- Transcript 'KH2012:KH.C8.143.v4....' >
- Clone 'cien46138' >
- Transcript 'KH2012:KH.C8.143.v3....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v3.A.SL5-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,431 / 4,441,979]
Amino acid sequence
Length: 422
>KH.C8.143.v3.A.SL5-2
MAPEMTLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPS
TSSTPSLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLE
KEPRLKETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPT
KLVSPCDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNG
ICELTEFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNF
VYQLGVAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKV
LFALEYQLSISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEIMQD
MK
Nucleotide sequence
Length: 2,512
>KH2012:KH.C8.143.v3.A.SL5-2
CGGATATTATTAGTTTATTACTACATATCTATTTTGTTAATATGAGTGAGGAAAAATGTG
ATAAGGTTGACGCCGATGTTTCTCCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTG
CACCATTACGAAAAAAGCGACCTTCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATA
TACTATGCAAAGTTTGTGGAGATAAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTG
AAGGGTGCAAGGGATTTTTTCGACGGACCATTCGACTCAAAATTGAATACGAAACTTGTG
TGCAGTCATGCAAAGTCGATCTTAAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGA
AATGTGTTGGACTTGGAATGTCGCGTGATGCAATTAGATTTGGCCGAATGCCCAGACATG
AGAAGCAACAAATTATTCAAGAAATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGG
GAAATGTACTTGGCTATCAAAAGCTAATCACAGAAATATCGGAATCGTTTTTGCAACATA
TTTCACTCACGCAAGAGCGAGTAAATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATA
AATGGCTCCTGAAATGACTCTAAGTGACCATTTGAAAAGCTTCTTAAATTCCACCAACCG
AAATAAATCAAATGTTTCTAACAATGGCCAAAGCAAACCGGTTATGGAACCAGCACCAGA
CATCCAATCATCTGAACTTACCAGTTCAAGTCCCACTGATCAGTTAAATTCAAGACCAAG
CACTTCTTCAACCCCCAGCCTAAGCTCACAGCAACATAGTTTTGAACTAAAAGGAATTTT
GGATTTTATCTCCATGCCTCCAAATAGTAGTTCACAGCGAGATCCTTTCCACGGTACAAT
GCAAAATTCAACAGCCAATGGGTCTTTAAACAAGCCAAGCAAATGCGACGACAAATTGGA
AAAGGAACCCAGATTAAAAGAAACTCCAACTAATGCATCAACTGCCTTTCAAACTATGAA
GAATTTAAGCAACATCAAAACTTTTCAATCTATGTATGAAACAATATGTTCCCCCTCTGG
TGAGTCGTTCAAATTATTACTTGAACAAAATCCTGGGTTTTTGGAAGGCATGGACCCGAC
CAAACTGGTTTCTCCATGTGATGAAATGCTCACTCCTGATCTTAAAGCGAGACTCCTGTT
TGCATCACAAGTTTTTAAAAAAAATATTGGAAAAGATAAGCCAACGATCTATAAAAATGT
TATTGGAAGCAAAATAGTGCAGATTCTTTACAGTGATTTTCAAGCAAGGGTTGTCAATGG
AATATGCGAGCTTACTGAGTTTGCCAAGCGCCTTCCAAATTTCCATGATATATCTCTTCA
AGATCAGGTAATTCTATTAAAGTATGGAAGCTATGAGACCATGTTTGTACTCTTCAGTCG
ATTAATTTATGGAGAAGGCATGATTTTACCCAAGTCCAACATATACGTCACATTCAACTT
TGTGTATCAACTTGGTGTTGCTGGAGACATAATGAAATCGAAATTCTTATTTGCCAAGAA
GATGTTGGCACTAGAACTAACAGACGATGAAATGGCTCTCTTTGTTGCTATGATTATTCT
CTGTCCAGATCGACCCGAAATCAACGACCGCAAATTGGTAGAGCGAATACAGGAAAAAGT
TTTATTTGCATTGGAATATCAGCTCTCTATATCTCACCCTCACAAACCAAGGTTGTTCGC
CCACTTACTTTTAAAGATGGCGGAACTCCGGGAGCTGGTATCGAAGCATGTTGTCATGGT
GCAGAAATTGGCGGACGCTAAGGATTTCGTCCCACCTCTGCTTTGTGAGATCATGCAGGA
CATGAAATAACGATTTTTGCGCACGTATAACGTGGTTTTGGCTACTCTATGCATATTAAA
GCTCAAGCTGAGATTGTGGGGACAGCTTGTTCTAATGTGATGGGTATTTATTATTTCCTT
CATGCAACCAACATTGTACATGAGATTTTTTTTTAATTTCAAGAAAGAATTGTAATTAAC
AATGCTTTTCAAAGTTACATACATTTAACTCCCAATCTAGTTTATATTTTTTGTAACGTG
TTTCCAGTGTGTGTTGTAAAGTGGTGATGTATTGTGCAACTTTTTTGTTCCTCCGGCGCA
AGTGAATATTTGTTTTGAACCTGCCACTGTGATGTTAATTGTTTTGTAATTTATCTTTTA
TCGCATTGGTACTATGGGTGCTTTTTTTTGTGCTTTTCCAGGTTAAGACAAGCTTTGTGT
TCTAAGTTTTCGGTAAATTAGAGCTTGAAATTGAACAAAGATTCCATTTATTGTATAAGC
GATATTTCTGTACTCCGTGCAAAAAATGCCATGTTTTATAATTTATTGCTCTCAAGAAAT
CGAAAATATTTAAGCGACTTTGTCGATGCCGCTATCGGTCGTGGATAAATAGGGTTGAAT
TTCCGAGAAAGTATAATGACGATTAAGTTAATGAAAATAAAAATAATTATTT
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[219-418] 2.36E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[233-254] 9.1E-7 - T[259-278] 9.1E-7 - T[324-346] 9.1E-7 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[235-393] 3.9E-22 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[236-257] 1.6E-16 - T[257-273] 1.6E-16 - T[324-339] 1.6E-16 - T[381-398] 1.6E-16 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[243-398] 8.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 40.887 % | 143 | 6.5E-38 |
| PPARD_HUMAN | 42.211 % | 148 | 4.83E-40 |
| PPARA_HUMAN | 41.063 % | 144 | 1.86E-38 |