- Region 'REG00001511' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Clone 'AHC0AAA155YJ08' >
- Clone 'cien157781' >
- Transcript 'KH2012:KH.C7.605.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.605.v1.A.ND1-1
Possible name(s)
CNGA1; CNGA2; CNGA3
Gene model
Location
KhC7 [414,696 / 420,926]
Amino acid sequence
Length: 711
>KH.C7.605.v1.A.ND1-1
IFNPEGKPLFIWLGLVTLAWVYSAWSLIARQAFSELKNTIPVGWVIMDYSCDFIYVLDIF
VSARTGYLESGLLVFDSKRLAKHYFYSKYFVLDVLCLLPLDLLYFTIGAFEPLIRFPRFL
KLYRAKQFYRKAEGMTSYPNALRVIILSHTLMLTMHWFACFYYMISESENFHLPVGETRG
WAYPLQLGKNDSEWYTLKRKYLHSIYWSCLTLTTIGEKQSPSTDMEYICTLAAYFLGIFL
FATVVGQVGSVISKKNASRQEFEKMVDNAKTFMKSKGVPKSLCRRVLRWYDYSWSVGALD
GTADVNSLGMLPDTIKVELAIHVNLTSLRKVSIFRLAQPEFLYHLVLKMKTYIFTPGDMI
CRQGEAARQLYIISNGILEVVSDSGTMLARLKTGDFFGEIGVLDLMGGVRKRVANVRSVG
YSEIFTISAEDVEQAMEYYPEAKQLLQTFGRQRLKESSNRPESVSEAKRVTSFTNLQAFA
KGKASDDPKAAVALKAAKKWRSIRKPSRNEKQKKSTSSGSRKGSQDATIEKQPSEGLYYL
YIVPTSSGHNEFKQTTDVSNRSTQENVSVFLRNVESLVRRFVEEETERMVPKSEEGEVIL
QLREELRAKNQEISILQDDVKLLVDKISTAATSYDHPRESKSYSETLNKNNSSRNLLISK
RTYSVDSGLGSNSSILSRKKKNIIPVSVMEDSIAETSDDAAEHQDDVTDTS
Nucleotide sequence
Length: 2,294
>KH2012:KH.C7.605.v1.A.ND1-1
ATATTTAATCCTGAAGGCAAACCTCTGTTCATTTGGTTGGGACTGGTGACGTTGGCTTGG
GTTTATAGTGCGTGGTCTTTGATAGCAAGACAAGCGTTTTCGGAGCTTAAAAATACGATA
CCGGTAGGTTGGGTGATTATGGACTACTCCTGTGACTTCATTTACGTTCTTGACATCTTT
GTAAGCGCAAGGACTGGCTACCTCGAAAGTGGACTTCTTGTTTTTGACTCAAAGCGTCTC
GCCAAGCATTACTTCTATTCAAAGTATTTTGTGCTAGACGTCCTGTGCCTTCTGCCGCTC
GACCTCTTGTACTTTACTATTGGAGCCTTTGAACCTCTGATAAGGTTTCCCCGTTTCCTA
AAACTGTATCGAGCGAAGCAGTTCTACAGAAAAGCCGAGGGAATGACGTCTTATCCTAAC
GCATTGAGAGTTATTATTCTCAGCCATACACTCATGCTTACCATGCATTGGTTCGCATGC
TTCTACTATATGATCAGCGAAAGCGAAAATTTTCATCTGCCAGTGGGTGAAACTAGAGGG
TGGGCTTACCCGTTACAACTTGGAAAAAACGATAGTGAATGGTATACACTCAAACGAAAG
TATCTCCACTCAATATACTGGTCTTGCCTTACACTCACCACAATTGGTGAAAAACAGTCG
CCTTCCACAGACATGGAGTATATCTGTACGCTTGCTGCGTATTTCCTTGGAATATTTCTC
TTCGCCACCGTTGTAGGACAAGTGGGGAGCGTCATCTCGAAAAAGAATGCCAGCAGACAG
GAGTTTGAGAAGATGGTTGACAACGCTAAAACGTTCATGAAGTCAAAAGGTGTCCCGAAG
AGTTTGTGTCGAAGAGTGCTACGTTGGTACGATTACTCTTGGTCGGTAGGGGCATTAGAT
