- Transcript 'Cisavi.CG.ENS81.R51....' >
- Transcript 'KH2012:KH.C3.312.v1....' >
- Molecular Tool 'En>Ngn::WRPW (Stolfi 2011)' >
- Region 'REG00001421' >
- Transcript 'KH2012:KH.C7.568.v3....'
Transcript Model
Transcript Id
KH2012:KH.C7.568.v3.R.ND1-1
Possible name(s)
EPHA4; EPHA7; EPHB2
Gene model
Location
KhC7 [3,849,266 / 3,862,405]
Amino acid sequence
Length: 1,003
>KH.C7.568.v3.R.ND1-1
RMFFLFIVFYCISIVTGEIHVLYNTKVATSDLDWALHPTYGAWEELSGLDVDGNTIRYHQ
VCNTGMDEQDNWVRSPFIDAKSAQRIYMDIEFSVMKCEECRETFALYYYPSSSDTATTTF
PPWRENPYIKIDTLAAGERFDSETVGAEGINKKTLVIGPLSRRGFYIAAQDQGACMSIMS
LKLYYYHCEETTHNLAYFPNTISGGGIAELVSQSGKCVSNSVYANEVPKYRCNIYGEWQV
PTGSCQCRAGYEPNTQLTACTGCMVGKYKSTNGNTPCQVCPQHSVTHSTSASHCTCVAGH
YRAENDPISQACTRPPTKPRNVTHVQNKTSLLLSWVPPSTTGGRTDIYYSISCELCDSEH
ENCQPCNVDVQYRPSNHQHTTTTYMEVSNLNPFSCYKFKVSSSNGVSRVSVEPEQFELIK
ICTNAAAPSAVTGLKFIWIGEVSATLSWLPPTHSNKIVGYEVQLFQNNQRLKLTKIMEVS
TPNVTINGLNPGWKYVVMVRACNNDGCGQFSEKLQLVTYDKGSEPESIVEGSTTWIGGVI
GGVLVIVIIIIVVMIKRRQTDKKKRKEIQARTKLNENTQQLNQSSFLQTAGRTYVDYRDP
HNGVKEIATEIDQTRIKIDSVIGRGEFGEVCRGKMLTGKTTTSVAVKRLKHGASLIDHTN
FLREACTMAQFKDPNIIQLKGVVTKSIPAMIITEFMEHGSLDKFLQARSGQLTVLQLLEM
LRGIASGMKYLSSMKYVHRDLAARNILVNSQLVCKVSDFGLSRTLENDPQATYTTQGGKI
ALRWTAPESIRCRQFTSASDVWSYGIVMWEVMSYGEKPYWDMSNEVVTEVLEDGYRLPSP
EGCPTPVHSLMLKCWSYEPKRRPTLLEIIKTLDHFIKQPSSLQDDMEADASAPLLKPDSP
NSIQDVSTLDEWLDMVKLGRYRRSFHNNGINDLESLAHISESELDRLGIASPSHRTRLQG
GINTLRQHLVEVNEVQSSSNAPYDAHASTLPIAHGKPSNPVAV
Nucleotide sequence
Length: 3,218
>KH2012:KH.C7.568.v3.R.ND1-1
GTCCGAGTGAGCACTCGTTGTGTCAGTTGTTCTACAAAGACGGTGTTGAAGAGTATTAAG
TTATTGAAACGCGTTACAGAAAGAAAGATTAGTTTATACTCAGCACTTTTAAAGGATGTT
TTTTCTATTTATCGTCTTCTACTGCATTTCAATTGTAACTGGAGAAATACACGTTTTATA
CAACACTAAAGTTGCGACAAGTGATTTAGATTGGGCCTTACACCCCACATATGGAGCGTG
GGAGGAATTGAGCGGACTCGATGTAGACGGGAACACAATACGTTACCACCAAGTATGTAA
CACAGGAATGGATGAACAGGACAATTGGGTCCGATCCCCATTTATCGACGCAAAGTCGGC
CCAGCGTATTTATATGGACATCGAATTTTCCGTTATGAAATGTGAGGAATGTCGCGAAAC
ATTCGCGTTGTATTATTACCCGTCCAGCTCCGATACTGCTACCACTACATTCCCGCCTTG
GAGAGAAAACCCCTATATCAAAATCGATACATTAGCAGCTGGTGAAAGATTCGATTCCGA
AACCGTAGGTGCGGAGGGAATTAATAAGAAAACATTGGTTATTGGACCATTATCAAGACG
CGGATTTTATATCGCTGCTCAGGACCAGGGCGCCTGTATGTCAATTATGAGTTTGAAATT
GTATTATTACCACTGTGAGGAAACGACCCATAACCTGGCTTATTTTCCGAACACCATATC
GGGCGGCGGTATCGCTGAATTGGTGTCGCAATCTGGAAAGTGCGTTTCGAACTCAGTATA
