- Transcript 'KH2012:KH.C7.212.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.212.v1.R.ND1-1
Possible name(s)
MCCC1; PC; PCCA
Gene model
Location
KhC7 [5,729,944 / 5,738,952]
Amino acid sequence
Length: 739
>KH.C7.212.v1.R.ND1-1
DCYVKNKMLQITRTAIFSRFRWRRVRNSAECVNFVPNYRRYSSHPVEINENVKETQISKL
LIANRGEIACRVMKTAKNMGISTVAVYSEVDRSQMHVQMADEAFCIGDEQGYLGMDGILN
VAKDAGAEAIHPGYGFLSENAEFAELCSSNGVIFVGPPPSAIRDMGIKSTSKRIMSAANV
PIIEGYHGDEQSDSRLLEEADRIGFPVMIKAVRGGGGKGMRIATSRDVFLEQLSSARSEA
IKSFGDDVMLVEKYVDRPRHVEVQVFGDHHGNAVHLFERDCSVQRRHQKVIEESPAPGIS
LRTRTNLGEAAVRAARAVGYVGAGTVEFVMDPQQNFYFMEMNTRLQVEHPVTEMVTGTDL
VEWQLLVAQGHPLPSTQQEICDRTRGHAFEARIYAEDPDDDFMPRAGPLIHLSAPKVTPN
TRVETGVRQGDVVSHYYDPMIAKLVVWGKDRGSALRGLVRGLGEYSVVGLDTNIKFLQRL
ALHPSFKAGDVHTGFIEQHNEALFPNKPTKISPHAACRAALGYLLLEETPNTQDPFVECS
NFQVNIPSPRTIELTVGDCDVIVVITPLSDGKYSMNVNGDVTNENNDMIVSGSLTKDIMT
SSMNLKTTIDDITTSEKMVFIPGESHVRFSDPDSIHLYPTNGEESLKFSLPLPKYLSEFA
TSGVSGDPMAPMVGEIQKVLVAPGEEVAQGQPLVVMIAMKMEHTIRSPRDGVVESVHVAA
KDNVARFDVLVKLVPEEEE
Nucleotide sequence
Length: 2,444
>KH2012:KH.C7.212.v1.R.ND1-1
GTGATTGTTACGTCAAAAACAAAATGCTGCAAATTACGAGAACAGCGATTTTTAGCCGTT
TTCGGTGGCGTAGAGTCCGTAATAGTGCAGAATGTGTTAATTTTGTGCCAAATTATCGTC
GGTATTCAAGCCACCCAGTTGAAATAAACGAAAATGTCAAAGAAACACAAATTTCAAAAC
TTCTTATCGCGAACCGGGGAGAAATCGCGTGTCGGGTAATGAAGACGGCGAAAAACATGG
GTATTAGCACTGTAGCAGTGTACAGTGAAGTAGATAGATCACAGATGCATGTCCAGATGG
CTGATGAAGCTTTCTGTATTGGAGATGAACAAGGTTACTTAGGAATGGATGGTATATTGA
ATGTAGCGAAAGACGCTGGAGCCGAAGCCATCCACCCAGGTTATGGATTTCTGTCGGAAA
ACGCAGAGTTTGCCGAGTTATGTTCAAGCAATGGAGTCATATTTGTTGGCCCGCCCCCTT
CTGCTATCCGAGACATGGGGATTAAAAGTACTTCGAAGAGAATAATGTCTGCAGCTAATG
TTCCAATTATTGAAGGTTACCATGGTGATGAGCAGTCGGACTCACGCCTCCTTGAAGAAG
CGGATCGGATCGGGTTCCCTGTGATGATAAAAGCTGTAAGAGGAGGTGGAGGGAAGGGAA
TGAGAATCGCAACATCCAGGGATGTCTTCTTGGAGCAATTATCGTCCGCAAGGAGCGAAG
CGATCAAGTCGTTCGGCGACGATGTGATGTTGGTAGAGAAATATGTGGATCGACCGAGGC
ATGTAGAGGTTCAGGTGTTCGGAGACCACCATGGCAACGCTGTCCACTTATTCGAGCGCG
ACTGTAGTGTCCAACGTCGGCATCAGAAAGTTATTGAAGAGTCCCCAGCCCCGGGTATTT
CCCTTCGCACCCGTACCAACCTGGGTGAAGCCGCTGTCCGTGCAGCGAGGGCAGTGGGTT
ACGTCGGGGCAGGGACGGTGGAGTTTGTGATGGACCCCCAACAAAACTTCTACTTCATGG
AGATGAACACGAGGTTACAGGTAGAACACCCAGTCACAGAAATGGTAACAGGGACAGACT
TGGTTGAGTGGCAATTATTGGTAGCACAAGGACATCCTTTACCATCAACCCAGCAAGAAA
TATGCGATCGAACACGAGGTCATGCTTTTGAAGCGAGGATATATGCTGAAGACCCTGACG
