- Transcript 'KH2012:KH.C14.340.v1...' >
- Transcript 'KH2012:KH.C8.143.v3....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v3.A.SL1-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,433,444 / 4,441,979]
Amino acid sequence
Length: 422
>KH.C8.143.v3.A.SL1-2
MAPEMTLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNSRPS
TSSTPSLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDDKLE
KEPRLKETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGMDPT
KLVSPCDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARVVNG
ICELTEFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVTFNF
VYQLGVAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQEKV
LFALEYQLSISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEIMQD
MK
Nucleotide sequence
Length: 2,499
>KH2012:KH.C8.143.v3.A.SL1-2
TTTATTACTACATATCTATTTTGTTAATATGAGTGAGGAAAAATGTGATAAGGTTGACGC
CGATGTTTCTCCCGATTGTGTTAAAACCGAATGCCCCAAAGTGCTTGCACCATTACGAAA
AAAGCGACCTTCTACAAAGCTATTGGTGAAGTCAACGGATTTGAATATACTATGCAAAGT
TTGTGGAGATAAAGCGTCTGGATTTCACTATGGTGTCCATGCATGTGAAGGGTGCAAGGG
ATTTTTTCGACGGACCATTCGACTCAAAATTGAATACGAAACTTGTGTGCAGTCATGCAA
AGTCGATCTTAAAAGTCGGAACAAATGTCAATTCTGTCGATTTAAGAAATGTGTTGGACT
TGGAATGTCGCGTGATGCAATTAGATTTGGCCGAATGCCCAGACATGAGAAGCAACAAAT
TATTCAAGAAATAGAAAAAAAATCTAACAAGACTGGCTCCACCTCGGGAAATGTACTTGG
CTATCAAAAGCTAATCACAGAAATATCGGAATCGTTTTTGCAACATATTTCACTCACGCA
AGAGCGAGTAAATGCATGTTGGGAGTCGAGAAAAGCACTTGGAGATAAATGGCTCCTGAA
ATGACTCTAAGTGACCATTTGAAAAGCTTCTTAAATTCCACCAACCGAAATAAATCAAAT
GTTTCTAACAATGGCCAAAGCAAACCGGTTATGGAACCAGCACCAGACATCCAATCATCT
GAACTTACCAGTTCAAGTCCCACTGATCAGTTAAATTCAAGACCAAGCACTTCTTCAACC
CCCAGCCTAAGCTCACAGCAACATAGTTTTGAACTAAAAGGAATTTTGGATTTTATCTCC
ATGCCTCCAAATAGTAGTTCACAGCGAGATCCTTTCCACGGTACAATGCAAAATTCAACA
GCCAATGGGTCTTTAAACAAGCCAAGCAAATGCGACGACAAATTGGAAAAGGAACCCAGA
TTAAAAGAAACTCCAACTAATGCATCAACTGCCTTTCAAACTATGAAGAATTTAAGCAAC
ATCAAAACTTTTCAATCTATGTATGAAACAATATGTTCCCCCTCTGGTGAGTCGTTCAAA
TTATTACTTGAACAAAATCCTGGGTTTTTGGAAGGCATGGACCCGACCAAACTGGTTTCT
CCATGTGATGAAATGCTCACTCCTGATCTTAAAGCGAGACTCCTGTTTGCATCACAAGTT
TTTAAAAAAAATATTGGAAAAGATAAGCCAACGATCTATAAAAATGTTATTGGAAGCAAA
ATAGTGCAGATTCTTTACAGTGATTTTCAAGCAAGGGTTGTCAATGGAATATGCGAGCTT
ACTGAGTTTGCCAAGCGCCTTCCAAATTTCCATGATATATCTCTTCAAGATCAGGTAATT
CTATTAAAGTATGGAAGCTATGAGACCATGTTTGTACTCTTCAGTCGATTAATTTATGGA
GAAGGCATGATTTTACCCAAGTCCAACATATACGTCACATTCAACTTTGTGTATCAACTT
GGTGTTGCTGGAGACATAATGAAATCGAAATTCTTATTTGCCAAGAAGATGTTGGCACTA
GAACTAACAGACGATGAAATGGCTCTCTTTGTTGCTATGATTATTCTCTGTCCAGATCGA
CCCGAAATCAACGACCGCAAATTGGTAGAGCGAATACAGGAAAAAGTTTTATTTGCATTG
GAATATCAGCTCTCTATATCTCACCCTCACAAACCAAGGTTGTTCGCCCACTTACTTTTA
AAGATGGCGGAACTCCGGGAGCTGGTATCGAAGCATGTTGTCATGGTGCAGAAATTGGCG
GACGCTAAGGATTTCGTCCCACCTCTGCTTTGTGAGATCATGCAGGACATGAAATAACGA
TTTTTGCGCACGTATAACGTGGTTTTGGCTACTCTATGCATATTAAAGCTCAAGCTGAGA
TTGTGGGGACAGCTTGTTCTAATGTGATGGGTATTTATTATTTCCTTCATGCAACCAACA
TTGTACATGAGATTTTTTTTTAATTTCAAGAAAGAATTGTAATTAACAATGCTTTTCAAA
GTTACATACATTTAACTCCCAATCTAGTTTATATTTTTTGTAACGTGTTTCCAGTGTGTG
TTGTAAAGTGGTGATGTATTGTGCAACTTTTTTGTTCCTCCGGCGCAAGTGAATATTTGT
TTTGAACCTGCCACTGTGATGTTAATTGTTTTGTAATTTATCTTTTATCGCATTGGTACT
ATGGGTGCTTTTTTTTGTGCTTTTCCAGGTTAAGACAAGCTTTGTGTTCTAAGTTTTCGG
TAAATTAGAGCTTGAAATTGAACAAAGATTCCATTTATTGTATAAGCGATATTTCTGTAC
TCCGTGCAAAAAATGCCATGTTTTATAATTTATTGCTCTCAAGAAATCGAAAATATTTAA
GCGACTTTGTCGATGCCGCTATCGGTCGTGGATAAATAGGGTTGAATTTCCGAGAAAGTA
TAATGACGATTAAGTTAATGAAAATAAAAATAATTATTT
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[219-418] 2.36E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[233-254] 9.1E-7 - T[259-278] 9.1E-7 - T[324-346] 9.1E-7 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[235-393] 3.9E-22 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[236-257] 1.6E-16 - T[257-273] 1.6E-16 - T[324-339] 1.6E-16 - T[381-398] 1.6E-16 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[243-398] 8.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 40.887 % | 143 | 6.5E-38 |
| PPARD_HUMAN | 42.211 % | 148 | 4.83E-40 |
| PPARA_HUMAN | 41.063 % | 144 | 1.86E-38 |