- Transcript 'KH2012:KH.C7.212.v1....'
Transcript Model
Transcript Id
KH2012:KH.C7.212.v1.A.nonSL4-1
Possible name(s)
MCCC1; PC; PCCA
Gene model
Location
KhC7 [5,729,944 / 5,738,956]
Amino acid sequence
Length: 741
>KH.C7.212.v1.A.nonSL4-1
KSDCYVKNKMLQITRTAIFSRFRWRRVRNSAECVNFVPNYRRYSSHPVEINENVKETQIS
KLLIANRGEIACRVMKTAKNMGISTVAVYSEVDRSQMHVQMADEAFCIGDEQGYLGMDGI
LNVAKDAGAEAIHPGYGFLSENAEFAELCSSNGVIFVGPPPSAIRDMGIKSTSKRIMSAA
NVPIIEGYHGDEQSDSRLLEEADRIGFPVMIKAVRGGGGKGMRIATSRDVFLEQLSSARS
EAIKSFGDDVMLVEKYVDRPRHVEVQVFGDHHGNAVHLFERDCSVQRRHQKVIEESPAPG
ISLRTRTNLGEAAVRAARAVGYVGAGTVEFVMDPQQNFYFMEMNTRLQVEHPVTEMVTGT
DLVEWQLLVAQGHPLPSTQQEICDRTRGHAFEARIYAEDPDDDFMPRAGPLIHLSAPKVT
PNTRVETGVRQGDVVSHYYDPMIAKLVVWGKDRGSALRGLVRGLGEYSVVGLDTNIKFLQ
RLALHPSFKAGDVHTGFIEQHNEALFPNKPTKISPHAACRAALGYLLLEETPNTQDPFVE
CSNFQVNIPSPRTIELTVGDCDVIVVITPLSDGKYSMNVNGDVTNENNDMIVSGSLTKDI
MTSSMNLKTTIDDITTSEKMVFIPGESHVRFSDPDSIHLYPTNGEESLKFSLPLPKYLSE
FATSGVSGDPMAPMVGEIQKVLVAPGEEVAQGQPLVVMIAMKMEHTIRSPRDGVVESVHV
AAKDNVARFDVLVKLVPEEEE
Nucleotide sequence
Length: 2,448
>KH2012:KH.C7.212.v1.A.nonSL4-1
AAGAGTGATTGTTACGTCAAAAACAAAATGCTGCAAATTACGAGAACAGCGATTTTTAGC
CGTTTTCGGTGGCGTAGAGTCCGTAATAGTGCAGAATGTGTTAATTTTGTGCCAAATTAT
CGTCGGTATTCAAGCCACCCAGTTGAAATAAACGAAAATGTCAAAGAAACACAAATTTCA
AAACTTCTTATCGCGAACCGGGGAGAAATCGCGTGTCGGGTAATGAAGACGGCGAAAAAC
ATGGGTATTAGCACTGTAGCAGTGTACAGTGAAGTAGATAGATCACAGATGCATGTCCAG
ATGGCTGATGAAGCTTTCTGTATTGGAGATGAACAAGGTTACTTAGGAATGGATGGTATA
TTGAATGTAGCGAAAGACGCTGGAGCCGAAGCCATCCACCCAGGTTATGGATTTCTGTCG
GAAAACGCAGAGTTTGCCGAGTTATGTTCAAGCAATGGAGTCATATTTGTTGGCCCGCCC
CCTTCTGCTATCCGAGACATGGGGATTAAAAGTACTTCGAAGAGAATAATGTCTGCAGCT
AATGTTCCAATTATTGAAGGTTACCATGGTGATGAGCAGTCGGACTCACGCCTCCTTGAA
GAAGCGGATCGGATCGGGTTCCCTGTGATGATAAAAGCTGTAAGAGGAGGTGGAGGGAAG
GGAATGAGAATCGCAACATCCAGGGATGTCTTCTTGGAGCAATTATCGTCCGCAAGGAGC
GAAGCGATCAAGTCGTTCGGCGACGATGTGATGTTGGTAGAGAAATATGTGGATCGACCG
AGGCATGTAGAGGTTCAGGTGTTCGGAGACCACCATGGCAACGCTGTCCACTTATTCGAG
CGCGACTGTAGTGTCCAACGTCGGCATCAGAAAGTTATTGAAGAGTCCCCAGCCCCGGGT
ATTTCCCTTCGCACCCGTACCAACCTGGGTGAAGCCGCTGTCCGTGCAGCGAGGGCAGTG
GGTTACGTCGGGGCAGGGACGGTGGAGTTTGTGATGGACCCCCAACAAAACTTCTACTTC
ATGGAGATGAACACGAGGTTACAGGTAGAACACCCAGTCACAGAAATGGTAACAGGGACA
GACTTGGTTGAGTGGCAATTATTGGTAGCACAAGGACATCCTTTACCATCAACCCAGCAA
GAAATATGCGATCGAACACGAGGTCATGCTTTTGAAGCGAGGATATATGCTGAAGACCCT
