- Transcript 'KH2012:KH.L108.56.v1...' >
- Transcript 'KH2012:KH.C7.67.v2.C...'
Transcript Model
Transcript Id
KH2012:KH.C7.67.v2.C.nonSL1-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC7 [4,012,276 / 4,014,938]
Amino acid sequence
Length: 380
>KH.C7.67.v2.C.nonSL1-1
ISVLYTRLSYIINQEKLTFIMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGR
PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVA
PEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDSGD
GVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLC
YVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHET
TYNSIMKCDIDIRKDLYANNVLSGGTTITMKIKIIAPPERKYSVWIGGSILASLSTFQQM
WITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,152
>KH2012:KH.C7.67.v2.C.nonSL1-1
ATATCAGTTCTGTATACTCGTCTTAGTTACATCATCAACCAAGAAAAACTAACTTTCATT
ATGTCTGATTCCGAAGAAGACCAAACCGCTCTTGTGTGCGATAATGGATCTGGTTTGGTA
AAGTCCGGCTTTGCTGGTGATGACGCACCAAGAGCTGTTTTCCCCTCAATCGTTGGTCGG
CCCCGTCATCAGGGTGTCATGGTCGGTATGGGACAAAAAGACAGCTACGTTGGTGACGAA
GCACAAAGCAAGCGAGGTATCTTAACCCTGAAATATCCAATCGAGCACGGTATCATCACC
AACTGGGACGACATGGAAAAAATTTGGCATCACACTTTCTACAACGAGCTCCGTGTTGCT
CCCGAAGAACATCCGACTCTTCTAACCGAAGCCCCACTTAACCCAAAGGCTAACCGAGAA
AAGATGACCCAGATCATGTTTGAAACCTTTAACGTACCTGCTATGTATGTCGCCATCCAA
GCTGTGCTCTCCCTCTACGCATCTGGTAGAACTACAGGAATTGTTATGGATTCTGGTGAT
GGCGTTTCCCACAACGTTCCGATCTATGAGGGTTACGCACTTCCTCACGCAATCGCAAGG
TTGGATTTAGCTGGCCGAGATTTGACCGACTACCTCATGAAGATTCTTACAGAAAGAGGA
TACTCATTTGTCACTACAGCTGAACGAGAAATCGTTCGAGACATCAAAGAAAAACTTTGC
TATGTCGCTCTTGACTTTGAGCAAGAGATGGCGACCGCTGCGTCGTCAACTTCCTTGGAA
AAAAGCTACGAACTTCCCGATGGTCAAGTTATCACTATTGGAAACGAACGATTCCGATGC
CCGGAGACTCTTTTCCAACCATCGTTTATCGGTATGGAATCTGCTGGTATCCATGAGACA
ACCTACAACTCCATCATGAAGTGCGACATTGACATCCGAAAGGATCTTTACGCCAACAAC
GTCCTCTCCGGAGGTACAACCATCACCATGAAGATCAAGATCATTGCTCCTCCAGAGAGG
AAATACTCCGTCTGGATCGGAGGATCCATCCTCGCTTCTCTCTCCACCTTCCAACAGATG
TGGATCACCAAGCAAGAATACGACGAAGCCGGCCCATCTATTGTCCACCGAAAATGTTTT
TAATTTATAAAC
| PANTHER |
Actin (IPR004000) - T[25-379] 1.0E-245 |
| Pfam |
Actin (IPR004000) - T[27-380] 6.0E-132 |
| SMART |
Actin (IPR004000) - T[28-380] 3.9E-211 |
| PRINTS |
Actin (IPR004000) - T[49-58] 1.0E-57 - T[72-83] 1.0E-57 - T[84-106] 1.0E-57 - T[138-151] 1.0E-57 - T[163-182] 1.0E-57 - T[259-275] 1.0E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[76-86] . - T[361-369] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[127-139] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 92.246 % | 719 | 0 |
| ACTS_HUMAN | 92.246 % | 719 | 0 |
| ACTC_HUMAN | 92.063 % | 719 | 0 |