CGCGAATGAAGTTCCGAAATACCGATGTAACATTTACGGCGAATGGCAAGTCCCTACTGG
TTCTTGTCAGTGCAGAGCTGGGTATGAACCAAATACACAACTCACCGCATGTACAGGCTG
CATGGTTGGCAAGTACAAATCTACAAATGGCAATACACCTTGTCAAGTCTGCCCACAGCA
CAGCGTAACACATTCAACATCCGCTAGTCACTGTACTTGTGTGGCTGGACATTATCGAGC
CGAAAACGACCCAATCAGCCAAGCCTGCACTCGGCCCCCCACTAAGCCTCGGAATGTGAC
TCATGTTCAAAACAAGACTTCTCTCTTATTGTCATGGGTCCCACCTTCAACTACAGGGGG
TAGAACTGATATATATTACAGCATATCATGTGAACTGTGCGATTCTGAGCATGAGAACTG
TCAGCCCTGCAATGTTGATGTTCAATACAGACCAAGCAACCACCAGCACACCACAACAAC
GTACATGGAAGTCTCAAATCTTAATCCCTTCTCATGCTATAAGTTCAAGGTTTCTTCTTC
AAATGGTGTTTCTAGGGTCAGCGTGGAGCCCGAACAATTTGAGCTAATAAAGATTTGCAC
CAACGCCGCTGCTCCGTCTGCTGTCACGGGCCTTAAGTTTATTTGGATTGGGGAAGTTTC
GGCAACTTTAAGTTGGTTGCCGCCCACACATAGCAACAAGATTGTTGGATATGAAGTGCA
ATTGTTCCAAAACAATCAGCGTTTAAAACTGACAAAAATTATGGAGGTTTCAACACCAAA
CGTTACAATAAATGGTTTGAACCCTGGATGGAAATATGTAGTGATGGTACGAGCATGTAA
TAACGATGGGTGCGGCCAGTTCAGTGAAAAACTGCAGCTAGTTACTTATGACAAAGGTTC
TGAGCCTGAATCTATAGTGGAAGGCAGTACTACATGGATTGGAGGAGTTATTGGTGGGGT
TCTAGTTATCGTTATAATAATTATTGTCGTGATGATAAAAAGACGACAAACCGATAAAAA
GAAACGAAAAGAAATCCAAGCCAGAACAAAACTCAACGAAAACACTCAACAACTAAACCA
GAGTAGCTTTTTACAAACCGCAGGGCGAACTTATGTTGATTACCGTGACCCCCACAATGG
GGTAAAAGAAATCGCAACCGAGATTGATCAAACGAGAATTAAGATCGACAGTGTTATTGG
AAGAGGTGAGTTCGGTGAAGTGTGTCGTGGTAAAATGTTGACGGGCAAAACAACGACTTC
TGTCGCCGTGAAACGATTAAAACACGGAGCAAGTTTAATTGACCACACCAACTTTCTACG
AGAGGCATGCACTATGGCACAGTTTAAAGACCCGAATATTATTCAACTGAAAGGAGTGGT
TACTAAAAGCATCCCTGCAATGATAATCACGGAATTTATGGAGCATGGTTCGCTTGATAA
ATTTTTACAGGCTCGTTCTGGGCAGCTTACTGTTCTACAATTACTTGAAATGTTACGCGG
CATCGCAAGTGGAATGAAATATCTTTCATCAATGAAATATGTTCATCGAGATTTAGCTGC
AAGAAATATCCTTGTTAATTCTCAACTTGTTTGTAAAGTATCCGACTTTGGTCTTTCAAG
AACTCTTGAGAATGACCCTCAAGCTACCTATACTACACAGGGTGGAAAGATCGCCCTCCG
CTGGACAGCGCCTGAGAGCATCCGTTGTCGTCAATTTACATCAGCAAGTGATGTATGGAG
CTATGGGATCGTTATGTGGGAAGTCATGTCTTATGGGGAGAAACCTTACTGGGATATGAG
TAATGAAGTTGTGACAGAGGTATTAGAAGATGGATACAGGCTCCCGTCACCTGAGGGTTG
TCCTACTCCTGTTCATAGTTTGATGTTGAAATGTTGGTCTTATGAACCGAAACGCAGACC
AACCCTGCTGGAAATCATTAAGACTTTGGATCATTTTATTAAACAGCCCAGCTCTCTTCA
AGATGACATGGAAGCTGATGCAAGTGCCCCGCTGTTAAAGCCAGACAGTCCCAACAGCAT
TCAAGATGTATCAACATTAGACGAGTGGTTAGACATGGTAAAACTTGGAAGATACCGCAG
GAGTTTTCATAACAACGGAATTAATGATCTTGAAAGCTTGGCTCACATAAGTGAAAGTGA
GTTGGACAGACTTGGCATAGCGTCACCTTCCCACCGCACCAGACTACAGGGAGGCATTAA
