Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,003

>KH.C7.568.v3.A.SL6-1
RMFFLFIVFYCISIVTGEIHVLYNTKVATSDLDWALHPTYGAWEELSGLDVDGNTIRYHQ
VCNTGMDEQDNWVRSPFIDAKSAQRIYMDIEFSVMKCEECRETFALYYYPSSSDTATTTF
PPWRENPYIKIDTLAAGERFDSETVGAEGINKKTLVIGPLSRRGFYIAAQDQGACMSIMS
LKLYYYHCEETTHNLAYFPNTISGGGIAELVSQSGKCVSNSVYANEVPKYRCNIYGEWQV
PTGSCQCRAGYEPNTQLTACTGCMVGKYKSTNGNTPCQVCPQHSVTHSTSASHCTCVAGH
YRAENDPISQACTRPPTKPRNVTHVQNKTSLLLSWVPPSTTGGRTDIYYSISCELCDSEH
ENCQPCNVDVQYRPSNHQHTTTTYMEVSNLNPFSCYKFKVSSSNGVSRVSVEPEQFELIK
ICTNAAAPSAVTGLKFIWIGEVSATLSWLPPTHSNKIVGYEVQLFQNNQRLKLTKIMEVS
TPNVTINGLNPGWKYVVMVRACNNDGCGQFSEKLQLVTYDKGSEPESIVEGSTTWIGGVI
GGVLVIVIIIIVVMIKRRQTDKKKRKEIQARTKLNENTQQLNQSSFLQTAGRTYVDYRDP
HNGVKEIATEIDQTRIKIDSVIGRGEFGEVCRGKMLTGKTTTSVAVKRLKHGASLIDHTN
FLREACTMAQFKDPNIIQLKGVVTKSIPAMIITEFMEHGSLDKFLQARSGQLTVLQLLEM
LRGIASGMKYLSSMKYVHRDLAARNILVNSQLVCKVSDFGLSRTLENDPQATYTTQGGKI
ALRWTAPESIRCRQFTSASDVWSYGIVMWEVMSYGEKPYWDMSNEVVTEVLEDGYRLPSP
EGCPTPVHSLMLKCWSYEPKRRPTLLEIIKTLDHFIKQPSSLQDDMEADASAPLLKPDSP
NSIQDVSTLDEWLDMVKLGRYRRSFHNNGINDLESLAHISESELDRLGIASPSHRTRLQG
GINTLRQHLVEVNEVQSSSNAPYDAHASTLPIAHGKPSNPVAV

