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  1. Transcript 'KH2012:KH.C7.90.v1.R...'

Transcript Model

Transcript Id

KH2012:KH.C7.90.v1.R.ND1-1

Possible name(s)

SH3RF2; SH3RF3; SORBS1

Location

KhC7 [5,710,983 / 5,719,737]

Sequences

Amino acid sequence

Length: 452

>KH.C7.90.v1.R.ND1-1
AYRSLKKCSFVIKRRSSSLEDFSQQDWQEYFDDILKPKSPSKIWDMDVKKQMETTVQTSS
TSYTPPHSKMSGYHSNVTKQPITTQHKKESTTDAVKRNVNQQQRKSQGDGIRQPAKAKFD
FNSRTGKELSVKRGQTVIITRRVDDNWYMTETPDGVKSGIIPVEYLKVITSSSQPDKPTR
HGQAKAKFDFNGKTKNELSFKKGDDLVLLKRVDDNWYKGKLGPNTGILPVGYVQVTLEPE
TKQTKKETIPKQLEVSPRSSHSQQSSTISQTSLDSSEPDETEKKNRAAFLAHSVVGHTPA
LASNHRHRGEFDLTELDQVIDQSTATVAQPKPTNIEVHYDYPKPIKPQSPKPPPTQQTLP
LPTVPSYPSSTSSQPSSPRAISPPAPDIDYGQIIGRYVALYAYESSNEDELDLRPGDVVI
VVEICDDGWYVGTSERTGGFGTFPGNYVTAAQ

Nucleotide sequence

Length: 2,038

>KH2012:KH.C7.90.v1.R.ND1-1
GCTTATAGGTCCTTGAAAAAATGTTCATTTGTGATAAAGCGTCGCAGCTCGAGTCTGGAG
GATTTTTCCCAGCAAGATTGGCAAGAATATTTTGACGATATTCTTAAACCGAAATCGCCA
AGTAAAATATGGGACATGGATGTGAAGAAGCAAATGGAAACAACTGTGCAAACTTCATCT
ACAAGTTACACCCCGCCTCATTCGAAAATGTCGGGTTACCATAGCAACGTTACTAAACAA
CCAATTACAACGCAGCATAAGAAAGAATCTACCACGGATGCAGTGAAGCGTAACGTGAAC
CAACAACAACGAAAATCACAAGGTGATGGGATTCGACAACCAGCAAAAGCAAAGTTTGAT
TTTAATTCAAGAACTGGAAAGGAGTTGTCGGTCAAGCGAGGACAAACGGTGATTATCACA
CGTCGTGTGGACGATAATTGGTACATGACGGAGACACCGGATGGCGTAAAGAGCGGAATT
ATCCCCGTGGAGTATTTGAAGGTGATCACATCATCCAGCCAACCTGACAAACCCACCCGG
CACGGACAAGCCAAAGCAAAGTTCGATTTCAACGGGAAAACTAAAAATGAACTTTCCTTC
AAGAAAGGAGATGATTTGGTTTTGTTGAAGCGTGTGGATGATAATTGGTACAAAGGCAAG
CTTGGTCCAAACACCGGTATTCTCCCTGTAGGTTACGTGCAAGTAACGTTGGAACCTGAA
ACTAAACAAACCAAGAAAGAAACGATTCCTAAACAACTTGAGGTTTCGCCGAGATCATCC
CATTCACAACAGTCGTCAACTATTAGCCAGACTAGTTTGGACAGCAGTGAACCAGATGAA
ACTGAGAAAAAGAATCGGGCTGCTTTTCTCGCTCACTCCGTTGTCGGCCACACGCCGGCA
CTAGCGAGCAACCACCGTCACCGGGGGGAGTTCGACCTCACAGAGCTCGACCAAGTTATC
GACCAATCAACCGCGACAGTCGCTCAGCCGAAACCAACCAACATAGAGGTCCATTACGAT
TACCCAAAACCCATAAAACCCCAGTCCCCTAAACCACCCCCAACCCAGCAAACCTTACCC
CTACCTACCGTACCATCTTACCCCTCTTCTACAAGCTCCCAGCCCTCCAGCCCGCGTGCC
ATCTCGCCCCCAGCGCCCGACATCGATTACGGCCAAATTATCGGTCGTTACGTAGCTTTG
TACGCTTACGAATCGAGCAACGAGGACGAACTTGACCTCCGCCCTGGTGACGTCGTTATC
GTGGTCGAAATTTGTGACGACGGCTGGTACGTGGGGACTTCGGAGCGGACCGGGGGGTTC
GGGACTTTCCCCGGAAATTACGTCACTGCTGCGCAATAATGGAAGAAAGCAGTGTTGCCG
AGTAAAACTGCTGCTCTAGTGTTGCCAGCTAAAAACTGCTTCCAGTGTTTCCGAGTTGTT
TTTATCAATCCAGTGTTGACCAATTGACGGGAATTTTCAGAACTTTTGTGACGTAATTAT
GTTGCTTGTGACGTATGAATAGAGGGAGGCGAATCAAAATCTAATTAACAATGACGTTTT
TTGTGACGTCATTATGATTTTAACAATGCTTTTATCACGCAGCCTTTATTACGTCACAAA
CATTCACCATGCACGTCACAATGTGTAAATTTGCCACTGTAGGTCGCTGTGGAGCTATCA
CCTGATTGGTTGAAATAATTTTTTTTCGAAAAAACATAATTTTCTTCCTTCCCATACCCG
ATACATTATCCGCTTGATAATCGCGCTTATTAATCCACAATCGCTACAACAATTCACCTT
GTTGCACTAGAATTATGGTTCAAATATGAATTTTATGCTTGTTGTTTATAATAAAGGTGT
TTATTACGTAATAATCATGTTTTAATATGACGTCATAGGCAACATTATAACATCACAATT
AACATTCTGCTTTTCTTCTGTTACGTCATTTAGCGCATTGTTAACAATAATCATTGATTG
ATATTTATTATTGTGACGTCAGAATCTAATTTTGTTTCAAGATTTGGTGAATACAGCT

InterProScan

PANTHER
Sorbin_SH3 (IPR028506) - T[12-449] 5.3E-63
ProSiteProfiles
SH3_domain (IPR001452) - T[110-171] 12.664 - T[179-238] 13.941 - T[392-452] 15.513
SMART
SH3_domain (IPR001452) - T[113-170] 1.7E-11 - T[182-237] 7.3E-15 - T[395-452] 2.3E-19
PRINTS
SH3_domain (IPR001452) - T[113-123] 8.8E-7 - T[196-211] 8.8E-7 - T[426-435] 8.8E-7 - T[439-451] 8.8E-7
SUPERFAMILY
SH3-like_dom_sf (IPR036028) - T[114-176] 2.76E-13 - T[182-263] 1.29E-16 - T[364-450] 1.12E-19
Pfam
SH3_domain (IPR001452) - T[116-163] 3.2E-9 - T[185-229] 2.0E-11 - T[399-449] 6.5E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SH3R3_HUMAN 29.178 % 128 9.88E-32
SRBS1_HUMAN 40.645 % 115 1.63E-27
SH3R2_HUMAN 28.775 % 116 1.04E-27