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- Transcript 'Phmamm.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C7.90.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C7.90.v4.A.SL5-1
Possible name(s)
SH3RF2; SH3RF3; SORBS1
Gene model
Location
KhC7 [5,696,246 / 5,719,737]
Amino acid sequence
Length: 1,026
>KH.C7.90.v4.A.SL5-1
PIGGSGDVIGAGVTRSQTDVIPTADDMHHHINHVTKPRRPIGTFEQRREKELDDILANLN
FTVAKMEEESAHDYTTPTPFSLVGKSKFKPIRFGQVNRKTSLDNGFSNKNGKKVDEPEIS
GDKNANVNGRVKSFPLLKTQKKNENIKEEILNIILNDENNKTTHIIPKEQEKEGVEKDQT
LAKVLNNVETSEKCETLDLIQNVEDGHGKDGEAPSKILNVENENENKNEMTGSLPKDEQG
NGKERFLDQIQTNVGEIPKNEPGNSEVEFPGLIQNEEESIENGKIQESIPKHEIESNELG
GSTDMVAKNEQCDKEKEFLTETGSRGSSETSCPYSSMSGVYEVEEEERPYTDDDIDDIET
IYKAPQRHHVVKSTMSNETLFLDGLVESSSEVFETNENNRCIDNVAEGSLKPTDDDFILP
PLPPPPSDAFLNAQQPRTNYSKVTFNPAQKGKVENSTKVTIHGTPFPTPPGASVEVTPQH
NLPGGAVYQTTTKEGDLYHTDTYYPASNPGDPQAVVLERTKTTTLVKAPHHEGIGPTTGT
GVPVALKSSVDDSKHWYKSMFKQMHKIDGNEADTPETNGSSSRPMSADSSNGRHHVSMET
ERPTRVGKITDYKPAEPYVVENKPQMETTVQTSSTSYTPPHSKMSGYHSNVTKQPITTQH
KKESTTDAVKRNVNQQQRKSQGDGIRQPAKAKFDFNSRTGKELSVKRGQTVIITRRVDDN
WYMTETPDGVKSGIIPVEYLKVITSSSQPDKPTRHGQAKAKFDFNGKTKNELSFKKGDDL
VLLKRVDDNWYKGKLGPNTGILPVGYVQVTLEPETKQTKKETIPKQLEVSPRSSHSQQSS
TISQTSLDSSEPDETEKKNRAAFLAHSVVGHTPALASNHRHRGEFDLTELDQVIDQSTAT
VAQPKPTNIEVHYDYPKPIKPQSPKPPPTQQTLPLPTVPSYPSSTSSQPSSPRAISPPAP
DIDYGQIIGRYVALYAYESSNEDELDLRPGDVVIVVEICDDGWYVGTSERTGGFGTFPGN
YVTAAQ
Nucleotide sequence
Length: 3,864
>KH2012:KH.C7.90.v4.A.SL5-1
CTTTTAGAAATTGACGTGAATATTCTTTTGGTGGCGTATGCAGCAGAGTTTTGTGAGAAA
TTTGAAAAATAAGTTCCGTCGGTGCTAACGAAATATAGACTTAGCCAATTGGTGGTAGCG
GTGACGTCATCGGTGCTGGGGTTACTAGAAGTCAAACTGACGTCATTCCAACTGCAGACG
ATATGCATCACCATATCAATCACGTGACTAAACCTCGACGTCCTATTGGTACGTTTGAAC
AGAGGCGGGAAAAGGAATTGGACGACATTCTTGCAAATTTAAACTTTACTGTGGCAAAGA
TGGAAGAAGAATCAGCACACGACTACACAACCCCCACTCCGTTCTCATTGGTTGGAAAAA
GCAAGTTTAAACCAATCAGATTCGGGCAGGTAAATCGGAAAACCTCATTGGACAACGGAT
TTTCAAATAAAAATGGCAAGAAAGTTGATGAACCAGAGATTTCTGGCGATAAAAATGCTA
ATGTGAATGGTCGTGTAAAAAGTTTCCCACTTTTAAAAACTCAAAAGAAAAATGAAAATA
TAAAAGAAGAAATCTTAAACATTATACTAAACGACGAAAATAATAAAACTACCCACATAA
