- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.L170.59.v1...' >
- Transcript 'KH2012:KH.C7.477.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.477.v1.R.ND1-1
Possible name(s)
MYB; MYBL1; SNAPC4
Gene model
Location
KhC7 [5,876,151 / 5,884,686]
Amino acid sequence
Length: 915
>KH.C7.477.v1.R.ND1-1
CKVNYFKLQNNFMDFRSSDEEIAEDQLRLQLQTFPLDLNFEEEESDDNEDINETFEPTSP
QPTTTFDAVSQSGEDTQEDDETEEEVIDLSVDLPPTPVNLLKLNLAYQEVIEQEITKVKQ
LLQENHCQTSILIESEQRMNIKSRYKMIVPGYSFMRTPFFKDKEGNGPTNIEITRRASDV
GELFERNAMPPGKWKKPTLQALISGVEREARRHVTEPLLSKLEYLNDMLNGPDHEEVKQK
ISEVQKQIDEKSKVPITGLLGDREREWDWDTIANIDLDMQATPANCACYWKSHLHPSINN
DAWSKAEEKNFTSILEKHTDRDWNWISKELNTGRTPLQCAQYYQRTLNKDFKRKPWTPEE
DQQLVKCIHRLKVGNCIPYTMVALNLNSRTNYQVVHRWSKTLDPFYKKTRWEPEEDGALL
RAVSIYGEKWARIRDLNIVPNRHDGQLRERYKNCLSNWKRGPWIKSEDRKLLKLVHEHGE
RWSLVARYMGGRTDSQCVKRFNTIKRAVSMGRALIYNPSTTYSNNVHKIRKTLLEKISAE
TTPVKTEKDNDNDKNKDKENGDDGPPEPDAPTDTPHKHLIKISSKPKQKVLPAQDALLNM
SSNLSSREVLELYIELMKTRRGRRGGKMGIAGKMNHEDIQINFELKKFLEERYKPMKRQS
RKLENDNLGFCLKEITKNSKSISSKDIFIYYIKALNINAARALESIRIKKDKQREGKVTL
RSVLRNEIEAGNKAVGEMRKKMSKRNADSLTSSDITSDNTDITKQQSTSNKADSDVTNKS
RAFARNLYLPLCAPNRATTKAYYALVKDRERRVTQAKTILRLDDATDETSGGKFKTVDLL
ADMRARYDYKVFRSRFNALFTWSTFLRSLVPYRRTGNDRVLRPAIRIKRPYYDVTIPSAK
RHKPNDSTIDNESSV
Nucleotide sequence
Length: 2,804
>KH2012:KH.C7.477.v1.R.ND1-1
TGTAAAGTCAATTATTTTAAGCTTCAAAACAATTTTATGGATTTTAGAAGCAGTGATGAA
GAAATTGCGGAAGATCAGCTTCGATTGCAACTGCAAACGTTTCCACTCGACCTTAATTTC
GAAGAAGAAGAGAGCGATGACAATGAAGATATAAATGAGACGTTTGAACCAACTTCACCC
CAACCTACAACAACATTCGATGCCGTCAGCCAATCAGGTGAAGACACGCAAGAAGATGAT
GAAACGGAGGAGGAGGTCATCGACCTCTCAGTTGACCTCCCCCCGACCCCCGTTAACTTG
TTAAAACTAAACCTAGCGTACCAAGAAGTTATCGAACAAGAGATAACGAAGGTGAAACAA
TTGTTGCAGGAAAATCATTGCCAAACTTCCATATTGATCGAGTCGGAGCAACGAATGAAC
ATTAAAAGTCGTTACAAGATGATTGTGCCCGGTTATTCGTTCATGAGGACCCCGTTTTTT
AAGGATAAGGAAGGTAACGGTCCAACGAATATCGAGATAACTCGTCGCGCTTCAGATGTC
GGTGAATTATTCGAGCGTAACGCCATGCCCCCGGGAAAGTGGAAGAAACCAACGCTTCAA
GCGTTAATCAGTGGAGTGGAACGTGAAGCGCGACGTCATGTGACCGAACCTTTGTTGTCG
AAACTTGAATATTTGAACGACATGTTAAACGGACCCGACCATGAGGAAGTCAAACAGAAA
ATTTCCGAAGTTCAGAAACAAATTGATGAAAAAAGTAAAGTCCCAATAACTGGGTTGTTG
GGCGATCGTGAGCGCGAGTGGGATTGGGACACGATAGCCAACATAGACCTGGATATGCAA
GCTACTCCGGCTAACTGTGCGTGTTACTGGAAGTCCCATCTTCATCCGTCTATTAACAAT
GATGCCTGGAGCAAAGCAGAAGAAAAGAACTTCACATCAATACTTGAGAAACACACAGAC
CGAGATTGGAACTGGATATCGAAGGAGTTAAACACGGGACGTACCCCGTTACAATGTGCA
CAGTATTACCAAAGAACGCTCAACAAGGACTTCAAAAGGAAGCCCTGGACACCAGAAGAA
GACCAGCAATTGGTGAAATGCATCCATAGATTAAAAGTCGGGAATTGCATCCCGTACACA
