- Transcript 'KH2012:KH.C7.477.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.477.v1.C.nonSL5-1
Possible name(s)
MYB; MYBL1; SNAPC4
Gene model
Location
KhC7 [5,876,151 / 5,884,704]
Amino acid sequence
Length: 921
>KH.C7.477.v1.C.nonSL5-1
VCFLPCCKVNYFKLQNNFMDFRSSDEEIAEDQLRLQLQTFPLDLNFEEEESDDNEDINET
FEPTSPQPTTTFDAVSQSGEDTQEDDETEEEVIDLSVDLPPTPVNLLKLNLAYQEVIEQE
ITKVKQLLQENHCQTSILIESEQRMNIKSRYKMIVPGYSFMRTPFFKDKEGNGPTNIEIT
RRASDVGELFERNAMPPGKWKKPTLQALISGVEREARRHVTEPLLSKLEYLNDMLNGPDH
EEVKQKISEVQKQIDEKSKVPITGLLGDREREWDWDTIANIDLDMQATPANCACYWKSHL
HPSINNDAWSKAEEKNFTSILEKHTDRDWNWISKELNTGRTPLQCAQYYQRTLNKDFKRK
PWTPEEDQQLVKCIHRLKVGNCIPYTMVALNLNSRTNYQVVHRWSKTLDPFYKKTRWEPE
EDGALLRAVSIYGEKWARIRDLNIVPNRHDGQLRERYKNCLSNWKRGPWIKSEDRKLLKL
VHEHGERWSLVARYMGGRTDSQCVKRFNTIKRAVSMGRALIYNPSTTYSNNVHKIRKTLL
EKISAETTPVKTEKDNDNDKNKDKENGDDGPPEPDAPTDTPHKHLIKISSKPKQKVLPAQ
DALLNMSSNLSSREVLELYIELMKTRRGRRGGKMGIAGKMNHEDIQINFELKKFLEERYK
PMKRQSRKLENDNLGFCLKEITKNSKSISSKDIFIYYIKALNINAARALESIRIKKDKQR
EGKVTLRSVLRNEIEAGNKAVGEMRKKMSKRNADSLTSSDITSDNTDITKQQSTSNKADS
DVTNKSRAFARNLYLPLCAPNRATTKAYYALVKDRERRVTQAKTILRLDDATDETSGGKF
KTVDLLADMRARYDYKVFRSRFNALFTWSTFLRSLVPYRRTGNDRVLRPAIRIKRPYYDV
TIPSAKRHKPNDSTIDNESSV
Nucleotide sequence
Length: 2,822
>KH2012:KH.C7.477.v1.C.nonSL5-1
GTGTGTTTCTTGCCGTGTTGTAAAGTCAATTATTTTAAGCTTCAAAACAATTTTATGGAT
TTTAGAAGCAGTGATGAAGAAATTGCGGAAGATCAGCTTCGATTGCAACTGCAAACGTTT
CCACTCGACCTTAATTTCGAAGAAGAAGAGAGCGATGACAATGAAGATATAAATGAGACG
TTTGAACCAACTTCACCCCAACCTACAACAACATTCGATGCCGTCAGCCAATCAGGTGAA
GACACGCAAGAAGATGATGAAACGGAGGAGGAGGTCATCGACCTCTCAGTTGACCTCCCC
CCGACCCCCGTTAACTTGTTAAAACTAAACCTAGCGTACCAAGAAGTTATCGAACAAGAG
ATAACGAAGGTGAAACAATTGTTGCAGGAAAATCATTGCCAAACTTCCATATTGATCGAG
TCGGAGCAACGAATGAACATTAAAAGTCGTTACAAGATGATTGTGCCCGGTTATTCGTTC
ATGAGGACCCCGTTTTTTAAGGATAAGGAAGGTAACGGTCCAACGAATATCGAGATAACT
CGTCGCGCTTCAGATGTCGGTGAATTATTCGAGCGTAACGCCATGCCCCCGGGAAAGTGG
AAGAAACCAACGCTTCAAGCGTTAATCAGTGGAGTGGAACGTGAAGCGCGACGTCATGTG
ACCGAACCTTTGTTGTCGAAACTTGAATATTTGAACGACATGTTAAACGGACCCGACCAT
GAGGAAGTCAAACAGAAAATTTCCGAAGTTCAGAAACAAATTGATGAAAAAAGTAAAGTC
CCAATAACTGGGTTGTTGGGCGATCGTGAGCGCGAGTGGGATTGGGACACGATAGCCAAC
ATAGACCTGGATATGCAAGCTACTCCGGCTAACTGTGCGTGTTACTGGAAGTCCCATCTT
CATCCGTCTATTAACAATGATGCCTGGAGCAAAGCAGAAGAAAAGAACTTCACATCAATA
CTTGAGAAACACACAGACCGAGATTGGAACTGGATATCGAAGGAGTTAAACACGGGACGT
ACCCCGTTACAATGTGCACAGTATTACCAAAGAACGCTCAACAAGGACTTCAAAAGGAAG
CCCTGGACACCAGAAGAAGACCAGCAATTGGTGAAATGCATCCATAGATTAAAAGTCGGG
AATTGCATCCCGTACACAATGGTTGCATTAAACCTCAACTCACGAACAAACTACCAAGTC
