- Transcript 'Mooccu.CG.ELv1_2.S50...' >
- Molecular Tool 'Bmp2/4-MO (Imai 2012)' >
- Transcript 'KH2012:KH.C13.126.v1...' >
- Transcript 'KH2012:KH.C7.90.v6.R...'
Transcript Model
Transcript Id
KH2012:KH.C7.90.v6.R.ND4-1
Possible name(s)
SH3RF2; SH3RF3; SORBS1
Gene model
Location
KhC7 [5,699,096 / 5,719,737]
Amino acid sequence
Length: 953
>KH.C7.90.v6.R.ND4-1
YTTPTPFSLVGKSKFKPIRFGQVNRKTSLDNGFSNKNGKKVDEPEISGDKNANVNGRVKS
FPLLKTQKKNENIKEEILNIILNDENNKTTHIIPKEQEKEGVEKDQTLAKVLNNVETSEK
CETLDLIQNVEDGHGKDGEAPSKILNVENENENKNEMTGSLPKDEQGNGKERFLDQIQTN
VGEIPKNEPGNSEVEFPGLIQNEEESIENGKIQESIPKHEIESNELGGSTDMVAKNEQCD
KEKEFLTETGSRGSSETSCPYSSMSGVYEVEEEERPYTDDDIDDIETIYKAPQRHHVVKS
TMSNETLFLDGLVESSSEVFETNENNRCIDNVAEGSLKPTDDDFILPPLPPPPSDAFLNA
QQPRTNYSKVTFNPAQKGKVENSTKVTIHGTPFPTPPGASVEVTPQHNLPGGAVYQTTTK
EGDLYHTDTYYPASNPGDPQAVVLERTKTTTLVKAPHHEGIGPTTGTGVPVALKSSVDDS
KHWYKSMFKQMHKIDGNEADTPETNGSSSRPMSADSSNGRHHVSMETERPTRVGKITDYK
PAEPYVVENKPQMETTVQTSSTSYTPPHSKMSGYHSNVTKQPITTQHKKESTTDAVKRNV
NQQQRKSQGDGIRQPAKAKFDFNSRTGKELSVKRGQTVIITRRVDDNWYMTETPDGVKSG
IIPVEYLKVITSSSQPDKPTRHGQAKAKFDFNGKTKNELSFKKGDDLVLLKRVDDNWYKG
KLGPNTGILPVGYVQVTLEPETKQTKKETIPKQLEVSPRSSHSQQSSTISQTSLDSSEPD
ETEKKNRAAFLAHSVVGHTPALASNHRHRGEFDLTELDQVIDQSTATVAQPKPTNIEVHY
DYPKPIKPQSPKPPPTQQTLPLPTVPSYPSSTSSQPSSPRAISPPAPDIDYGQIIGRYVA
LYAYESSNEDELDLRPGDVVIVVEICDDGWYVGTSERTGGFGTFPGNYVTAAQ
Nucleotide sequence
Length: 3,543
>KH2012:KH.C7.90.v6.R.ND4-1
ACTACACAACCCCCACTCCGTTCTCATTGGTTGGAAAAAGCAAGTTTAAACCAATCAGAT
TCGGGCAGGTAAATCGGAAAACCTCATTGGACAACGGATTTTCAAATAAAAATGGCAAGA
AAGTTGATGAACCAGAGATTTCTGGCGATAAAAATGCTAATGTGAATGGTCGTGTAAAAA
GTTTCCCACTTTTAAAAACTCAAAAGAAAAATGAAAATATAAAAGAAGAAATCTTAAACA
TTATACTAAACGACGAAAATAATAAAACTACCCACATAATACCAAAAGAACAAGAAAAAG
AAGGTGTTGAAAAAGACCAAACCTTAGCCAAAGTACTAAACAATGTGGAAACTAGTGAAA
AGTGTGAAACTTTAGATTTGATACAAAATGTTGAAGACGGTCACGGAAAAGACGGTGAAG
CACCAAGCAAAATACTTAATGTTGAAAATGAAAATGAAAATAAAAATGAAATGACAGGGT
CACTGCCAAAAGATGAACAAGGAAATGGAAAAGAGCGATTCCTGGACCAAATACAAACGA