ATGGTTGCATTAAACCTCAACTCACGAACAAACTACCAAGTCGTCCATCGATGGTCAAAA
ACGCTCGACCCCTTCTATAAAAAAACAAGATGGGAGCCAGAAGAAGACGGGGCATTGTTG
CGAGCGGTTAGCATATATGGGGAAAAGTGGGCAAGAATACGTGACCTTAATATTGTTCCT
AATCGACATGATGGTCAACTGAGGGAAAGATATAAGAACTGCCTCAGCAACTGGAAGCGC
GGCCCATGGATCAAATCAGAGGATCGCAAACTATTAAAGCTCGTACACGAGCATGGGGAA
CGGTGGTCGTTGGTTGCGAGGTACATGGGGGGGAGGACGGACTCGCAATGCGTGAAGAGA
TTTAATACGATTAAACGAGCTGTAAGCATGGGCCGTGCATTAATCTACAATCCTTCTACC
ACGTATTCAAATAATGTTCACAAGATTCGGAAAACTTTGTTGGAAAAAATATCCGCTGAG
ACAACCCCGGTTAAAACAGAAAAAGACAACGACAACGATAAAAATAAAGATAAAGAAAAT
GGTGATGATGGTCCACCAGAGCCAGATGCACCTACAGATACACCACACAAACATCTTATA
AAAATATCTTCGAAACCGAAACAAAAAGTTTTGCCGGCACAGGACGCTCTTCTGAATATG
TCCAGCAACTTATCGAGCCGCGAGGTGTTGGAATTATACATTGAATTGATGAAGACCAGA
CGTGGTAGAAGAGGGGGCAAGATGGGAATAGCGGGGAAGATGAATCACGAGGATATTCAG
ATCAATTTTGAACTTAAGAAGTTTTTAGAGGAGAGGTACAAACCAATGAAACGACAATCG
CGGAAACTCGAAAACGACAATCTCGGATTTTGTTTGAAAGAAATCACCAAGAATTCAAAA
TCGATTTCGTCCAAAGATATTTTTATTTATTATATAAAAGCTCTAAACATCAACGCAGCT
CGAGCTCTAGAATCGATTCGTATCAAGAAAGATAAACAACGAGAGGGAAAAGTGACCTTG
AGGTCGGTGCTACGGAACGAGATCGAGGCGGGAAACAAAGCTGTTGGTGAAATGAGGAAA
AAAATGAGTAAACGAAATGCTGACTCATTAACCTCCAGTGACATCACAAGTGACAACACT
GACATCACAAAACAACAATCGACGAGTAACAAAGCCGATAGTGATGTCACAAACAAATCT
CGCGCATTCGCTCGGAACCTCTACCTCCCCCTGTGTGCGCCCAACCGTGCAACGACAAAA
GCTTATTATGCGCTCGTTAAAGATCGCGAACGTCGAGTAACGCAAGCGAAGACGATCCTC
CGACTCGATGATGCGACGGATGAAACATCGGGAGGAAAATTTAAAACCGTTGATTTGTTG
GCAGATATGAGGGCTAGATACGACTACAAGGTGTTCAGGTCACGCTTCAACGCTTTATTC
ACGTGGTCCACCTTCCTACGCTCATTGGTCCCCTACAGGAGGACGGGGAACGATCGCGTA
TTGCGCCCTGCTATTCGAATAAAGCGGCCATATTATGACGTCACAATACCTAGTGCAAAA
CGTCACAAACCAAACGATTCAACGATCGACAATGAATCTTCTGTTTAACTATTATGACGT
CATAATTATTATGTATTCACGAACATTTTTTATGTGACGTCATA
| PANTHER |
SNAPC4 (IPR031282) - T[45-499] 1.7E-64 |
| ProSiteProfiles |
Myb-like_dom (IPR017877) - T[295-347] 8.339 - T[403-453] 7.619 |
| SMART |
SANT/Myb (IPR001005) - T[299-349] 5.8E-8 - T[352-404] 8.6E-10 - T[407-457] 1.0E-5 - T[459-507] 3.1E-16 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[300-364] 9.31E-13 - T[348-407] 6.94E-9 - T[407-501] 5.86E-21 |
| CDD |
SANT/Myb (IPR001005) - T[302-347] 1.37161E-6 - T[355-402] 2.97962E-6 - T[462-505] 2.51203E-12 |
| ProSiteProfiles |
Myb_dom (IPR017930) - T[348-406] 16.455 - T[455-509] 18.711 |
| Pfam |
SANT/Myb (IPR001005) - T[408-454] 4.8E-6 - T[460-504] 7.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYB_HUMAN | 29.412 % | 84 | 1.7E-16 |
| MYBA_HUMAN | 28.662 % | 86.3 | 3.72E-17 |
| SNPC4_HUMAN | 33.408 % | 212 | 1.76E-56 |