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- Molecular Tool 'DMRT1-MO (Imai's 25mer MO)' >
- Transcript 'KH2012:KH.C7.90.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.C7.90.v5.A.SL2-1
Possible name(s)
SH3RF2; SH3RF3; SORBS1
Gene model
Location
KhC7 [5,713,055 / 5,719,737]
Amino acid sequence
Length: 451
>KH.C7.90.v5.A.SL2-1
SMFEVQSYRYAVRRSSSLEDFSQQDWQEYFDDILKPKSPSKIWDMDVKKQMETTVQTSST
SYTPPHSKMSGYHSNVTKQPITTQHKKESTTDAVKRNVNQQQRKSQGDGIRQPAKAKFDF
NSRTGKELSVKRGQTVIITRRVDDNWYMTETPDGVKSGIIPVEYLKVITSSSQPDKPTRH
GQAKAKFDFNGKTKNELSFKKGDDLVLLKRVDDNWYKGKLGPNTGILPVGYVQVTLEPET
KQTKKETIPKQLEVSPRSSHSQQSSTISQTSLDSSEPDETEKKNRAAFLAHSVVGHTPAL
ASNHRHRGEFDLTELDQVIDQSTATVAQPKPTNIEVHYDYPKPIKPQSPKPPPTQQTLPL
PTVPSYPSSTSSQPSSPRAISPPAPDIDYGQIIGRYVALYAYESSNEDELDLRPGDVVIV
VEICDDGWYVGTSERTGGFGTFPGNYVTAAQ
Nucleotide sequence
Length: 2,091
>KH2012:KH.C7.90.v5.A.SL2-1
GTTTCAAAAGTTTGTGTTTGTTTAAGTTTGCCGTGTCCATGTTAACATTGAAGTGAAGCA
TGTTTGAAGTTCAGAGTTACAGATATGCCGTGCGTCGCAGCTCGAGTCTGGAGGATTTTT
CCCAGCAAGATTGGCAAGAATATTTTGACGATATTCTTAAACCGAAATCGCCAAGTAAAA
TATGGGACATGGATGTGAAGAAGCAAATGGAAACAACTGTGCAAACTTCATCTACAAGTT
ACACCCCGCCTCATTCGAAAATGTCGGGTTACCATAGCAACGTTACTAAACAACCAATTA
CAACGCAGCATAAGAAAGAATCTACCACGGATGCAGTGAAGCGTAACGTGAACCAACAAC
AACGAAAATCACAAGGTGATGGGATTCGACAACCAGCAAAAGCAAAGTTTGATTTTAATT
CAAGAACTGGAAAGGAGTTGTCGGTCAAGCGAGGACAAACGGTGATTATCACACGTCGTG
TGGACGATAATTGGTACATGACGGAGACACCGGATGGCGTAAAGAGCGGAATTATCCCCG
TGGAGTATTTGAAGGTGATCACATCATCCAGCCAACCTGACAAACCCACCCGGCACGGAC
AAGCCAAAGCAAAGTTCGATTTCAACGGGAAAACTAAAAATGAACTTTCCTTCAAGAAAG
GAGATGATTTGGTTTTGTTGAAGCGTGTGGATGATAATTGGTACAAAGGCAAGCTTGGTC
CAAACACCGGTATTCTCCCTGTAGGTTACGTGCAAGTAACGTTGGAACCTGAAACTAAAC
AAACCAAGAAAGAAACGATTCCTAAACAACTTGAGGTTTCGCCGAGATCATCCCATTCAC
AACAGTCGTCAACTATTAGCCAGACTAGTTTGGACAGCAGTGAACCAGATGAAACTGAGA
AAAAGAATCGGGCTGCTTTTCTCGCTCACTCCGTTGTCGGCCACACGCCGGCACTAGCGA
GCAACCACCGTCACCGGGGGGAGTTCGACCTCACAGAGCTCGACCAAGTTATCGACCAAT
CAACCGCGACAGTCGCTCAGCCGAAACCAACCAACATAGAGGTCCATTACGATTACCCAA
AACCCATAAAACCCCAGTCCCCTAAACCACCCCCAACCCAGCAAACCTTACCCCTACCTA
CCGTACCATCTTACCCCTCTTCTACAAGCTCCCAGCCCTCCAGCCCGCGTGCCATCTCGC
CCCCAGCGCCCGACATCGATTACGGCCAAATTATCGGTCGTTACGTAGCTTTGTACGCTT
ACGAATCGAGCAACGAGGACGAACTTGACCTCCGCCCTGGTGACGTCGTTATCGTGGTCG
AAATTTGTGACGACGGCTGGTACGTGGGGACTTCGGAGCGGACCGGGGGGTTCGGGACTT
TCCCCGGAAATTACGTCACTGCTGCGCAATAATGGAAGAAAGCAGTGTTGCCGAGTAAAA
CTGCTGCTCTAGTGTTGCCAGCTAAAAACTGCTTCCAGTGTTTCCGAGTTGTTTTTATCA
ATCCAGTGTTGACCAATTGACGGGAATTTTCAGAACTTTTGTGACGTAATTATGTTGCTT
GTGACGTATGAATAGAGGGAGGCGAATCAAAATCTAATTAACAATGACGTTTTTTGTGAC
GTCATTATGATTTTAACAATGCTTTTATCACGCAGCCTTTATTACGTCACAAACATTCAC
CATGCACGTCACAATGTGTAAATTTGCCACTGTAGGTCGCTGTGGAGCTATCACCTGATT
GGTTGAAATAATTTTTTTTCGAAAAAACATAATTTTCTTCCTTCCCATACCCGATACATT
ATCCGCTTGATAATCGCGCTTATTAATCCACAATCGCTACAACAATTCACCTTGTTGCAC
TAGAATTATGGTTCAAATATGAATTTTATGCTTGTTGTTTATAATAAAGGTGTTTATTAC
GTAATAATCATGTTTTAATATGACGTCATAGGCAACATTATAACATCACAATTAACATTC
TGCTTTTCTTCTGTTACGTCATTTAGCGCATTGTTAACAATAATCATTGATTGATATTTA
TTATTGTGACGTCAGAATCTAATTTTGTTTCAAGATTTGGTGAATACAGCT
| PANTHER |
Sorbin_SH3 (IPR028506) - T[14-448] 9.1E-63 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[109-170] 12.664 - T[178-237] 13.941 - T[391-451] 15.513 |
| PRINTS |
SH3_domain (IPR001452) - T[112-122] 8.7E-7 - T[195-210] 8.7E-7 - T[425-434] 8.7E-7 - T[438-450] 8.7E-7 |
| SMART |
SH3_domain (IPR001452) - T[112-169] 1.7E-11 - T[181-236] 7.3E-15 - T[394-451] 2.3E-19 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[113-175] 2.76E-13 - T[181-262] 1.29E-16 - T[363-449] 1.1E-19 |
| Pfam |
SH3_domain (IPR001452) - T[115-162] 3.1E-9 - T[184-228] 2.0E-11 - T[398-448] 6.4E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SH3R3_HUMAN | 29.805 % | 128 | 1.32E-31 |
| SRBS1_HUMAN | 40.645 % | 115 | 1.8E-27 |
| SH3R2_HUMAN | 28.775 % | 115 | 1.12E-27 |