- Transcript 'KH2012:KH.C8.143.v2....'
Transcript Model
Transcript Id
KH2012:KH.C8.143.v2.A.ND2-2
Possible name(s)
PPARA; PPARD; PPARG
Gene model
Location
KhC8 [4,421,573 / 4,441,979]
Amino acid sequence
Length: 605
>KH.C8.143.v2.A.ND2-2
VKSTDLNILCKVCGDKASGFHYGVHACEGCKGFFRRTIRLKIEYETCVQSCKVDLKSRNK
CQFCRFKKCVGLGMSRDAIRFGRMPRHEKQQIIQEIEKKSNKTGSTSGNVLGYQKLITEI
SESFLQHISLTQERVNACWESRKALGDKAKTLHTFHDIPACFPNLSTYYAQFKSFTTQDD
GKPMAPEMTLSDHLKSFLNSTNRNKSNVSNNGQSKPVMEPAPDIQSSELTSSSPTDQLNS
RPSTSSTPSLSSQQHSFELKGILDFISMPPNSSSQRDPFHGTMQNSTANGSLNKPSKCDD
KLEKEPRLKETPTNASTAFQTMKNLSNIKTFQSMYETICSPSGESFKLLLEQNPGFLEGM
DPTKLVSPCDEMLTPDLKARLLFASQVFKKNIGKDKPTIYKNVIGSKIVQILYSDFQARV
VNGICELTEFAKRLPNFHDISLQDQVILLKYGSYETMFVLFSRLIYGEGMILPKSNIYVT
FNFVYQLGVAGDIMKSKFLFAKKMLALELTDDEMALFVAMIILCPDRPEINDRKLVERIQ
EKVLFALEYQLSISHPHKPRLFAHLLLKMAELRELVSKHVVMVQKLADAKDFVPPLLCEI
MQDMK
Nucleotide sequence
Length: 2,648
>KH2012:KH.C8.143.v2.A.ND2-2
AGATGTATAGTATTGCACTTTTCAGAACAAAAAGTTATATGGTAAAAGGACAAGGTATAT
AAAAAGATGAGAAAACTTAGTTAGTAATGCTTGAGCAGTAAAAACGAAAGCTTCTGTACC
TGTTGTGTCTTCTTTCCAAGCCATAAGATCGAGTGACGGAATCGAATTACAGCTTACGAA
ACCTGTAGGTGAAGTCAACGGATTTGAATATACTATGCAAAGTTTGTGGAGATAAAGCGT
CTGGATTTCACTATGGTGTCCATGCATGTGAAGGGTGCAAGGGATTTTTTCGACGGACCA
TTCGACTCAAAATTGAATACGAAACTTGTGTGCAGTCATGCAAAGTCGATCTTAAAAGTC
GGAACAAATGTCAATTCTGTCGATTTAAGAAATGTGTTGGACTTGGAATGTCGCGTGATG
CAATTAGATTTGGCCGAATGCCCAGACATGAGAAGCAACAAATTATTCAAGAAATAGAAA
AAAAATCTAACAAGACTGGCTCCACCTCGGGAAATGTACTTGGCTATCAAAAGCTAATCA
CAGAAATATCGGAATCGTTTTTGCAACATATTTCACTCACGCAAGAGCGAGTAAATGCAT
GTTGGGAGTCGAGAAAAGCACTTGGAGATAAAGCAAAAACATTACACACATTTCATGACA
TTCCTGCGTGTTTCCCGAATTTGTCGACATATTATGCCCAGTTTAAATCATTTACCACGC
AAGATGACGGGAAACCCATGGCTCCTGAAATGACTCTAAGTGACCATTTGAAAAGCTTCT
TAAATTCCACCAACCGAAATAAATCAAATGTTTCTAACAATGGCCAAAGCAAACCGGTTA
TGGAACCAGCACCAGACATCCAATCATCTGAACTTACCAGTTCAAGTCCCACTGATCAGT
TAAATTCAAGACCAAGCACTTCTTCAACCCCCAGCCTAAGCTCACAGCAACATAGTTTTG
AACTAAAAGGAATTTTGGATTTTATCTCCATGCCTCCAAATAGTAGTTCACAGCGAGATC
CTTTCCACGGTACAATGCAAAATTCAACAGCCAATGGGTCTTTAAACAAGCCAAGCAAAT
GCGACGACAAATTGGAAAAGGAACCCAGATTAAAAGAAACTCCAACTAATGCATCAACTG
CCTTTCAAACTATGAAGAATTTAAGCAACATCAAAACTTTTCAATCTATGTATGAAACAA
TATGTTCCCCCTCTGGTGAGTCGTTCAAATTATTACTTGAACAAAATCCTGGGTTTTTGG
AAGGCATGGACCCGACCAAACTGGTTTCTCCATGTGATGAAATGCTCACTCCTGATCTTA
AAGCGAGACTCCTGTTTGCATCACAAGTTTTTAAAAAAAATATTGGAAAAGATAAGCCAA
CGATCTATAAAAATGTTATTGGAAGCAAAATAGTGCAGATTCTTTACAGTGATTTTCAAG
