- Transcript 'KH2012:KH.C7.477.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.477.v1.C.nonSL3-1
Possible name(s)
MYB; MYBL1; SNAPC4
Gene model
Location
KhC7 [5,876,151 / 5,884,641]
Amino acid sequence
Length: 900
>KH.C7.477.v1.C.nonSL3-1
RSSDEEIAEDQLRLQLQTFPLDLNFEEEESDDNEDINETFEPTSPQPTTTFDAVSQSGED
TQEDDETEEEVIDLSVDLPPTPVNLLKLNLAYQEVIEQEITKVKQLLQENHCQTSILIES
EQRMNIKSRYKMIVPGYSFMRTPFFKDKEGNGPTNIEITRRASDVGELFERNAMPPGKWK
KPTLQALISGVEREARRHVTEPLLSKLEYLNDMLNGPDHEEVKQKISEVQKQIDEKSKVP
ITGLLGDREREWDWDTIANIDLDMQATPANCACYWKSHLHPSINNDAWSKAEEKNFTSIL
EKHTDRDWNWISKELNTGRTPLQCAQYYQRTLNKDFKRKPWTPEEDQQLVKCIHRLKVGN
CIPYTMVALNLNSRTNYQVVHRWSKTLDPFYKKTRWEPEEDGALLRAVSIYGEKWARIRD
LNIVPNRHDGQLRERYKNCLSNWKRGPWIKSEDRKLLKLVHEHGERWSLVARYMGGRTDS
QCVKRFNTIKRAVSMGRALIYNPSTTYSNNVHKIRKTLLEKISAETTPVKTEKDNDNDKN
KDKENGDDGPPEPDAPTDTPHKHLIKISSKPKQKVLPAQDALLNMSSNLSSREVLELYIE
LMKTRRGRRGGKMGIAGKMNHEDIQINFELKKFLEERYKPMKRQSRKLENDNLGFCLKEI
TKNSKSISSKDIFIYYIKALNINAARALESIRIKKDKQREGKVTLRSVLRNEIEAGNKAV
GEMRKKMSKRNADSLTSSDITSDNTDITKQQSTSNKADSDVTNKSRAFARNLYLPLCAPN
RATTKAYYALVKDRERRVTQAKTILRLDDATDETSGGKFKTVDLLADMRARYDYKVFRSR
FNALFTWSTFLRSLVPYRRTGNDRVLRPAIRIKRPYYDVTIPSAKRHKPNDSTIDNESSV
Nucleotide sequence
Length: 2,759
>KH2012:KH.C7.477.v1.C.nonSL3-1
AGAAGCAGTGATGAAGAAATTGCGGAAGATCAGCTTCGATTGCAACTGCAAACGTTTCCA
CTCGACCTTAATTTCGAAGAAGAAGAGAGCGATGACAATGAAGATATAAATGAGACGTTT
GAACCAACTTCACCCCAACCTACAACAACATTCGATGCCGTCAGCCAATCAGGTGAAGAC
ACGCAAGAAGATGATGAAACGGAGGAGGAGGTCATCGACCTCTCAGTTGACCTCCCCCCG
ACCCCCGTTAACTTGTTAAAACTAAACCTAGCGTACCAAGAAGTTATCGAACAAGAGATA
ACGAAGGTGAAACAATTGTTGCAGGAAAATCATTGCCAAACTTCCATATTGATCGAGTCG
GAGCAACGAATGAACATTAAAAGTCGTTACAAGATGATTGTGCCCGGTTATTCGTTCATG
AGGACCCCGTTTTTTAAGGATAAGGAAGGTAACGGTCCAACGAATATCGAGATAACTCGT
CGCGCTTCAGATGTCGGTGAATTATTCGAGCGTAACGCCATGCCCCCGGGAAAGTGGAAG
AAACCAACGCTTCAAGCGTTAATCAGTGGAGTGGAACGTGAAGCGCGACGTCATGTGACC
GAACCTTTGTTGTCGAAACTTGAATATTTGAACGACATGTTAAACGGACCCGACCATGAG
GAAGTCAAACAGAAAATTTCCGAAGTTCAGAAACAAATTGATGAAAAAAGTAAAGTCCCA
ATAACTGGGTTGTTGGGCGATCGTGAGCGCGAGTGGGATTGGGACACGATAGCCAACATA
GACCTGGATATGCAAGCTACTCCGGCTAACTGTGCGTGTTACTGGAAGTCCCATCTTCAT
CCGTCTATTAACAATGATGCCTGGAGCAAAGCAGAAGAAAAGAACTTCACATCAATACTT
GAGAAACACACAGACCGAGATTGGAACTGGATATCGAAGGAGTTAAACACGGGACGTACC
CCGTTACAATGTGCACAGTATTACCAAAGAACGCTCAACAAGGACTTCAAAAGGAAGCCC
TGGACACCAGAAGAAGACCAGCAATTGGTGAAATGCATCCATAGATTAAAAGTCGGGAAT
TGCATCCCGTACACAATGGTTGCATTAAACCTCAACTCACGAACAAACTACCAAGTCGTC
