- Transcript 'KH2012:KH.C8.143.v4....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v4.A.SL1-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,444 / 4,441,979]
Amino acid sequence
Length: 653
>KH.C8.143.v4.A.SL1-2
LLLHIYFVNMSEEKCDKVDADVSPDCVKTECPKVLAPLRKKRPSTKLLVKSTDLNILCKV
CGDKASGFHYGVHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNKCQFCRFKKCVGL
GMSRDAIRFGRMPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEISESFLQHISLTQ
ERVNACWESRKALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDDGKPMAPEMTLSD
HLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPSTSSTPSLSS
QQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLEKEPRLKETP
TNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPTKLVSPCDEM
LTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNGICELTEFAK
RLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNFVYQLGVAGD
IMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKVLFALEYQLS
ISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEIMQDMK
Nucleotide sequence
Length: 2,605
>KH2012:KH.C8.143.v4.A.SL1-2
TTTATTACTACATATCTATTTTGTTAATATGAGTGAGGAAAAATGTGATAAGGTTGACGC
CGATGTTTCTCCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTGCACCATTACGAAA
AAAGCGACCTTCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATATACTATGCAAAGT
TTGTGGAGATAAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTGAAGGGTGCAAGGG
ATTTTTTCGACGGACCATTCGACTCAAAATTGAATACGAAACTTGTGTGCAGTCATGCAA
AGTCGATCTTAAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGAAATGTGTTGGACT
TGGAATGTCGCGTGATGCAATTAGATTTGGCCGAATGCCCAGACATGAGAAGCAACAAAT
TATTCAAGAAATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGGGAAATGTACTTGG
CTATCAAAAGCTAATCACAGAAATATCGGAATCGTTTTTGCAACATATTTCACTCACGCA
AGAGCGAGTAAATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATAAAGCAAAAACATT
ACACACATTTCATGACATTCCTGCGTGTTTCCCGAATTTGTCGACATATTATGCCCAGTT
TAAATCATTTACCACGCAAGATGACGGGAAACCCATGGCTCCTGAAATGACTCTAAGTGA
CCATTTGAAAAGCTTCTTAAATTCCACCAACCGAAATAAATCAAATGTTTCTAACAATGG
CCAAAGCAAACCGGTTATGGAACCAGCACCAGACATCCAATCATCTGAACTTACCAGTTC
AAGTCCCACTGATCAGTTAAATTCAAGACCAAGCACTTCTTCAACCCCCAGCCTAAGCTC
ACAGCAACATAGTTTTGAACTAAAAGGAATTTTGGATTTTATCTCCATGCCTCCAAATAG
TAGTTCACAGCGAGATCCTTTCCACGGTACAATGCAAAATTCAACAGCCAATGGGTCTTT
AAACAAGCCAAGCAAATGCGACGACAAATTGGAAAAGGAACCCAGATTAAAAGAAACTCC
AACTAATGCATCAACTGCCTTTCAAACTATGAAGAATTTAAGCAACATCAAAACTTTTCA
ATCTATGTATGAAACAATATGTTCCCCCTCTGGTGAGTCGTTCAAATTATTACTTGAACA
AAATCCTGGGTTTTTGGAAGGCATGGACCCGACCAAACTGGTTTCTCCATGTGATGAAAT
GCTCACTCCTGATCTTAAAGCGAGACTCCTGTTTGCATCACAAGTTTTTAAAAAAAATAT
TGGAAAAGATAAGCCAACGATCTATAAAAATGTTATTGGAAGCAAAATAGTGCAGATTCT
TTACAGTGATTTTCAAGCAAGGGTTGTCAATGGAATATGCGAGCTTACTGAGTTTGCCAA
GCGCCTTCCAAATTTCCATGATATATCTCTTCAAGATCAGGTAATTCTATTAAAGTATGG
AAGCTATGAGACCATGTTTGTACTCTTCAGTCGATTAATTTATGGAGAAGGCATGATTTT
ACCCAAGTCCAACATATACGTCACATTCAACTTTGTGTATCAACTTGGTGTTGCTGGAGA
CATAATGAAATCGAAATTCTTATTTGCCAAGAAGATGTTGGCACTAGAACTAACAGACGA
TGAAATGGCTCTCTTTGTTGCTATGATTATTCTCTGTCCAGATCGACCCGAAATCAACGA
CCGCAAATTGGTAGAGCGAATACAGGAAAAAGTTTTATTTGCATTGGAATATCAGCTCTC
TATATCTCACCCTCACAAACCAAGGTTGTTCGCCCACTTACTTTTAAAGATGGCGGAACT
CCGGGAGCTGGTATCGAAGCATGTTGTCATGGTGCAGAAATTGGCGGACGCTAAGGATTT
CGTCCCACCTCTGCTTTGTGAGATCATGCAGGACATGAAATAACGATTTTTGCGCACGTA
TAACGTGGTTTTGGCTACTCTATGCATATTAAAGCTCAAGCTGAGATTGTGGGGACAGCT
TGTTCTAATGTGATGGGTATTTATTATTTCCTTCATGCAACCAACATTGTACATGAGATT
TTTTTTTAATTTCAAGAAAGAATTGTAATTAACAATGCTTTTCAAAGTTACATACATTTA
ACTCCCAATCTAGTTTATATTTTTTGTAACGTGTTTCCAGTGTGTGTTGTAAAGTGGTGA
TGTATTGTGCAACTTTTTTGTTCCTCCGGCGCAAGTGAATATTTGTTTTGAACCTGCCAC
TGTGATGTTAATTGTTTTGTAATTTATCTTTTATCGCATTGGTACTATGGGTGCTTTTTT
TTGTGCTTTTCCAGGTTAAGACAAGCTTTGTGTTCTAAGTTTTCGGTAAATTAGAGCTTG
AAATTGAACAAAGATTCCATTTATTGTATAAGCGATATTTCTGTACTCCGTGCAAAAAAT
GCCATGTTTTATAATTTATTGCTCTCAAGAAATCGAAAATATTTAAGCGACTTTGTCGAT
GCCGCTATCGGTCGTGGATAAATAGGGTTGAATTTCCGAGAAAGTATAATGACGATTAAG
TTAATGAAAATAAAAATAATTATTT
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[55-125] 2.6E-33 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[55-129] 17.525 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[55-148] 4.0E-33 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[57-124] 3.3E-26 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[58-84] . |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[58-74] 1.3E-17 - T[74-89] 1.3E-17 - T[106-114] 1.3E-17 - T[114-122] 1.3E-17 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[118-128] 5.5E-20 - T[467-488] 5.5E-20 - T[488-504] 5.5E-20 - T[555-570] 5.5E-20 - T[612-629] 5.5E-20 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[450-649] 7.08E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[464-485] 2.9E-6 - T[490-509] 2.9E-6 - T[555-577] 2.9E-6 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[466-624] 3.9E-22 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[474-629] 2.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 51.515 % | 159 | 6.36E-42 |
| PPARD_HUMAN | 42.328 % | 162 | 8.72E-44 |
| PPARA_HUMAN | 69.149 % | 153 | 2.24E-40 |