GACGATGACTTCATGCCCCGAGCCGGACCCCTAATCCATCTATCGGCCCCAAAAGTCACC
CCGAACACCCGCGTCGAGACTGGGGTCCGCCAGGGTGACGTGGTATCCCATTACTACGAC
CCTATGATCGCAAAGCTAGTCGTTTGGGGCAAAGACAGGGGTTCTGCGCTGCGAGGGTTA
GTTAGGGGTCTGGGTGAATATTCTGTGGTTGGATTAGACACAAACATCAAGTTTTTACAA
CGACTTGCTCTTCACCCAAGCTTCAAGGCTGGTGACGTACACACTGGGTTTATTGAACAA
CACAACGAAGCATTGTTTCCAAACAAACCCACGAAAATATCACCTCATGCTGCTTGCCGC
GCTGCACTAGGGTATTTACTTCTAGAAGAAACACCTAACACTCAAGATCCATTTGTAGAA
TGTTCCAATTTTCAAGTCAATATCCCGAGTCCGAGAACAATAGAGCTGACAGTGGGTGAT
TGTGATGTCATAGTGGTCATTACTCCCCTTAGTGACGGAAAATACTCAATGAATGTGAAT
GGTGATGTCACAAACGAAAACAATGACATGATTGTCTCGGGTTCGCTAACAAAGGACATT
ATGACATCATCAATGAATTTAAAAACAACCATTGATGACATCACAACCAGCGAGAAAATG
GTGTTTATCCCTGGAGAGTCTCACGTCAGGTTTTCCGACCCAGATTCGATCCATCTTTAC
CCGACAAACGGAGAAGAGTCTTTAAAGTTTTCGCTCCCGTTGCCGAAATACCTCAGCGAG
TTTGCGACATCAGGAGTGTCGGGCGACCCGATGGCCCCCATGGTGGGCGAGATACAGAAG
GTGCTGGTGGCACCCGGTGAAGAGGTGGCTCAAGGGCAACCCCTAGTGGTGATGATAGCG
ATGAAGATGGAACACACGATACGCTCGCCACGCGATGGGGTGGTGGAGTCGGTTCACGTC
GCAGCGAAAGATAACGTCGCGCGTTTCGATGTGTTGGTTAAACTTGTGCCAGAAGAAGAA
GAATAGATTTTATGATGTTATTGTGTCACTTGTGATGTCATATTGTTAATTTATGATGTT
GTATTGCTATTTAATGATGTCATAATGTTCCTCTATGACACTATTGTGATACATTATGAT
GTTAGTGTGATGTTATGAAGAAATTGTGTCACTTTATGATTTGGAACTTGACATTTACTG
CATCAAACTTGGTAAACAGTGATGCAATTACACACATTATGTCTCGTT
| SUPERFAMILY |
PreATP-grasp_dom_sf (IPR016185) - T[50-167] 1.22E-46 |
| ProSiteProfiles |
Biotin_carboxylation_dom (IPR011764) - T[58-503] 54.143 |
| Pfam |
BC-like_N (IPR005481) - T[59-164] 3.9E-42 |
| Pfam |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[170-377] 2.6E-74 |
| ProSiteProfiles |
ATP-grasp (IPR011761) - T[174-371] 49.815 |
| ProSitePatterns |
CbamoylP_synth_lsu-like_ATP-bd (IPR005479) - T[340-347] . |
| SUPERFAMILY |
Rudment_hybrid_motif (IPR011054) - T[387-505] 8.37E-39 |
| SMART |
Biotin_COase_C (IPR005482) - T[392-499] 2.9E-51 |
| Pfam |
Biotin_COase_C (IPR005482) - T[392-500] 1.1E-34 |
| ProSiteProfiles |
Biotin_lipoyl (IPR000089) - T[661-736] 22.952 |
| SUPERFAMILY |
Single_hybrid_motif (IPR011053) - T[663-735] 6.02E-17 |
| Pfam |
Biotin_lipoyl (IPR000089) - T[672-735] 5.3E-14 |
| ProSitePatterns |
Biotin_BS (IPR001882) - T[692-709] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PCCA_HUMAN | 41.474 % | 467 | 6.72E-155 |
| PYC_HUMAN | 41.968 % | 368 | 1.08E-112 |
| MCCA_HUMAN | 56.835 % | 775 | 0 |