ATGACTTCATGCCCCGAGCCGGACCCCTAATCCATCTATCGGCCCCAAAAGTCACCCCGA
ACACCCGCGTCGAGACTGGGGTCCGCCAGGGTGACGTGGTATCCCATTACTACGACCCTA
TGATCGCAAAGCTAGTCGTTTGGGGCAAAGACAGGGGTTCTGCGCTGCGAGGGTTAGTTA
GGGGTCTGGGTGAATATTCTGTGGTTGGATTAGACACAAACATCAAGTTTTTACAACGAC
TTGCTCTTCACCCAAGCTTCAAGGCTGGTGACGTACACACTGGGTTTATTGAACAACACA
ACGAAGCATTGTTTCCAAACAAACCCACGAAAATATCACCTCATGCTGCTTGCCGCGCTG
CACTAGGGTATTTACTTCTAGAAGAAACACCTAACACTCAAGATCCATTTGTAGAATGTT
CCAATTTTCAAGTCAATATCCCGAGTCCGAGAACAATAGAGCTGACAGTGGGTGATTGTG
ATGTCATAGTGGTCATTACTCCCCTTAGTGACGGAAAATACTCAATGAATGTGAATGGTG
ATGTCACAAACGAAAACAATGACATGATTGTCTCGGGTTCGCTAACAAAGGACATTATGA
CATCATCAATGAATTTAAAAACAACCATTGATGACATCACAACCAGCGAGAAAATGGTGT
TTATCCCTGGAGAGTCTCACGTCAGGTTTTCCGACCCAGATTCGATCCATCTTTACCCGA
CAAACGGAGAAGAGTCTTTAAAGTTTTCGCTCCCGTTGCCGAAATACCTCAGCGAGTTTG
CGACATCAGGAGTGTCGGGCGACCCGATGGCCCCCATGGTGGGCGAGATACAGAAGGTGC
TGGTGGCACCCGGTGAAGAGGTGGCTCAAGGGCAACCCCTAGTGGTGATGATAGCGATGA
AGATGGAACACACGATACGCTCGCCACGCGATGGGGTGGTGGAGTCGGTTCACGTCGCAG
CGAAAGATAACGTCGCGCGTTTCGATGTGTTGGTTAAACTTGTGCCAGAAGAAGAAGAAT
AGATTTTATGATGTTATTGTGTCACTTGTGATGTCATATTGTTAATTTATGATGTTGTAT
TGCTATTTAATGATGTCATAATGTTCCTCTATGACACTATTGTGATACATTATGATGTTA
GTGTGATGTTATGAAGAAATTGTGTCACTTTATGATTTGGAACTTGACATTTACTGCATC
AAACTTGGTAAACAGTGATGCAATTACACACATTATGTCTCGTT
| SUPERFAMILY |
PreATP-grasp_dom_sf (IPR016185) - T[48-165] 1.22E-46 |
| ProSiteProfiles |
Biotin_carboxylation_dom (IPR011764) - T[56-501] 54.143 |
| Pfam |
BC-like_N (IPR005481) - T[57-162] 3.9E-42 |
| Pfam |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[168-375] 2.6E-74 |
| ProSiteProfiles |
ATP-grasp (IPR011761) - T[172-369] 49.815 |
| ProSitePatterns |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[338-345] . |
| SUPERFAMILY |
Rudment_hybrid_motif (IPR011054) - T[385-503] 8.37E-39 |
| Pfam |
Biotin_COase_C (IPR005482) - T[390-498] 1.1E-34 |
| SMART |
Biotin_COase_C (IPR005482) - T[390-497] 2.9E-51 |
| ProSiteProfiles |
Biotin_lipoyl (IPR000089) - T[659-734] 22.952 |
| SUPERFAMILY |
Single_hybrid_motif (IPR011053) - T[661-733] 5.89E-17 |
| Pfam |
Biotin_lipoyl (IPR000089) - T[670-733] 5.3E-14 |
| ProSitePatterns |
Biotin_BS (IPR001882) - T[690-707] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PCCA_HUMAN | 41.474 % | 466 | 7.42E-155 |
| PYC_HUMAN | 41.968 % | 367 | 1.13E-112 |
| MCCA_HUMAN | 56.835 % | 775 | 0 |