Nucleotide sequence

Length: 3,139

>KH2012:KH.C7.568.v3.A.SL6-1
AAAGAAAGATTAGTTTATACTCAGCACTTTTAAAGGATGTTTTTTCTATTTATCGTCTTC
TACTGCATTTCAATTGTAACTGGAGAAATACACGTTTTATACAACACTAAAGTTGCGACA
AGTGATTTAGATTGGGCCTTACACCCCACATATGGAGCGTGGGAGGAATTGAGCGGACTC
GATGTAGACGGGAACACAATACGTTACCACCAAGTATGTAACACAGGAATGGATGAACAG
GACAATTGGGTCCGATCCCCATTTATCGACGCAAAGTCGGCCCAGCGTATTTATATGGAC
ATCGAATTTTCCGTTATGAAATGTGAGGAATGTCGCGAAACATTCGCGTTGTATTATTAC
CCGTCCAGCTCCGATACTGCTACCACTACATTCCCGCCTTGGAGAGAAAACCCCTATATC
AAAATCGATACATTAGCAGCTGGTGAAAGATTCGATTCCGAAACCGTAGGTGCGGAGGGA
ATTAATAAGAAAACATTGGTTATTGGACCATTATCAAGACGCGGATTTTATATCGCTGCT
CAGGACCAGGGCGCCTGTATGTCAATTATGAGTTTGAAATTGTATTATTACCACTGTGAG
GAAACGACCCATAACCTGGCTTATTTTCCGAACACCATATCGGGCGGCGGTATCGCTGAA
TTGGTGTCGCAATCTGGAAAGTGCGTTTCGAACTCAGTATACGCGAATGAAGTTCCGAAA
TACCGATGTAACATTTACGGCGAATGGCAAGTCCCTACTGGTTCTTGTCAGTGCAGAGCT
GGGTATGAACCAAATACACAACTCACCGCATGTACAGGCTGCATGGTTGGCAAGTACAAA
TCTACAAATGGCAATACACCTTGTCAAGTCTGCCCACAGCACAGCGTAACACATTCAACA
TCCGCTAGTCACTGTACTTGTGTGGCTGGACATTATCGAGCCGAAAACGACCCAATCAGC
CAAGCCTGCACTCGGCCCCCCACTAAGCCTCGGAATGTGACTCATGTTCAAAACAAGACT
TCTCTCTTATTGTCATGGGTCCCACCTTCAACTACAGGGGGTAGAACTGATATATATTAC
AGCATATCATGTGAACTGTGCGATTCTGAGCATGAGAACTGTCAGCCCTGCAATGTTGAT
GTTCAATACAGACCAAGCAACCACCAGCACACCACAACAACGTACATGGAAGTCTCAAAT
CTTAATCCCTTCTCATGCTATAAGTTCAAGGTTTCTTCTTCAAATGGTGTTTCTAGGGTC
AGCGTGGAGCCCGAACAATTTGAGCTAATAAAGATTTGCACCAACGCCGCTGCTCCGTCT
GCTGTCACGGGCCTTAAGTTTATTTGGATTGGGGAAGTTTCGGCAACTTTAAGTTGGTTG
CCGCCCACACATAGCAACAAGATTGTTGGATATGAAGTGCAATTGTTCCAAAACAATCAG
CGTTTAAAACTGACAAAAATTATGGAGGTTTCAACACCAAACGTTACAATAAATGGTTTG
AACCCTGGATGGAAATATGTAGTGATGGTACGAGCATGTAATAACGATGGGTGCGGCCAG
TTCAGTGAAAAACTGCAGCTAGTTACTTATGACAAAGGTTCTGAGCCTGAATCTATAGTG
GAAGGCAGTACTACATGGATTGGAGGAGTTATTGGTGGGGTTCTAGTTATCGTTATAATA
ATTATTGTCGTGATGATAAAAAGACGACAAACCGATAAAAAGAAACGAAAAGAAATCCAA
GCCAGAACAAAACTCAACGAAAACACTCAACAACTAAACCAGAGTAGCTTTTTACAAACC
GCAGGGCGAACTTATGTTGATTACCGTGACCCCCACAATGGGGTAAAAGAAATCGCAACC
GAGATTGATCAAACGAGAATTAAGATCGACAGTGTTATTGGAAGAGGTGAGTTCGGTGAA
GTGTGTCGTGGTAAAATGTTGACGGGCAAAACAACGACTTCTGTCGCCGTGAAACGATTA
AAACACGGAGCAAGTTTAATTGACCACACCAACTTTCTACGAGAGGCATGCACTATGGCA
CAGTTTAAAGACCCGAATATTATTCAACTGAAAGGAGTGGTTACTAAAAGCATCCCTGCA
ATGATAATCACGGAATTTATGGAGCATGGTTCGCTTGATAAATTTTTACAGGCTCGTTCT
GGGCAGCTTACTGTTCTACAATTACTTGAAATGTTACGCGGCATCGCAAGTGGAATGAAA
TATCTTTCATCAATGAAATATGTTCATCGAGATTTAGCTGCAAGAAATATCCTTGTTAAT
TCTCAACTTGTTTGTAAAGTATCCGACTTTGGTCTTTCAAGAACTCTTGAGAATGACCCT
CAAGCTACCTATACTACACAGGGTGGAAAGATCGCCCTCCGCTGGACAGCGCCTGAGAGC
ATCCGTTGTCGTCAATTTACATCAGCAAGTGATGTATGGAGCTATGGGATCGTTATGTGG
GAAGTCATGTCTTATGGGGAGAAACCTTACTGGGATATGAGTAATGAAGTTGTGACAGAG
GTATTAGAAGATGGATACAGGCTCCCGTCACCTGAGGGTTGTCCTACTCCTGTTCATAGT
TTGATGTTGAAATGTTGGTCTTATGAACCGAAACGCAGACCAACCCTGCTGGAAATCATT
AAGACTTTGGATCATTTTATTAAACAGCCCAGCTCTCTTCAAGATGACATGGAAGCTGAT
GCAAGTGCCCCGCTGTTAAAGCCAGACAGTCCCAACAGCATTCAAGATGTATCAACATTA
GACGAGTGGTTAGACATGGTAAAACTTGGAAGATACCGCAGGAGTTTTCATAACAACGGA
ATTAATGATCTTGAAAGCTTGGCTCACATAAGTGAAAGTGAGTTGGACAGACTTGGCATA
GCGTCACCTTCCCACCGCACCAGACTACAGGGAGGCATTAACACTTTACGACAACATTTG
GTCGAAGTAAACGAAGTTCAATCCAGCAGTAACGCACCTTACGACGCCCACGCTTCAACG
CTACCAATAGCTCACGGGAAACCAAGCAATCCTGTTGCAGTTTGATCCTATTTTTAAAAC
GCCACACAATGTATTTTCATATAAATTTGTGTTTTTTTCGTGTATTTATTATTTAATAAA
GATTACTGTTTCAAATTTC