CAAGGGTTGTCAATGGAATATGCGAGCTTACTGAGTTTGCCAAGCGCCTTCCAAATTTCC
ATGATATATCTCTTCAAGATCAGGTAATTCTATTAAAGTATGGAAGCTATGAGACCATGT
TTGTACTCTTCAGTCGATTAATTTATGGAGAAGGCATGATTTTACCCAAGTCCAACATAT
ACGTCACATTCAACTTTGTGTATCAACTTGGTGTTGCTGGAGACATAATGAAATCGAAAT
TCTTATTTGCCAAGAAGATGTTGGCACTAGAACTAACAGACGATGAAATGGCTCTCTTTG
TTGCTATGATTATTCTCTGTCCAGATCGACCCGAAATCAACGACCGCAAATTGGTAGAGC
GAATACAGGAAAAAGTTTTATTTGCATTGGAATATCAGCTCTCTATATCTCACCCTCACA
AACCAAGGTTGTTCGCCCACTTACTTTTAAAGATGGCGGAACTCCGGGAGCTGGTATCGA
AGCATGTTGTCATGGTGCAGAAATTGGCGGACGCTAAGGATTTCGTCCCACCTCTGCTTT
GTGAGATCATGCAGGACATGAAATAACGATTTTTGCGCACGTATAACGTGGTTTTGGCTA
CTCTATGCATATTAAAGCTCAAGCTGAGATTGTGGGGACAGCTTGTTCTAATGTGATGGG
TATTTATTATTTCCTTCATGCAACCAACATTGTACATGAGATTTTTTTTTAATTTCAAGA
AAGAATTGTAATTAACAATGCTTTTCAAAGTTACATACATTTAACTCCCAATCTAGTTTA
TATTTTTTGTAACGTGTTTCCAGTGTGTGTTGTAAAGTGGTGATGTATTGTGCAACTTTT
TTGTTCCTCCGGCGCAAGTGAATATTTGTTTTGAACCTGCCACTGTGATGTTAATTGTTT
TGTAATTTATCTTTTATCGCATTGGTACTATGGGTGCTTTTTTTTGTGCTTTTCCAGGTT
AAGACAAGCTTTGTGTTCTAAGTTTTCGGTAAATTAGAGCTTGAAATTGAACAAAGATTC
CATTTATTGTATAAGCGATATTTCTGTACTCCGTGCAAAAAATGCCATGTTTTATAATTT
ATTGCTCTCAAGAAATCGAAAATATTTAAGCGACTTTGTCGATGCCGCTATCGGTCGTGG
ATAAATAGGGTTGAATTTCCGAGAAAGTATAATGACGATTAAGTTAATGAAAATAAAAAT
AATTATTT
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[7-81] 17.525 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[7-100] 3.5E-33 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[7-77] 2.6E-33 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[9-76] 3.0E-26 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[10-36] . |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[10-26] 9.5E-18 - T[26-41] 9.5E-18 - T[58-66] 9.5E-18 - T[66-74] 9.5E-18 |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[70-80] 3.9E-20 - T[419-440] 3.9E-20 - T[440-456] 3.9E-20 - T[507-522] 3.9E-20 - T[564-581] 3.9E-20 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[402-601] 6.03E-55 |
| PRINTS |
ThyrH_rcpt (IPR001728) - T[416-437] 2.4E-6 - T[442-461] 2.4E-6 - T[507-529] 2.4E-6 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[418-576] 3.9E-22 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[426-581] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PPARG_HUMAN | 51.515 % | 159 | 2.65E-42 |
| PPARD_HUMAN | 42.328 % | 162 | 3.73E-44 |
| PPARA_HUMAN | 69.149 % | 154 | 1.18E-40 |