CACTTTACGACAACATTTGGTCGAAGTAAACGAAGTTCAATCCAGCAGTAACGCACCTTA
CGACGCCCACGCTTCAACGCTACCAATAGCTCACGGGAAACCAAGCAATCCTGTTGCAGT
TTGATCCTATTTTTAAAACGCCACACAATGTATTTTCATATAAATTTGTGTTTTTTTCGT
GTATTTATTATTTAATAAAGATTACTGTTTCAAATTTC
| PIRSF |
Tyr_kinase_ephrin_rcpt (IPR016257) - T[1-978] 0.0 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[13-188] 4.7E-55 |
| ProSiteProfiles |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[19-193] 51.925 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[20-186] 2.89E-54 |
| SMART |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[21-188] 1.2E-62 |
| Pfam |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[21-188] 9.1E-54 |
| SMART |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[250-294] 3.4E-4 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[315-426] 16.663 - T[427-521] 17.215 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[315-519] 1.46E-32 |
| SMART |
FN3_dom (IPR003961) - T[316-410] 2.6E-6 - T[428-508] 1.6E-10 |
| Gene3D |
Ig-like_fold (IPR013783) - T[316-422] 1.4E-21 - T[423-522] 4.9E-17 |
| CDD |
FN3_dom (IPR003961) - T[316-405] 4.88663E-8 - T[428-518] 4.70222E-14 |
| Pfam |
FN3_dom (IPR003961) - T[318-406] 1.0E-10 - T[429-511] 3.1E-14 |
| Pfam |
Eph_TM (IPR027936) - T[537-612] 8.7E-12 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[610-890] 6.6E-78 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[616-876] 39.043 |
| SMART |
Tyr_kinase_cat_dom (IPR020635) - T[616-872] 5.7E-126 |
| Pfam |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[617-872] 2.8E-92 |
| ProSitePatterns |
Protein_kinase_ATP_BS (IPR017441) - T[622-647] . |
| PRINTS |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[693-706] 2.9E-33 - T[730-748] 2.9E-33 - T[780-790] 2.9E-33 - T[799-821] 2.9E-33 - T[843-865] 2.9E-33 |
| ProSitePatterns |
Tyr_kinase_AS (IPR008266) - T[736-748] . |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[897-966] 1.83E-15 |
| SMART |
SAM (IPR001660) - T[901-968] 6.8E-9 |
| ProSiteProfiles |
SAM (IPR001660) - T[904-968] 15.489 |
| Pfam |
SAM (IPR001660) - T[905-966] 3.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPHA4_HUMAN | 42.572 % | 791 | 0 |
| EPHA7_HUMAN | 41.556 % | 768 | 0 |
| EPHB2_HUMAN | 43.061 % | 790 | 0 |