InterProScan

PIRSF	Tyr_kinase_ephrin_rcpt (IPR016257) - T[1-978] 0.0
Gene3D	Galactose-bd-like_sf (IPR008979) - T[13-188] 4.7E-55
ProSiteProfiles	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[19-193] 51.925
SUPERFAMILY	Galactose-bd-like_sf (IPR008979) - T[20-186] 2.89E-54
SMART	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[21-188] 1.2E-62
Pfam	Ephrin_rcpt_lig-bd_dom (IPR001090) - T[21-188] 9.1E-54
SMART	Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[250-294] 3.4E-4
ProSiteProfiles	FN3_dom (IPR003961) - T[315-426] 16.663 - T[427-521] 17.215
SUPERFAMILY	FN3_sf (IPR036116) - T[315-519] 1.46E-32
SMART	FN3_dom (IPR003961) - T[316-410] 2.6E-6 - T[428-508] 1.6E-10
Gene3D	Ig-like_fold (IPR013783) - T[316-422] 1.4E-21 - T[423-522] 4.9E-17
CDD	FN3_dom (IPR003961) - T[316-405] 4.88663E-8 - T[428-518] 4.70222E-14
Pfam	FN3_dom (IPR003961) - T[318-406] 1.0E-10 - T[429-511] 3.1E-14
Pfam	Eph_TM (IPR027936) - T[537-612] 8.7E-12
SUPERFAMILY	Kinase-like_dom_sf (IPR011009) - T[610-890] 6.6E-78
ProSiteProfiles	Prot_kinase_dom (IPR000719) - T[616-876] 39.043
SMART	Tyr_kinase_cat_dom (IPR020635) - T[616-872] 5.7E-126
Pfam	Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[617-872] 2.8E-92
ProSitePatterns	Protein_kinase_ATP_BS (IPR017441) - T[622-647] .
PRINTS	Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[693-706] 2.9E-33 - T[730-748] 2.9E-33 - T[780-790] 2.9E-33 - T[799-821] 2.9E-33 - T[843-865] 2.9E-33
ProSitePatterns	Tyr_kinase_AS (IPR008266) - T[736-748] .
SUPERFAMILY	SAM/pointed_sf (IPR013761) - T[897-966] 1.83E-15
SMART	SAM (IPR001660) - T[901-968] 6.8E-9
ProSiteProfiles	SAM (IPR001660) - T[904-968] 15.489
Pfam	SAM (IPR001660) - T[905-966] 3.5E-11