- Region 'REG00000075' >
- Transcript 'Cisavi.CG.ENS81.R2.3...' >
- Molecular Tool 'Omeprazole' >
- EST 'AHC0AAA234YK19_RM1' >
- Transcript 'KH2012:KH.C7.472.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.472.v1.A.SL1-1
Possible name(s)
HOXB13; HOXC12; HOXD12
Gene model
Location
KhC7 [2,706,848 / 2,709,180]
Amino acid sequence
Length: 486
>KH.C7.472.v1.A.SL1-1
IPMTAKVFSGDYHYNMSFAFGDTTSEQEADSLFSSAGPSQENITQPEEPLQVPAKVTSCS
SVHVTEQLAYFNPMRVNDSYPMSEHVPSYGRDVSQQPLKKWESYSAKGLTPTLATPAAKT
DVQQSTYAAMPKNGKPAPSSLTEACGVLRGSEYERSTIPYYGTSAHVRQNIGKSDNGIVS
ALRTSPIIRSPIVTERENGRSLSTSGSDSGAHGNLVQSAPPRTISDLPNLNSGYPSTDNP
FRCLPDSGDAFKGLTACGSMLSQSTCQEQRYTLPHSTIHTEHPFDHPGHSSMSVTYANDS
LYFGSMDHYGSQLSARQYPQFVTHPYYPHYPAPSLHHTDFATSTIPNQVVAHDHVALLPH
HHHPAAAAYSHPYQTVLPGQHYPVDVTRHGAQRRRRRPYTKYQLSELEREFGANEFISRE
MREQIAVRVGLNDRQVKIWFQNRRMKKKRMQHRGEQSVEDEDQLGMTEEPDLQLGAVPHC
ENYMTG
Nucleotide sequence
Length: 1,888
>KH2012:KH.C7.472.v1.A.SL1-1
TTTGCTGGTTTAGGTTTTCAGTTTTAAATATTTAGTCTGTTGAATCCCTATGACAGCAAA
GGTTTTTAGCGGCGACTATCACTACAATATGAGTTTTGCATTCGGAGACACTACATCCGA
ACAAGAAGCGGACTCTCTCTTTTCCTCCGCAGGACCGAGCCAAGAAAACATCACTCAGCC
GGAAGAGCCCCTTCAAGTTCCGGCCAAAGTTACATCTTGCTCATCGGTGCATGTAACGGA
GCAACTGGCTTATTTCAACCCAATGCGAGTCAACGATTCTTACCCGATGTCTGAACACGT
TCCAAGTTACGGTAGAGACGTCTCGCAGCAACCTTTGAAGAAATGGGAGTCCTATAGCGC
CAAGGGCCTGACTCCCACACTGGCGACACCTGCTGCTAAAACCGATGTACAGCAGTCTAC
ATACGCAGCCATGCCAAAGAACGGTAAACCAGCCCCCAGTTCTCTAACAGAAGCATGCGG
TGTTTTAAGAGGCAGTGAATATGAGCGCTCAACCATCCCATACTACGGTACCTCTGCTCA
CGTCCGGCAAAACATTGGAAAAAGCGACAACGGCATCGTCTCAGCTCTCCGCACGTCTCC
CATAATTCGTTCGCCGATCGTCACCGAAAGAGAAAATGGCCGCTCGCTATCGACTTCAGG
TTCAGACTCCGGCGCCCACGGGAATCTGGTGCAGTCGGCGCCGCCGAGAACAATCTCGGA
TCTCCCCAACCTGAACAGCGGTTACCCGTCGACCGACAACCCATTTCGTTGCTTACCTGA
TAGCGGTGATGCTTTCAAAGGCCTTACTGCATGCGGTAGTATGTTAAGTCAATCAACCTG
TCAGGAACAAAGATACACCCTTCCACATTCAACCATCCATACTGAACATCCGTTCGACCA
CCCCGGCCACTCTAGCATGTCCGTTACATACGCCAACGACAGTTTATATTTTGGTTCAAT
GGATCATTACGGCTCACAGCTAAGCGCGAGGCAGTACCCTCAATTCGTCACCCACCCTTA
CTACCCCCATTACCCAGCTCCTTCATTACATCATACAGATTTTGCAACTTCCACAATTCC
AAATCAAGTTGTAGCTCACGACCATGTAGCACTACTACCACACCACCATCATCCAGCTGC
AGCAGCCTACAGTCATCCATACCAAACTGTTCTTCCTGGTCAGCATTACCCAGTAGATGT
TACAAGACATGGAGCCCAGAGAAGGCGTCGAAGGCCATACACTAAGTACCAACTTTCCGA
GCTAGAAAGAGAGTTCGGAGCGAACGAATTCATAAGCCGAGAAATGCGAGAACAAATTGC
CGTTAGAGTGGGCTTGAACGACCGGCAAGTTAAAATCTGGTTCCAAAACCGAAGGATGAA
GAAAAAGAGAATGCAGCACCGTGGGGAGCAGTCTGTAGAGGACGAAGATCAACTAGGGAT
GACAGAAGAGCCCGATCTTCAGTTAGGTGCGGTTCCTCACTGTGAGAATTACATGACGGG
CTAGCGGCTTGATTCATATCATGATATTCTTTCATATTCATCGTGAATTTTCACGAGCGG
AGTCATCGCGCCGGTACAGAGGCCAGCAGCAGCAGTAATGGGGTGGGAGAACGCCTCCGC
TGTAACTATGAGGAAATTCCAACTTTGTATTCGTGTAAAACCATATTGCACCTTCAAGCC
ATAACAAATGTTCGTACTATAGCAAAAAAGCCAAACTCGCAAAACACATTCATTTCTTTT
CTTTTCATTTCTATAGTGCATTTCTTTGGTACAGCTCATTAGAGTGTATACATTATTATG
CAATAATGCGCTTTATTTGTTAAGTGCAGTTTTGTTTTCTAGCACTTAGCCTTCATTCAT
GCTCATTTGTTAATAAATCATTGCCAGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[371-451] 9.41E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[390-450] 20.374 |
| SMART |
Homeobox_dom (IPR001356) - T[392-454] 2.7E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[393-449] 1.3E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[399-451] 2.48756E-20 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[425-448] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXC12_HUMAN | 53.247 % | 87.8 | 2.61E-19 |
| HXD12_HUMAN | 57.971 % | 90.1 | 3.3E-20 |
| HXB13_HUMAN | 45 % | 81.3 | 4.03E-17 |