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  1. Transcript 'KH2012:KH.C7.172.v1....'

Transcript Model

Transcript Id

KH2012:KH.C7.172.v1.A.SL3-1

Possible name(s)

MKRN1; MKRN2; MKRN3

Location

KhC7 [3,613,319 / 3,621,256]

Sequences

Amino acid sequence

Length: 440

>KH.C7.172.v1.A.SL3-1
SLIVCSVKFGSKHHRRNQDNKPKMASSGQNTPCHNSQPWTKKVLCRYFLHGACKFGSECS
YSHDTKAQANMVCRYYQSGHCSYGDRCRYDHIKPDKGRKTIKAKYPTDSIIIDSTKYENS
LTGADWANAVEFVPGKEYSPRTSNTYSSALKEGLESSTSTDKYNDLCPFALNGECVNGEN
CAYVHGLLCDMCCLYILHPSDVLQQEKHKEECIKYHEEDMLESFKVAESREIACGICMEV
VWEKADEKDRKFGILENCNHTFCLDCIRKWRSAKAFNNTVVKACPQCRVSSSFVTPSERW
IEDKEEKKKLIQGYKDHLSNKACKYFDQGRGKCPFGANCFYLHAYSDGRKQDRSKIQTRN
VVDSNGRAGHLDLNTIWDMLGDEDSHAEDHARLMNLLDDDADLFDLFYLLGDDTMSSGDE
YSFEYPYHYNGGEDFFTDSD