ATGTAGGTGAAATACCAAAAAATGAACCAGGGAATAGTGAGGTAGAATTCCCAGGTTTGA
TACAAAATGAAGAAGAAAGTATTGAAAATGGGAAAATCCAAGAATCAATACCAAAACATG
AAATAGAAAGCAATGAATTGGGAGGATCTACAGACATGGTGGCTAAGAATGAACAATGTG
ATAAAGAAAAGGAGTTTTTGACGGAGACAGGTTCACGTGGAAGTTCTGAAACTTCGTGCC
CGTATTCCTCCATGTCAGGAGTTTATGAGGTTGAGGAAGAAGAACGTCCGTATACAGATG
ATGATATTGACGACATAGAAACAATATATAAGGCTCCACAGAGACACCATGTGGTGAAAA
GCACGATGAGCAACGAAACGTTGTTTCTCGACGGTTTGGTGGAAAGTTCGTCGGAAGTTT
TTGAAACAAATGAAAATAATCGGTGTATTGATAATGTAGCTGAAGGGAGTTTGAAACCAA
CTGATGATGATTTTATTCTTCCACCCCTTCCACCTCCACCATCGGATGCCTTCCTTAATG
CACAGCAGCCTCGAACCAATTATTCCAAAGTGACTTTCAATCCTGCCCAGAAAGGGAAAG
TTGAGAATTCCACGAAAGTAACGATCCATGGAACCCCCTTCCCTACCCCACCCGGTGCCT
CAGTGGAGGTTACCCCGCAACACAACTTACCTGGTGGAGCAGTTTACCAAACGACAACCA
AAGAAGGCGACCTGTACCACACGGACACCTACTACCCCGCTTCTAACCCCGGTGACCCCC
AAGCTGTCGTACTTGAGCGCACAAAGACGACCACCCTTGTTAAAGCACCCCACCATGAGG
GTATTGGGCCAACTACCGGGACAGGGGTGCCAGTCGCGTTGAAATCGTCAGTTGATGATT
CAAAGCATTGGTATAAGAGCATGTTCAAACAAATGCATAAGATTGATGGGAATGAAGCAG
ACACACCAGAAACAAATGGCTCAAGTTCAAGGCCTATGTCAGCAGATAGCAGCAACGGTC
GACACCACGTATCCATGGAGACGGAACGACCAACCAGGGTGGGAAAGATAACGGATTACA
AACCCGCTGAACCATACGTGGTTGAGAATAAACCGCAAATGGAAACAACTGTGCAAACTT
CATCTACAAGTTACACCCCGCCTCATTCGAAAATGTCGGGTTACCATAGCAACGTTACTA
AACAACCAATTACAACGCAGCATAAGAAAGAATCTACCACGGATGCAGTGAAGCGTAACG
TGAACCAACAACAACGAAAATCACAAGGTGATGGGATTCGACAACCAGCAAAAGCAAAGT
TTGATTTTAATTCAAGAACTGGAAAGGAGTTGTCGGTCAAGCGAGGACAAACGGTGATTA
TCACACGTCGTGTGGACGATAATTGGTACATGACGGAGACACCGGATGGCGTAAAGAGCG
GAATTATCCCCGTGGAGTATTTGAAGGTGATCACATCATCCAGCCAACCTGACAAACCCA
CCCGGCACGGACAAGCCAAAGCAAAGTTCGATTTCAACGGGAAAACTAAAAATGAACTTT
CCTTCAAGAAAGGAGATGATTTGGTTTTGTTGAAGCGTGTGGATGATAATTGGTACAAAG
GCAAGCTTGGTCCAAACACCGGTATTCTCCCTGTAGGTTACGTGCAAGTAACGTTGGAAC
CTGAAACTAAACAAACCAAGAAAGAAACGATTCCTAAACAACTTGAGGTTTCGCCGAGAT
CATCCCATTCACAACAGTCGTCAACTATTAGCCAGACTAGTTTGGACAGCAGTGAACCAG
ATGAAACTGAGAAAAAGAATCGGGCTGCTTTTCTCGCTCACTCCGTTGTCGGCCACACGC
CGGCACTAGCGAGCAACCACCGTCACCGGGGGGAGTTCGACCTCACAGAGCTCGACCAAG
