAAGAGCGAGTAAATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATA
AAGCAAAAACATTACACACATTTCATGACATTCCTGCGTGTTTCCCGAATTTGTCGACAT
ATTATGCCCAGTTTAAATCATTTACCACGCAAGATGACGGGAAACCCATGGCTCCTGAAA
TGACTCTAAGTGACCATTTGAAAAGCTTCTTAAATTCCACCAACCGAAATAAATCAAATG
TTTCTAACAATGGCCAAAGCAAACCGGTTATGGAACCAGCACCAGACATCCAATCATCTG
AACTTACCAGTTCAAGTCCCACTGATCAGTTAAATTCAAGACCAAGCACTTCTTCAACCC
CCAGCCTAAGCTCACAGCAACATAGTTTTGAACTAAAAGGAATTTTGGATTTTATCTCCA
TGCCTCCAAATAGTAGTTCACAGCGAGATCCTTTCCACGGTACAATGCAAAATTCAACAG
CCAATGGGTCTTTAAACAAGCCAAGCAAATGCGACGACAAATTGGAAAAGGAACCCAGAT
TAAAAGAAACTCCAACTAATGCATCAACTGCCTTTCAAACTATGAAGAATTTAAGCAACA
TCAAAACTTTTCAATCTATGTATGAAACAATATGTTCCCCCTCTGGTGAGTCGTTCAAAT
TATTACTTGAACAAAATCCTGGGTTTTTGGAAGGCATGGACCCGACCAAACTGGTTTCTC
CATGTGATGAAATGCTCACTCCTGATCTTAAAGCGAGACTCCTGTTTGCATCACAAGTTT
TTAAAAAAAATATTGGAAAAGATAAGCCAACGATCTATAAAAATGTTATTGGAAGCAAAA
TAGTGCAGATTCTTTACAGTGATTTTCAAGCAAGGGTTGTCAATGGAATATGCGAGCTTA
CTGAGTTTGCCAAGCGCCTTCCAAATTTCCATGATATATCTCTTCAAGATCAGGTAATTC
TATTAAAGTATGGAAGCTATGAGACCATGTTTGTACTCTTCAGTCGATTAATTTATGGAG
AAGGCATGATTTTACCCAAGTCCAACATATACGTCACATTCAACTTTGTGTATCAACTTG
GTGTTGCTGGAGACATAATGAAATCGAAATTCTTATTTGCCAAGAAGATGTTGGCACTAG
AACTAACAGACGATGAAATGGCTCTCTTTGTTGCTATGATTATTCTCTGTCCAGATCGAC
CCGAAATCAACGACCGCAAATTGGTAGAGCGAATACAGGAAAAAGTTTTATTTGCATTGG
AATATCAGCTCTCTATATCTCACCCTCACAAACCAAGGTTGTTCGCCCACTTACTTTTAA
AGATGGCGGAACTCCGGGAGCTGGTATCGAAGCATGTTGTCATGGTGCAGAAATTGGCGG
ACGCTAAGGATTTCGTCCCACCTCTGCTTTGTGAGATCATGCAGGACATGAAATAACGAT
TTTTGCGCACGTATAACGTGGTTTTGGCTACTCTATGCATATTAAAGCTCAAGCTGAGAT
TGTGGGGACAGCTTGTTCTAATGTGATGGGTATTTATTATTTCCTTCATGCAACCAACAT
TGTACATGAGATTTTTTTTTAATTTCAAGAAAGAATTGTAATTAACAATGCTTTTCAAAG
TTACATACATTTAACTCCCAATCTAGTTTATATTTTTTGTAACGTGTTTCCAGTGTGTGT
TGTAAAGTGGTGATGTATTGTGCAACTTTTTTGTTCCTCCGGCGCAAGTGAATATTTGTT
TTGAACCTGCCACTGTGATGTTAATTGTTTTGTAATTTATCTTTTATCGCATTGGTACTA
TGGGTGCTTTTTTTTGTGCTTTTCCAGGTTAAGACAAGCTTTGTGTTCTAAGTTTTCGGT
AAATTAGAGCTTGAAATTGAACAAAGATTCCATTTATTGTATAAGCGATATTTCTGTACT
CCGTGCAAAAAATGCCATGTTTTATAATTTATTGCTCTCAAGAAATCGAAAATATTTAAG
CGACTTTGTCGATGCCGCTATCGGTCGTGGATAAATAGGGTTGAATTTCCGAGAAAGTAT
AATGACGATTAAGTTAATGAAAATAAAAATAATTATTT
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[59-129] 2.6E-33 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[59-152] 4.0E-33 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[59-133] 17.525 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[61-128] 3.3E-26 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[62-88] . |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[62-78] 1.3E-17 - T[78-93] 1.3E-17 - T[110-118] 1.3E-17 - T[118-126] 1.3E-17 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[122-132] 5.6E-20 - T[471-492] 5.6E-20 - T[492-508] 5.6E-20 - T[559-574] 5.6E-20 - T[616-633] 5.6E-20 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[454-653] 5.51E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[468-489] 2.9E-6 - T[494-513] 2.9E-6 - T[559-581] 2.9E-6 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[470-628] 3.9E-22 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[478-633] 2.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 51.515 % | 158 | 6.69E-42 |
| PPARD_HUMAN | 42.328 % | 162 | 8.17E-44 |
| PPARA_HUMAN | 69.149 % | 153 | 2.23E-40 |