- Transcript 'Cisavi.CG.ENS81.R143...' >
- Transcript 'KH2012:KH.C10.558.v1...' >
- Transcript 'Boleac.CG.SB_v3.S746...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C7.477.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.477.v1.C.nonSL4-1
Possible name(s)
MYB; MYBL1; SNAPC4
Gene model
Location
KhC7 [5,876,151 / 5,884,661]
Amino acid sequence
Length: 906
>KH.C7.477.v1.C.nonSL4-1
NNFMDFRSSDEEIAEDQLRLQLQTFPLDLNFEEEESDDNEDINETFEPTSPQPTTTFDAV
SQSGEDTQEDDETEEEVIDLSVDLPPTPVNLLKLNLAYQEVIEQEITKVKQLLQENHCQT
SILIESEQRMNIKSRYKMIVPGYSFMRTPFFKDKEGNGPTNIEITRRASDVGELFERNAM
PPGKWKKPTLQALISGVEREARRHVTEPLLSKLEYLNDMLNGPDHEEVKQKISEVQKQID
EKSKVPITGLLGDREREWDWDTIANIDLDMQATPANCACYWKSHLHPSINNDAWSKAEEK
NFTSILEKHTDRDWNWISKELNTGRTPLQCAQYYQRTLNKDFKRKPWTPEEDQQLVKCIH
RLKVGNCIPYTMVALNLNSRTNYQVVHRWSKTLDPFYKKTRWEPEEDGALLRAVSIYGEK
WARIRDLNIVPNRHDGQLRERYKNCLSNWKRGPWIKSEDRKLLKLVHEHGERWSLVARYM
GGRTDSQCVKRFNTIKRAVSMGRALIYNPSTTYSNNVHKIRKTLLEKISAETTPVKTEKD
NDNDKNKDKENGDDGPPEPDAPTDTPHKHLIKISSKPKQKVLPAQDALLNMSSNLSSREV
LELYIELMKTRRGRRGGKMGIAGKMNHEDIQINFELKKFLEERYKPMKRQSRKLENDNLG
FCLKEITKNSKSISSKDIFIYYIKALNINAARALESIRIKKDKQREGKVTLRSVLRNEIE
AGNKAVGEMRKKMSKRNADSLTSSDITSDNTDITKQQSTSNKADSDVTNKSRAFARNLYL
PLCAPNRATTKAYYALVKDRERRVTQAKTILRLDDATDETSGGKFKTVDLLADMRARYDY
KVFRSRFNALFTWSTFLRSLVPYRRTGNDRVLRPAIRIKRPYYDVTIPSAKRHKPNDSTI
DNESSV
Nucleotide sequence
Length: 2,779
>KH2012:KH.C7.477.v1.C.nonSL4-1
AAAACAATTTTATGGATTTTAGAAGCAGTGATGAAGAAATTGCGGAAGATCAGCTTCGAT
TGCAACTGCAAACGTTTCCACTCGACCTTAATTTCGAAGAAGAAGAGAGCGATGACAATG
AAGATATAAATGAGACGTTTGAACCAACTTCACCCCAACCTACAACAACATTCGATGCCG
TCAGCCAATCAGGTGAAGACACGCAAGAAGATGATGAAACGGAGGAGGAGGTCATCGACC
TCTCAGTTGACCTCCCCCCGACCCCCGTTAACTTGTTAAAACTAAACCTAGCGTACCAAG
AAGTTATCGAACAAGAGATAACGAAGGTGAAACAATTGTTGCAGGAAAATCATTGCCAAA
CTTCCATATTGATCGAGTCGGAGCAACGAATGAACATTAAAAGTCGTTACAAGATGATTG
TGCCCGGTTATTCGTTCATGAGGACCCCGTTTTTTAAGGATAAGGAAGGTAACGGTCCAA
CGAATATCGAGATAACTCGTCGCGCTTCAGATGTCGGTGAATTATTCGAGCGTAACGCCA
TGCCCCCGGGAAAGTGGAAGAAACCAACGCTTCAAGCGTTAATCAGTGGAGTGGAACGTG
AAGCGCGACGTCATGTGACCGAACCTTTGTTGTCGAAACTTGAATATTTGAACGACATGT
TAAACGGACCCGACCATGAGGAAGTCAAACAGAAAATTTCCGAAGTTCAGAAACAAATTG
ATGAAAAAAGTAAAGTCCCAATAACTGGGTTGTTGGGCGATCGTGAGCGCGAGTGGGATT
GGGACACGATAGCCAACATAGACCTGGATATGCAAGCTACTCCGGCTAACTGTGCGTGTT
ACTGGAAGTCCCATCTTCATCCGTCTATTAACAATGATGCCTGGAGCAAAGCAGAAGAAA
AGAACTTCACATCAATACTTGAGAAACACACAGACCGAGATTGGAACTGGATATCGAAGG
AGTTAAACACGGGACGTACCCCGTTACAATGTGCACAGTATTACCAAAGAACGCTCAACA
AGGACTTCAAAAGGAAGCCCTGGACACCAGAAGAAGACCAGCAATTGGTGAAATGCATCC
