- Transcript 'KH2012:KH.C7.575.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.575.v1.A.SL1-1
Possible name(s)
SDHB
Gene model
Location
KhC7 [873,114 / 875,465]
Amino acid sequence
Length: 302
>KH.C7.575.v1.A.SL1-1
LQKGILTVTTMSSGLRISRTVLRSSSPVLSLLTTQTLRCSATAAAQTTEQNQRLKTFSIY
RWNPEAEGDMKLPVMHKYQVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAM
NIGGTNTLACLARIDTNLSKKTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDAS
KLGKENFQSVADRQKLDGLYECILCACCSTSCPSYWWSSDKYLGPAVLMQAYRWIIDSRD
EYQKERLDRMNDPFSLYKCHTIMNCTKACPKGLNPGLAIAELKKMLASHNSAEVASPKPA
AQ
Nucleotide sequence
Length: 1,195
>KH2012:KH.C7.575.v1.A.SL1-1
TTTCAGGTTTGAATTAATATAATTGCAAAAGGGAATCTTAACTGTAACAACCATGTCGTC
TGGACTTCGAATTTCTCGTACAGTGTTGCGAAGTTCGTCTCCAGTACTGTCACTTTTAAC
CACTCAGACTCTGCGTTGTTCAGCAACAGCTGCTGCCCAAACAACCGAACAAAATCAGCG
TTTGAAAACATTTTCAATTTACCGATGGAATCCTGAAGCAGAGGGTGACATGAAACTCCC
TGTCATGCACAAGTATCAAGTGGATTTAAATGATTGTGGTCCAATGGTTCTTGATGCTCT
GATCAAAATAAAGAACGAACAAGATCCAACTTTGACCTTCCGTAGATCATGCAGAGAGGG
AATCTGTGGTTCATGTGCAATGAACATTGGTGGTACTAACACCCTGGCTTGCCTAGCGAG
AATTGATACCAACTTGTCAAAGAAAACCAAGATATATCCATTGCCTCATATGTATGTGGT
GAAAGACCTTGTACCAGATATGAACAACTTCTATGCACAATATCGCTCTATTGAACCGTT
CCTGAAGCAGAAAGATGCAAGTAAACTTGGAAAAGAAAACTTTCAATCTGTAGCAGACAG
GCAAAAGTTAGATGGTTTATACGAATGCATCCTCTGTGCTTGTTGTTCCACTTCATGTCC
AAGTTATTGGTGGAGTTCAGACAAATACCTTGGCCCTGCAGTTTTAATGCAAGCATACAG
GTGGATTATAGATAGCAGAGATGAATACCAGAAAGAGAGACTGGACAGAATGAATGATCC
TTTTTCACTTTACAAATGCCATACTATAATGAACTGTACGAAAGCATGTCCAAAGGGTTT
AAATCCTGGTTTGGCAATTGCTGAATTAAAGAAGATGCTTGCAAGCCATAATTCAGCAGA
GGTGGCCTCACCAAAACCAGCAGCGCAGTGAATTCAATCTAGTGTTATGTTTACCTGGTA
GAAATGTAATTTAGATCATAACAAAGTCACTGGTCACGCATACAAAAACAAAGTTTCCTT
TTGCTATAAATGTTCTCCAAAAATTCTCAACAAAAATATATAGTGATATATATGTTGTCA
TGCTAAACTTAAGAGTTCCTAAATTATTTGTACAGCGCTTCATGTGGACTTCTGCGAGAT
ATATTCTTTGTTTTTTCAAGTGTGAATACATAAATATTTGAAAGTGGTAATTTAA
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[42-159] 3.1E-46 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[53-159] 1.7E-27 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[56-164] 7.7E-31 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[59-283] 1.4E-82 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[70-150] 9.535 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[89-138] 0.00188739 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[110-118] . |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[160-288] 1.26E-36 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[160-301] 3.5E-60 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[192-222] 7.601 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[202-213] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 67.87 % | 398 | 5.29E-141 |