GGTACAGCTGATGTCAATAGTCTTGGAATGCTGCCTGACACTATCAAAGTCGAACTGGCA
ATTCACGTCAATTTAACTTCATTGCGAAAGGTTTCCATATTTCGGCTTGCCCAGCCAGAG
TTTCTGTATCATTTAGTTTTGAAAATGAAGACGTACATATTTACTCCTGGAGATATGATA
TGCCGCCAAGGAGAAGCAGCGAGGCAGTTATACATCATAAGTAACGGGATTCTGGAAGTT
GTAAGTGATTCAGGCACCATGCTTGCAAGACTAAAGACAGGAGACTTCTTCGGGGAAATT
GGAGTTTTAGATTTAATGGGAGGAGTTCGGAAGAGAGTGGCGAATGTTAGAAGTGTGGGG
TACTCTGAGATCTTCACCATCTCCGCTGAAGACGTGGAACAAGCGATGGAATATTACCCA
GAAGCCAAACAACTTCTCCAAACCTTCGGTCGTCAACGACTTAAGGAATCATCAAACAGA
CCCGAGTCTGTGTCGGAGGCTAAGAGAGTGACCAGTTTTACAAATTTACAAGCATTTGCC
AAAGGCAAAGCAAGTGATGATCCAAAGGCGGCAGTTGCCTTGAAAGCTGCAAAAAAATGG
CGATCGATTCGAAAACCATCAAGAAACGAAAAACAAAAGAAGTCCACAAGTTCTGGGAGT
AGAAAAGGGTCACAAGATGCAACTATCGAAAAGCAACCAAGCGAGGGTTTGTATTATTTA
TATATTGTACCGACGAGTTCCGGTCACAACGAATTCAAACAAACCACTGATGTCAGCAAT
CGAAGCACTCAAGAAAACGTCTCGGTGTTTCTACGCAACGTGGAGAGTCTGGTTAGAAGA
TTTGTGGAGGAAGAAACAGAGAGAATGGTTCCGAAGTCGGAGGAAGGTGAAGTGATTCTT
CAGCTCAGAGAGGAGCTGAGAGCAAAGAATCAAGAGATCAGCATCCTTCAAGATGATGTC
AAGTTGCTGGTGGATAAAATCAGCACGGCAGCGACTTCCTACGATCACCCACGGGAGTCG
AAAAGTTACTCGGAAACACTGAACAAGAACAACAGTTCACGAAATTTGTTGATTTCGAAG
CGAACTTATAGCGTGGACAGCGGACTCGGGAGTAATTCATCAATTTTGTCGCGAAAAAAG
AAAAACATTATTCCTGTATCTGTTATGGAGGACAGTATTGCTGAGACGAGCGATGATGCA
GCGGAGCATCAGGATGACGTTACAGATACGTCTTGATTACGCCACAGTTTCGTCATGATT
ACGTCACAGATACGTCATGATAAATTAATGTCACTGGTCACTTTTGTAGCAAAAGAGATT
GAAATCTAAAACTTTTATTTCTGGACTATAATTTTCGTTCAGCTTGTTCTTACTGTGTGT
TTTGGTGTTGAATG
| Pfam |
Ion_trans_dom (IPR005821) - T[11-256] 4.6E-19 |
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[257-454] 3.67E-41 |
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[326-453] 1.8E-32 |
| CDD |
cNMP-bd_dom (IPR000595) - T[333-446] 1.16446E-22 |
| SMART |
cNMP-bd_dom (IPR000595) - T[333-454] 5.1E-19 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[333-436] 21.777 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[354-437] 1.8E-15 |
| ProSitePatterns |
cNMP-bd_CS (IPR018488) - T[360-376] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNGA3_HUMAN | 41.277 % | 378 | 1.94E-121 |
| CNGA1_HUMAN | 40.481 % | 369 | 5.48E-118 |
| CNGA2_HUMAN | 39.168 % | 364 | 1.8E-116 |