TACCAAAAGAACAAGAAAAAGAAGGTGTTGAAAAAGACCAAACCTTAGCCAAAGTACTAA
ACAATGTGGAAACTAGTGAAAAGTGTGAAACTTTAGATTTGATACAAAATGTTGAAGACG
GTCACGGAAAAGACGGTGAAGCACCAAGCAAAATACTTAATGTTGAAAATGAAAATGAAA
ATAAAAATGAAATGACAGGGTCACTGCCAAAAGATGAACAAGGAAATGGAAAAGAGCGAT
TCCTGGACCAAATACAAACGAATGTAGGTGAAATACCAAAAAATGAACCAGGGAATAGTG
AGGTAGAATTCCCAGGTTTGATACAAAATGAAGAAGAAAGTATTGAAAATGGGAAAATCC
AAGAATCAATACCAAAACATGAAATAGAAAGCAATGAATTGGGAGGATCTACAGACATGG
TGGCTAAGAATGAACAATGTGATAAAGAAAAGGAGTTTTTGACGGAGACAGGTTCACGTG
GAAGTTCTGAAACTTCGTGCCCGTATTCCTCCATGTCAGGAGTTTATGAGGTTGAGGAAG
AAGAACGTCCGTATACAGATGATGATATTGACGACATAGAAACAATATATAAGGCTCCAC
AGAGACACCATGTGGTGAAAAGCACGATGAGCAACGAAACGTTGTTTCTCGACGGTTTGG
TGGAAAGTTCGTCGGAAGTTTTTGAAACAAATGAAAATAATCGGTGTATTGATAATGTAG
CTGAAGGGAGTTTGAAACCAACTGATGATGATTTTATTCTTCCACCCCTTCCACCTCCAC
CATCGGATGCCTTCCTTAATGCACAGCAGCCTCGAACCAATTATTCCAAAGTGACTTTCA
ATCCTGCCCAGAAAGGGAAAGTTGAGAATTCCACGAAAGTAACGATCCATGGAACCCCCT
TCCCTACCCCACCCGGTGCCTCAGTGGAGGTTACCCCGCAACACAACTTACCTGGTGGAG
CAGTTTACCAAACGACAACCAAAGAAGGCGACCTGTACCACACGGACACCTACTACCCCG
CTTCTAACCCCGGTGACCCCCAAGCTGTCGTACTTGAGCGCACAAAGACGACCACCCTTG
TTAAAGCACCCCACCATGAGGGTATTGGGCCAACTACCGGGACAGGGGTGCCAGTCGCGT
TGAAATCGTCAGTTGATGATTCAAAGCATTGGTATAAGAGCATGTTCAAACAAATGCATA
AGATTGATGGGAATGAAGCAGACACACCAGAAACAAATGGCTCAAGTTCAAGGCCTATGT
CAGCAGATAGCAGCAACGGTCGACACCACGTATCCATGGAGACGGAACGACCAACCAGGG
TGGGAAAGATAACGGATTACAAACCCGCTGAACCATACGTGGTTGAGAATAAACCGCAAA
TGGAAACAACTGTGCAAACTTCATCTACAAGTTACACCCCGCCTCATTCGAAAATGTCGG
GTTACCATAGCAACGTTACTAAACAACCAATTACAACGCAGCATAAGAAAGAATCTACCA
CGGATGCAGTGAAGCGTAACGTGAACCAACAACAACGAAAATCACAAGGTGATGGGATTC
GACAACCAGCAAAAGCAAAGTTTGATTTTAATTCAAGAACTGGAAAGGAGTTGTCGGTCA
AGCGAGGACAAACGGTGATTATCACACGTCGTGTGGACGATAATTGGTACATGACGGAGA
CACCGGATGGCGTAAAGAGCGGAATTATCCCCGTGGAGTATTTGAAGGTGATCACATCAT
CCAGCCAACCTGACAAACCCACCCGGCACGGACAAGCCAAAGCAAAGTTCGATTTCAACG
GGAAAACTAAAAATGAACTTTCCTTCAAGAAAGGAGATGATTTGGTTTTGTTGAAGCGTG
TGGATGATAATTGGTACAAAGGCAAGCTTGGTCCAAACACCGGTATTCTCCCTGTAGGTT
ACGTGCAAGTAACGTTGGAACCTGAAACTAAACAAACCAAGAAAGAAACGATTCCTAAAC
AACTTGAGGTTTCGCCGAGATCATCCCATTCACAACAGTCGTCAACTATTAGCCAGACTA