TTATCGACCAATCAACCGCGACAGTCGCTCAGCCGAAACCAACCAACATAGAGGTCCATT
ACGATTACCCAAAACCCATAAAACCCCAGTCCCCTAAACCACCCCCAACCCAGCAAACCT
TACCCCTACCTACCGTACCATCTTACCCCTCTTCTACAAGCTCCCAGCCCTCCAGCCCGC
GTGCCATCTCGCCCCCAGCGCCCGACATCGATTACGGCCAAATTATCGGTCGTTACGTAG
CTTTGTACGCTTACGAATCGAGCAACGAGGACGAACTTGACCTCCGCCCTGGTGACGTCG
TTATCGTGGTCGAAATTTGTGACGACGGCTGGTACGTGGGGACTTCGGAGCGGACCGGGG
GGTTCGGGACTTTCCCCGGAAATTACGTCACTGCTGCGCAATAATGGAAGAAAGCAGTGT
TGCCGAGTAAAACTGCTGCTCTAGTGTTGCCAGCTAAAAACTGCTTCCAGTGTTTCCGAG
TTGTTTTTATCAATCCAGTGTTGACCAATTGACGGGAATTTTCAGAACTTTTGTGACGTA
ATTATGTTGCTTGTGACGTATGAATAGAGGGAGGCGAATCAAAATCTAATTAACAATGAC
GTTTTTTGTGACGTCATTATGATTTTAACAATGCTTTTATCACGCAGCCTTTATTACGTC
ACAAACATTCACCATGCACGTCACAATGTGTAAATTTGCCACTGTAGGTCGCTGTGGAGC
TATCACCTGATTGGTTGAAATAATTTTTTTTCGAAAAAACATAATTTTCTTCCTTCCCAT
ACCCGATACATTATCCGCTTGATAATCGCGCTTATTAATCCACAATCGCTACAACAATTC
ACCTTGTTGCACTAGAATTATGGTTCAAATATGAATTTTATGCTTGTTGTTTATAATAAA
GGTGTTTATTACGTAATAATCATGTTTTAATATGACGTCATAGGCAACATTATAACATCA
CAATTAACATTCTGCTTTTCTTCTGTTACGTCATTTAGCGCATTGTTAACAATAATCATT
GATTGATATTTATTATTGTGACGTCAGAATCTAATTTTGTTTCAAGATTTGGTGAATACA
GCT
| PANTHER |
Sorbin_SH3 (IPR028506) - T[393-517] 2.0E-72 - T[571-950] 2.0E-72 |
| ProSiteProfiles |
SoHo_dom (IPR003127) - T[452-516] 15.74 |
| SMART |
SoHo_dom (IPR003127) - T[453-501] 1.8E-10 |
| Pfam |
SoHo_dom (IPR003127) - T[454-496] 3.5E-14 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[611-672] 12.664 - T[680-739] 13.941 - T[893-953] 15.513 |
| SMART |
SH3_domain (IPR001452) - T[614-671] 1.7E-11 - T[683-738] 7.3E-15 - T[896-953] 2.3E-19 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[615-676] 7.74E-13 - T[683-740] 5.51E-16 - T[865-951] 1.71E-19 |
| Pfam |
SH3_domain (IPR001452) - T[617-664] 8.1E-9 - T[686-730] 5.0E-11 - T[900-950] 1.7E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SH3R3_HUMAN | 29.261 % | 129 | 1.4E-30 |
| SRBS1_HUMAN | 40.645 % | 116 | 2.24E-26 |
| SH3R2_HUMAN | 28.775 % | 114 | 7.38E-26 |