CATCGATGGTCAAAAACGCTCGACCCCTTCTATAAAAAAACAAGATGGGAGCCAGAAGAA
GACGGGGCATTGTTGCGAGCGGTTAGCATATATGGGGAAAAGTGGGCAAGAATACGTGAC
CTTAATATTGTTCCTAATCGACATGATGGTCAACTGAGGGAAAGATATAAGAACTGCCTC
AGCAACTGGAAGCGCGGCCCATGGATCAAATCAGAGGATCGCAAACTATTAAAGCTCGTA
CACGAGCATGGGGAACGGTGGTCGTTGGTTGCGAGGTACATGGGGGGGAGGACGGACTCG
CAATGCGTGAAGAGATTTAATACGATTAAACGAGCTGTAAGCATGGGCCGTGCATTAATC
TACAATCCTTCTACCACGTATTCAAATAATGTTCACAAGATTCGGAAAACTTTGTTGGAA
AAAATATCCGCTGAGACAACCCCGGTTAAAACAGAAAAAGACAACGACAACGATAAAAAT
AAAGATAAAGAAAATGGTGATGATGGTCCACCAGAGCCAGATGCACCTACAGATACACCA
CACAAACATCTTATAAAAATATCTTCGAAACCGAAACAAAAAGTTTTGCCGGCACAGGAC
GCTCTTCTGAATATGTCCAGCAACTTATCGAGCCGCGAGGTGTTGGAATTATACATTGAA
TTGATGAAGACCAGACGTGGTAGAAGAGGGGGCAAGATGGGAATAGCGGGGAAGATGAAT
CACGAGGATATTCAGATCAATTTTGAACTTAAGAAGTTTTTAGAGGAGAGGTACAAACCA
ATGAAACGACAATCGCGGAAACTCGAAAACGACAATCTCGGATTTTGTTTGAAAGAAATC
ACCAAGAATTCAAAATCGATTTCGTCCAAAGATATTTTTATTTATTATATAAAAGCTCTA
AACATCAACGCAGCTCGAGCTCTAGAATCGATTCGTATCAAGAAAGATAAACAACGAGAG
GGAAAAGTGACCTTGAGGTCGGTGCTACGGAACGAGATCGAGGCGGGAAACAAAGCTGTT
GGTGAAATGAGGAAAAAAATGAGTAAACGAAATGCTGACTCATTAACCTCCAGTGACATC
ACAAGTGACAACACTGACATCACAAAACAACAATCGACGAGTAACAAAGCCGATAGTGAT
GTCACAAACAAATCTCGCGCATTCGCTCGGAACCTCTACCTCCCCCTGTGTGCGCCCAAC
CGTGCAACGACAAAAGCTTATTATGCGCTCGTTAAAGATCGCGAACGTCGAGTAACGCAA
GCGAAGACGATCCTCCGACTCGATGATGCGACGGATGAAACATCGGGAGGAAAATTTAAA
ACCGTTGATTTGTTGGCAGATATGAGGGCTAGATACGACTACAAGGTGTTCAGGTCACGC
TTCAACGCTTTATTCACGTGGTCCACCTTCCTACGCTCATTGGTCCCCTACAGGAGGACG
GGGAACGATCGCGTATTGCGCCCTGCTATTCGAATAAAGCGGCCATATTATGACGTCACA
ATACCTAGTGCAAAACGTCACAAACCAAACGATTCAACGATCGACAATGAATCTTCTGTT
TAACTATTATGACGTCATAATTATTATGTATTCACGAACATTTTTTATGTGACGTCATA
| PANTHER |
SNAPC4 (IPR031282) - T[30-484] 1.5E-64 |
| ProSiteProfiles |
Myb-like_dom (IPR017877) - T[280-332] 8.339 - T[388-438] 7.619 |
| SMART |
SANT/Myb (IPR001005) - T[284-334] 5.8E-8 - T[337-389] 8.6E-10 - T[392-442] 1.0E-5 - T[444-492] 3.1E-16 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[285-349] 9.97E-13 - T[333-392] 6.79E-9 - T[392-486] 5.47E-21 |
| CDD |
SANT/Myb (IPR001005) - T[287-332] 1.37582E-6 - T[340-387] 3.01829E-6 - T[447-490] 2.54442E-12 |
| ProSiteProfiles |
Myb_dom (IPR017930) - T[333-391] 16.455 - T[440-494] 18.711 |
| Pfam |
SANT/Myb (IPR001005) - T[393-439] 4.8E-6 - T[445-489] 7.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYB_HUMAN | 29.412 % | 83.6 | 2.0E-16 |
| MYBA_HUMAN | 28.662 % | 85.9 | 4.19E-17 |
| SNPC4_HUMAN | 33.408 % | 213 | 8.54E-57 |