GTTTGGACAGCAGTGAACCAGATGAAACTGAGAAAAAGAATCGGGCTGCTTTTCTCGCTC
ACTCCGTTGTCGGCCACACGCCGGCACTAGCGAGCAACCACCGTCACCGGGGGGAGTTCG
ACCTCACAGAGCTCGACCAAGTTATCGACCAATCAACCGCGACAGTCGCTCAGCCGAAAC
CAACCAACATAGAGGTCCATTACGATTACCCAAAACCCATAAAACCCCAGTCCCCTAAAC
CACCCCCAACCCAGCAAACCTTACCCCTACCTACCGTACCATCTTACCCCTCTTCTACAA
GCTCCCAGCCCTCCAGCCCGCGTGCCATCTCGCCCCCAGCGCCCGACATCGATTACGGCC
AAATTATCGGTCGTTACGTAGCTTTGTACGCTTACGAATCGAGCAACGAGGACGAACTTG
ACCTCCGCCCTGGTGACGTCGTTATCGTGGTCGAAATTTGTGACGACGGCTGGTACGTGG
GGACTTCGGAGCGGACCGGGGGGTTCGGGACTTTCCCCGGAAATTACGTCACTGCTGCGC
AATAATGGAAGAAAGCAGTGTTGCCGAGTAAAACTGCTGCTCTAGTGTTGCCAGCTAAAA
ACTGCTTCCAGTGTTTCCGAGTTGTTTTTATCAATCCAGTGTTGACCAATTGACGGGAAT
TTTCAGAACTTTTGTGACGTAATTATGTTGCTTGTGACGTATGAATAGAGGGAGGCGAAT
CAAAATCTAATTAACAATGACGTTTTTTGTGACGTCATTATGATTTTAACAATGCTTTTA
TCACGCAGCCTTTATTACGTCACAAACATTCACCATGCACGTCACAATGTGTAAATTTGC
CACTGTAGGTCGCTGTGGAGCTATCACCTGATTGGTTGAAATAATTTTTTTTCGAAAAAA
CATAATTTTCTTCCTTCCCATACCCGATACATTATCCGCTTGATAATCGCGCTTATTAAT
CCACAATCGCTACAACAATTCACCTTGTTGCACTAGAATTATGGTTCAAATATGAATTTT
ATGCTTGTTGTTTATAATAAAGGTGTTTATTACGTAATAATCATGTTTTAATATGACGTC
ATAGGCAACATTATAACATCACAATTAACATTCTGCTTTTCTTCTGTTACGTCATTTAGC
GCATTGTTAACAATAATCATTGATTGATATTTATTATTGTGACGTCAGAATCTAATTTTG
TTTCAAGATTTGGTGAATACAGCT
| PANTHER |
Sorbin_SH3 (IPR028506) - T[466-590] 2.5E-72 - T[644-1023] 2.5E-72 |
| ProSiteProfiles |
SoHo_dom (IPR003127) - T[525-589] 15.74 |
| SMART |
SoHo_dom (IPR003127) - T[526-574] 1.8E-10 |
| Pfam |
SoHo_dom (IPR003127) - T[527-569] 3.8E-14 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[684-745] 12.664 - T[753-812] 13.941 - T[966-1026] 15.513 |
| SMART |
SH3_domain (IPR001452) - T[687-744] 1.7E-11 - T[756-811] 7.3E-15 - T[969-1026] 2.3E-19 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[688-749] 8.53E-13 - T[757-837] 5.64E-16 - T[938-1024] 1.97E-19 |
| Pfam |
SH3_domain (IPR001452) - T[690-737] 8.9E-9 - T[759-803] 5.5E-11 - T[973-1023] 1.8E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SH3R3_HUMAN | 29.261 % | 129 | 2.35E-30 |
| SRBS1_HUMAN | 40.645 % | 116 | 2.95E-26 |
| SH3R2_HUMAN | 28.775 % | 114 | 9.33E-26 |