GTCCATCGATGGTCAAAAACGCTCGACCCCTTCTATAAAAAAACAAGATGGGAGCCAGAA
GAAGACGGGGCATTGTTGCGAGCGGTTAGCATATATGGGGAAAAGTGGGCAAGAATACGT
GACCTTAATATTGTTCCTAATCGACATGATGGTCAACTGAGGGAAAGATATAAGAACTGC
CTCAGCAACTGGAAGCGCGGCCCATGGATCAAATCAGAGGATCGCAAACTATTAAAGCTC
GTACACGAGCATGGGGAACGGTGGTCGTTGGTTGCGAGGTACATGGGGGGGAGGACGGAC
TCGCAATGCGTGAAGAGATTTAATACGATTAAACGAGCTGTAAGCATGGGCCGTGCATTA
ATCTACAATCCTTCTACCACGTATTCAAATAATGTTCACAAGATTCGGAAAACTTTGTTG
GAAAAAATATCCGCTGAGACAACCCCGGTTAAAACAGAAAAAGACAACGACAACGATAAA
AATAAAGATAAAGAAAATGGTGATGATGGTCCACCAGAGCCAGATGCACCTACAGATACA
CCACACAAACATCTTATAAAAATATCTTCGAAACCGAAACAAAAAGTTTTGCCGGCACAG
GACGCTCTTCTGAATATGTCCAGCAACTTATCGAGCCGCGAGGTGTTGGAATTATACATT
GAATTGATGAAGACCAGACGTGGTAGAAGAGGGGGCAAGATGGGAATAGCGGGGAAGATG
AATCACGAGGATATTCAGATCAATTTTGAACTTAAGAAGTTTTTAGAGGAGAGGTACAAA
CCAATGAAACGACAATCGCGGAAACTCGAAAACGACAATCTCGGATTTTGTTTGAAAGAA
ATCACCAAGAATTCAAAATCGATTTCGTCCAAAGATATTTTTATTTATTATATAAAAGCT
CTAAACATCAACGCAGCTCGAGCTCTAGAATCGATTCGTATCAAGAAAGATAAACAACGA
GAGGGAAAAGTGACCTTGAGGTCGGTGCTACGGAACGAGATCGAGGCGGGAAACAAAGCT
GTTGGTGAAATGAGGAAAAAAATGAGTAAACGAAATGCTGACTCATTAACCTCCAGTGAC
ATCACAAGTGACAACACTGACATCACAAAACAACAATCGACGAGTAACAAAGCCGATAGT
GATGTCACAAACAAATCTCGCGCATTCGCTCGGAACCTCTACCTCCCCCTGTGTGCGCCC
AACCGTGCAACGACAAAAGCTTATTATGCGCTCGTTAAAGATCGCGAACGTCGAGTAACG
CAAGCGAAGACGATCCTCCGACTCGATGATGCGACGGATGAAACATCGGGAGGAAAATTT
AAAACCGTTGATTTGTTGGCAGATATGAGGGCTAGATACGACTACAAGGTGTTCAGGTCA
CGCTTCAACGCTTTATTCACGTGGTCCACCTTCCTACGCTCATTGGTCCCCTACAGGAGG
ACGGGGAACGATCGCGTATTGCGCCCTGCTATTCGAATAAAGCGGCCATATTATGACGTC
ACAATACCTAGTGCAAAACGTCACAAACCAAACGATTCAACGATCGACAATGAATCTTCT
GTTTAACTATTATGACGTCATAATTATTATGTATTCACGAACATTTTTTATGTGACGTCA
TA
| PANTHER |
SNAPC4 (IPR031282) - T[51-504] 1.3E-64 |
| ProSiteProfiles |
Myb-like_dom (IPR017877) - T[301-353] 8.339 - T[409-459] 7.619 |
| SMART |
SANT/Myb (IPR001005) - T[305-355] 5.8E-8 - T[358-410] 8.6E-10 - T[413-463] 1.0E-5 - T[465-513] 3.1E-16 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[306-370] 9.31E-13 - T[354-413] 7.02E-9 - T[413-507] 5.86E-21 |
| CDD |
SANT/Myb (IPR001005) - T[308-353] 1.32745E-6 - T[361-408] 2.79992E-6 - T[468-511] 2.33834E-12 |
| ProSiteProfiles |
Myb_dom (IPR017930) - T[354-412] 16.455 - T[461-515] 18.711 |
| Pfam |
SANT/Myb (IPR001005) - T[414-460] 4.9E-6 - T[466-510] 7.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYB_HUMAN | 29.412 % | 84 | 1.54E-16 |
| MYBA_HUMAN | 28.662 % | 86.3 | 3.45E-17 |
| SNPC4_HUMAN | 33.408 % | 212 | 1.48E-56 |