Nucleotide sequence

Length: 3,068

>KH2012:KH.C7.172.v1.A.SL3-1
GTAGTTTGATAGTTTGCTCTGTCAAGTTTGGTTCAAAACACCACAGAAGAAATCAAGATA
ATAAACCAAAGATGGCCTCGTCAGGACAAAACACACCTTGTCACAACAGTCAGCCTTGGA
CAAAAAAAGTTTTATGCAGATACTTCCTACATGGAGCTTGTAAATTTGGTTCTGAATGCT
CGTATTCACATGACACTAAAGCTCAAGCCAATATGGTGTGTCGTTATTATCAATCTGGAC
ATTGTTCATACGGTGACCGTTGCAGATACGATCATATAAAACCAGACAAGGGGCGGAAAA
CTATTAAAGCAAAGTATCCTACTGACAGCATCATTATCGACTCAACAAAATATGAGAACT
CATTGACTGGTGCTGATTGGGCAAACGCTGTCGAGTTTGTTCCAGGAAAAGAATATTCAC
CGAGAACTTCAAACACATACAGCTCTGCTTTAAAAGAAGGACTTGAGTCATCAACCTCAA
CAGATAAATATAACGATTTGTGCCCATTCGCTCTCAACGGTGAATGTGTGAACGGCGAAA
ATTGTGCATATGTTCATGGCTTGTTGTGTGATATGTGTTGTCTGTACATTCTGCATCCAA
GTGATGTTTTACAGCAGGAAAAGCACAAAGAGGAATGCATTAAATACCATGAAGAGGACA
TGCTTGAATCGTTTAAAGTTGCTGAAAGCAGGGAAATTGCGTGTGGAATATGCATGGAAG
TGGTTTGGGAAAAAGCAGATGAAAAAGACCGAAAGTTTGGGATTTTGGAAAACTGTAATC
ATACTTTTTGTTTGGATTGCATTAGAAAGTGGAGAAGTGCCAAAGCGTTTAACAATACTG
TTGTAAAAGCATGTCCACAATGTCGAGTGTCGTCATCATTCGTCACCCCAAGTGAACGCT
GGATTGAAGATAAGGAAGAAAAAAAGAAGCTAATTCAAGGATATAAAGATCATCTCAGCA
ACAAAGCGTGCAAGTATTTCGACCAGGGTCGCGGAAAATGTCCGTTTGGTGCAAATTGTT
TCTATTTGCACGCATACAGTGACGGTAGAAAGCAAGACCGAAGTAAAATACAAACAAGAA
ATGTTGTGGATAGCAATGGTAGAGCAGGGCACCTTGATTTGAACACTATATGGGACATGC
TTGGTGATGAAGACAGCCACGCGGAGGATCACGCTCGCCTCATGAACCTCCTGGATGACG
ATGCCGATCTTTTCGATCTCTTTTATCTTCTCGGTGACGATACAATGTCATCAGGAGACG
AATACTCGTTCGAATATCCTTACCACTACAATGGGGGGGAGGATTTTTTCACTGATTCTG
ACTGAGTTGAGGATTCTTGTTTCAGTGTAAATACGTTGTATTGTGTTTGTGTGCTCTTGT
GGCCGTCATAGCTTTTGCTTAACTCTATGGACAAGACAACAACTGGAGATTTTATCTGGG
AAATTTCAGAATAAACTCATGGATATGAAGCGTGAAAAAAGGCACCATGGATGACAGAAT
CACGTGATTAAACTGGTTTTCGCACACCTGGTGTTGGAAGTTGGAGGCTGTACTACTAAA
TATTTTTAAGCTCACGAATATGAAAAGCGTGAAAAAAAGGGAACACGAATGAAGGATCAC
GTGATTGAACTGGTTTTTACACACCTGGTGTTCTGAAATGGAATTCGAGGCTGTACTACT
AAATATTCCTGCAAACTGTGTCTCAAATTAAGTTTACCTATGCATACCACTCTGGGTGAT
AATGATAAATTAATCCGTGCTCCCCCTAAGCAAATTTCACTGTGCCCAAGTTCTCAGATT
TAATTTTAAATGTGCCTTTCATTTTCTTAATAACTCTGGTGTGGTTATCTTCAAGTTCAT
ACATAAAATGCATCGAAACAAAAATGGCAACTGACCAGTATAAACGGATGCCTAGTTAAA
ATACAACTGATGCAATATATGGTTTTCTTTTTTTCCTTAATTTATGATTTCAAATTTATT
CCCGATTTTAACCTGTTCCTGTTTTAAACCAACACTTCGCAATCAAACTTTTTCCTTTAT
TTTAAAAAACCAAGCCTAACAAAGGCTTTGTAGATATTTAAAACTACATTGGGTAAAATT
GAACCTGACCTCTTTCTATTTATTTGAAGTGCAACTCCCAATTTTCTTGCAATTATTGAA
ACCCATTTCGTTTACCGCCAGTGTTAATATGTTGCATTCCCCGCTTAGGCAATTGATATA
ACTAGTACACATATGAAACATATCAACAGTTACTACCCTTAAGAAAGCCATAGCAGCTTT
ATCTTATTAGTAAAACCAATGTATCATAGATTTACATTTCTGGTCTTTTCCATGCTATAC
CTAATACATTTATCTTCATATTCAATTTTCTTTGGTAAATATGTCGACAAATTGATTTTA
ATATTTGCACAAGCATTCATTATTTGTCTTCACACTAAATACCAGCAGTGCGTCGCAGAA
TGCATTTTTCATTTAAAGTCATTTTATTGTTTTTAAATTAAGCCACAAAAGTTGCAATAA
TCAATTATACAACCTATGTGGAAAAATGCAGCTTGACTGATTTCTATTTAATTGCCTTTT
CTCTCGCAGACTGTCACTGTGAGAAAACAAACAAAAAAATAGTTTAAAAACCCACTTAAA
CAGCACTGTGATCTGGTTACTTTGTCAAATCTTTCACCTAGCTCAAAATCCTTCCATTTC
GAAGATATTTTTTTATGGTACGCATGCTAGCACGCACTGCTGGAACCAACTGTTTTGTTC
AATTTTCAATTTTTAAAAAAGCTTTCTTAATATTTTACCACTATTGTTCCCTCTTTGCCA
CTGGCCACATAGCAACAAACCCCCTTTGTAGAAAATTGTATGTTATAAAATGCCAGTGTG
GAAGCATACGGTCACAAGTATTGTATTATATTGTGTGATATTGTATTCTTGTATATTTGT
TTTTACGAACAGCAACACAAGGGTGTTTGAAATCAAATTTGTTGATTAATTCTTATTTAC
TAAAAGGATAAATGCTTGGTGAATGAATTGGTGCCAATGTGGGCAAATGATCAATAAAAG
AAGTTTGG

InterProScan

SMART
Znf_CCCH (IPR000571) - T[39-65] 1.9E-6 - T[68-93] 2.5E-4 - T[162-187] 0.0026 - T[319-345] 0.0032
ProSiteProfiles
Znf_CCCH (IPR000571) - T[39-66] 16.389 - T[67-94] 15.422 - T[161-188] 12.267 - T[318-346] 13.291
SUPERFAMILY
Znf_CCCH_sf (IPR036855) - T[40-64] 1.96E-6 - T[70-91] 1.28E-5 - T[161-186] 1.19E-5
Pfam
Znf_CCCH (IPR000571) - T[41-64] 2.5E-6 - T[73-91] 1.2E-5
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[208-321] 3.6E-11
ProSiteProfiles
Znf_RING (IPR001841) - T[234-288] 12.371
Pfam
Znf_C3HC4_RING-type (IPR018957) - T[234-287] 2.2E-7
SMART
Znf_RING (IPR001841) - T[234-287] 1.1E-7
ProSitePatterns
Znf_RING_CS (IPR017907) - T[258-267] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MKRN1_HUMAN 42.597 % 358 2.45E-120
MKRN4_HUMAN 45.679 % 353 4.6E-118
MKRN2_HUMAN 38.257 % 300 2.72E-98