- Transcript 'KH2012:KH.L18.5.v1.A...' >
- Transcript 'KH2012:KH.C8.143.v4....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v4.A.SL3-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,334 / 4,441,979]
Amino acid sequence
Length: 664
>KH.C8.143.v4.A.SL3-2
NLSLTKADIISLLLHIYFVNMSEEKCDKVDADVSPDCVKTECPKVLAPLRKKRPSTKLLV
KSTDLNILCKVCGDKASGFHYGVHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNKC
QFCRFKKCVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEIS
ESFLQHISLTQERVNACWESRKALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDDG
KPMAPEMTLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSR
PSTSSTPSLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDK
LEKEPRLKETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMD
PTKLVSPCDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVV
NGICELTEFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTF
NFVYQLGVAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQE
KVLFALEYQLSISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEIM
QDMK
Nucleotide sequence
Length: 2,715
>KH2012:KH.C8.143.v4.A.SL3-2
TTTCATATATTATCATTAAGTATGTATTCGCCGGATATCGGTAGAAAACCTTGTTCAAGT
TGGTGTTGAGAAGTATAAAATTTATCATTGACCAAAGCGGATATTATTAGTTTATTACTA
CATATCTATTTTGTTAATATGAGTGAGGAAAAATGTGATAAGGTTGACGCCGATGTTTCT
CCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTGCACCATTACGAAAAAAGCGACCT
TCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATATACTATGCAAAGTTTGTGGAGAT
AAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTGAAGGGTGCAAGGGATTTTTTCGA
CGGACCATTCGACTCAAAATTGAATACGAAACTTGTGTGCAGTCATGCAAAGTCGATCTT
AAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGAAATGTGTTGGACTTGGAATGTCG
CGTGATGCAATTAGATTTGGCCGAATGCCCAGACATGAGAAGCAACAAATTATTCAAGAA
ATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGGGAAATGTACTTGGCTATCAAAAG
CTAATCACAGAAATATCGGAATCGTTTTTGCAACATATTTCACTCACGCAAGAGCGAGTA
AATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATAAAGCAAAAACATTACACACATTT
CATGACATTCCTGCGTGTTTCCCGAATTTGTCGACATATTATGCCCAGTTTAAATCATTT
ACCACGCAAGATGACGGGAAACCCATGGCTCCTGAAATGACTCTAAGTGACCATTTGAAA
AGCTTCTTAAATTCCACCAACCGAAATAAATCAAATGTTTCTAACAATGGCCAAAGCAAA
CCGGTTATGGAACCAGCACCAGACATCCAATCATCTGAACTTACCAGTTCAAGTCCCACT
GATCAGTTAAATTCAAGACCAAGCACTTCTTCAACCCCCAGCCTAAGCTCACAGCAACAT
AGTTTTGAACTAAAAGGAATTTTGGATTTTATCTCCATGCCTCCAAATAGTAGTTCACAG
CGAGATCCTTTCCACGGTACAATGCAAAATTCAACAGCCAATGGGTCTTTAAACAAGCCA
AGCAAATGCGACGACAAATTGGAAAAGGAACCCAGATTAAAAGAAACTCCAACTAATGCA
TCAACTGCCTTTCAAACTATGAAGAATTTAAGCAACATCAAAACTTTTCAATCTATGTAT
GAAACAATATGTTCCCCCTCTGGTGAGTCGTTCAAATTATTACTTGAACAAAATCCTGGG
TTTTTGGAAGGCATGGACCCGACCAAACTGGTTTCTCCATGTGATGAAATGCTCACTCCT
GATCTTAAAGCGAGACTCCTGTTTGCATCACAAGTTTTTAAAAAAAATATTGGAAAAGAT
AAGCCAACGATCTATAAAAATGTTATTGGAAGCAAAATAGTGCAGATTCTTTACAGTGAT
TTTCAAGCAAGGGTTGTCAATGGAATATGCGAGCTTACTGAGTTTGCCAAGCGCCTTCCA
AATTTCCATGATATATCTCTTCAAGATCAGGTAATTCTATTAAAGTATGGAAGCTATGAG
ACCATGTTTGTACTCTTCAGTCGATTAATTTATGGAGAAGGCATGATTTTACCCAAGTCC
AACATATACGTCACATTCAACTTTGTGTATCAACTTGGTGTTGCTGGAGACATAATGAAA
TCGAAATTCTTATTTGCCAAGAAGATGTTGGCACTAGAACTAACAGACGATGAAATGGCT
CTCTTTGTTGCTATGATTATTCTCTGTCCAGATCGACCCGAAATCAACGACCGCAAATTG
GTAGAGCGAATACAGGAAAAAGTTTTATTTGCATTGGAATATCAGCTCTCTATATCTCAC
CCTCACAAACCAAGGTTGTTCGCCCACTTACTTTTAAAGATGGCGGAACTCCGGGAGCTG
GTATCGAAGCATGTTGTCATGGTGCAGAAATTGGCGGACGCTAAGGATTTCGTCCCACCT
CTGCTTTGTGAGATCATGCAGGACATGAAATAACGATTTTTGCGCACGTATAACGTGGTT
TTGGCTACTCTATGCATATTAAAGCTCAAGCTGAGATTGTGGGGACAGCTTGTTCTAATG
TGATGGGTATTTATTATTTCCTTCATGCAACCAACATTGTACATGAGATTTTTTTTTAAT
TTCAAGAAAGAATTGTAATTAACAATGCTTTTCAAAGTTACATACATTTAACTCCCAATC
TAGTTTATATTTTTTGTAACGTGTTTCCAGTGTGTGTTGTAAAGTGGTGATGTATTGTGC
AACTTTTTTGTTCCTCCGGCGCAAGTGAATATTTGTTTTGAACCTGCCACTGTGATGTTA
ATTGTTTTGTAATTTATCTTTTATCGCATTGGTACTATGGGTGCTTTTTTTTGTGCTTTT
CCAGGTTAAGACAAGCTTTGTGTTCTAAGTTTTCGGTAAATTAGAGCTTGAAATTGAACA
AAGATTCCATTTATTGTATAAGCGATATTTCTGTACTCCGTGCAAAAAATGCCATGTTTT
ATAATTTATTGCTCTCAAGAAATCGAAAATATTTAAGCGACTTTGTCGATGCCGCTATCG
GTCGTGGATAAATAGGGTTGAATTTCCGAGAAAGTATAATGACGATTAAGTTAATGAAAA
TAAAAATAATTATTT
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[66-136] 2.6E-33 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[66-159] 4.1E-33 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[66-140] 17.525 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[68-135] 3.4E-26 |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[69-85] 1.3E-17 - T[85-100] 1.3E-17 - T[117-125] 1.3E-17 - T[125-133] 1.3E-17 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[69-95] . |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[129-139] 5.9E-20 - T[478-499] 5.9E-20 - T[499-515] 5.9E-20 - T[566-581] 5.9E-20 - T[623-640] 5.9E-20 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[461-660] 5.51E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[475-496] 3.0E-6 - T[501-520] 3.0E-6 - T[566-588] 3.0E-6 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[477-635] 3.9E-22 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[485-640] 2.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 51.515 % | 159 | 6.33E-42 |
| PPARD_HUMAN | 42.328 % | 162 | 7.59E-44 |
| PPARA_HUMAN | 69.149 % | 154 | 1.89E-40 |