ATAGATTAAAAGTCGGGAATTGCATCCCGTACACAATGGTTGCATTAAACCTCAACTCAC
GAACAAACTACCAAGTCGTCCATCGATGGTCAAAAACGCTCGACCCCTTCTATAAAAAAA
CAAGATGGGAGCCAGAAGAAGACGGGGCATTGTTGCGAGCGGTTAGCATATATGGGGAAA
AGTGGGCAAGAATACGTGACCTTAATATTGTTCCTAATCGACATGATGGTCAACTGAGGG
AAAGATATAAGAACTGCCTCAGCAACTGGAAGCGCGGCCCATGGATCAAATCAGAGGATC
GCAAACTATTAAAGCTCGTACACGAGCATGGGGAACGGTGGTCGTTGGTTGCGAGGTACA
TGGGGGGGAGGACGGACTCGCAATGCGTGAAGAGATTTAATACGATTAAACGAGCTGTAA
GCATGGGCCGTGCATTAATCTACAATCCTTCTACCACGTATTCAAATAATGTTCACAAGA
TTCGGAAAACTTTGTTGGAAAAAATATCCGCTGAGACAACCCCGGTTAAAACAGAAAAAG
ACAACGACAACGATAAAAATAAAGATAAAGAAAATGGTGATGATGGTCCACCAGAGCCAG
ATGCACCTACAGATACACCACACAAACATCTTATAAAAATATCTTCGAAACCGAAACAAA
AAGTTTTGCCGGCACAGGACGCTCTTCTGAATATGTCCAGCAACTTATCGAGCCGCGAGG
TGTTGGAATTATACATTGAATTGATGAAGACCAGACGTGGTAGAAGAGGGGGCAAGATGG
GAATAGCGGGGAAGATGAATCACGAGGATATTCAGATCAATTTTGAACTTAAGAAGTTTT
TAGAGGAGAGGTACAAACCAATGAAACGACAATCGCGGAAACTCGAAAACGACAATCTCG
GATTTTGTTTGAAAGAAATCACCAAGAATTCAAAATCGATTTCGTCCAAAGATATTTTTA
TTTATTATATAAAAGCTCTAAACATCAACGCAGCTCGAGCTCTAGAATCGATTCGTATCA
AGAAAGATAAACAACGAGAGGGAAAAGTGACCTTGAGGTCGGTGCTACGGAACGAGATCG
AGGCGGGAAACAAAGCTGTTGGTGAAATGAGGAAAAAAATGAGTAAACGAAATGCTGACT
CATTAACCTCCAGTGACATCACAAGTGACAACACTGACATCACAAAACAACAATCGACGA
GTAACAAAGCCGATAGTGATGTCACAAACAAATCTCGCGCATTCGCTCGGAACCTCTACC
TCCCCCTGTGTGCGCCCAACCGTGCAACGACAAAAGCTTATTATGCGCTCGTTAAAGATC
GCGAACGTCGAGTAACGCAAGCGAAGACGATCCTCCGACTCGATGATGCGACGGATGAAA
CATCGGGAGGAAAATTTAAAACCGTTGATTTGTTGGCAGATATGAGGGCTAGATACGACT
ACAAGGTGTTCAGGTCACGCTTCAACGCTTTATTCACGTGGTCCACCTTCCTACGCTCAT
TGGTCCCCTACAGGAGGACGGGGAACGATCGCGTATTGCGCCCTGCTATTCGAATAAAGC
GGCCATATTATGACGTCACAATACCTAGTGCAAAACGTCACAAACCAAACGATTCAACGA
TCGACAATGAATCTTCTGTTTAACTATTATGACGTCATAATTATTATGTATTCACGAACA
TTTTTTATGTGACGTCATA
| PANTHER |
SNAPC4 (IPR031282) - T[36-490] 1.6E-64 |
| ProSiteProfiles |
Myb-like_dom (IPR017877) - T[286-338] 8.339 - T[394-444] 7.619 |
| SMART |
SANT/Myb (IPR001005) - T[290-340] 5.8E-8 - T[343-395] 8.6E-10 - T[398-448] 1.0E-5 - T[450-498] 3.1E-16 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[291-355] 9.97E-13 - T[339-398] 6.86E-9 - T[398-492] 5.86E-21 |
| CDD |
SANT/Myb (IPR001005) - T[293-338] 1.33168E-6 - T[346-393] 2.89285E-6 - T[453-496] 2.41549E-12 |
| ProSiteProfiles |
Myb_dom (IPR017930) - T[339-397] 16.455 - T[446-500] 18.711 |
| Pfam |
SANT/Myb (IPR001005) - T[399-445] 4.8E-6 - T[451-495] 7.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYB_HUMAN | 29.412 % | 83.6 | 1.81E-16 |
| MYBA_HUMAN | 28.662 % | 85.9 | 4.28E-17 |
| SNPC4_HUMAN | 33.408 % | 212 | 1.24E-56 |